RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 XPO6Q96QU8 1125 aaKnown RBP9.09□□□□□ -0.95
CDC42SE1-204ENST00000483763 SEPT5Q99719 369 aaPredicted RBP9.09□□□□□ -0.95
CDC42SE1-204ENST00000483763 TTPALQ9BTX7 342 aa9.09□□□□□ -0.95
CDC42SE1-204ENST00000483763 PHACTR1Q9C0D0 580 aa9.09□□□□□ -0.95
CDC42SE1-204ENST00000483763 EPN3Q9H201 632 aa9.09□□□□□ -0.95
CDC42SE1-204ENST00000483763 CWH43Q9H720 699 aa9.09□□□□□ -0.95
CDC42SE1-204ENST00000483763 IL37Q9NZH6 218 aa9.09□□□□□ -0.95
CDC42SE1-204ENST00000483763 FNDC1Q4ZHG4 1894 aaPredicted RBP9.09□□□□□ -0.95
CDC42SE1-204ENST00000483763 TANC1Q9C0D5 1861 aa9.09□□□□□ -0.95
CDC42SE1-204ENST00000483763 A0A1W2PPM1 405 aa9.09□□□□□ -0.95
CDC42SE1-204ENST00000483763 TMEM120BA0PK00 339 aa9.09□□□□□ -0.95
CDC42SE1-204ENST00000483763 FAM92AA1XBS5 289 aa9.09□□□□□ -0.95
CDC42SE1-204ENST00000483763 WDR27A2RRH5 827 aa9.09□□□□□ -0.95
CDC42SE1-204ENST00000483763 TRIM43BA6NCK2 446 aa9.09□□□□□ -0.95
CDC42SE1-204ENST00000483763 OR6C75A6NL08 312 aa9.09□□□□□ -0.95
CDC42SE1-204ENST00000483763 HACD1B0YJ81 288 aa9.09□□□□□ -0.95
CDC42SE1-204ENST00000483763 SMAPO00193 183 aa9.09□□□□□ -0.95
CDC42SE1-204ENST00000483763 PARNO95453 639 aaKnown RBP9.09□□□□□ -0.95
CDC42SE1-204ENST00000483763 MOCS2O96007 188 aaPredicted RBP9.09□□□□□ -0.95
CDC42SE1-204ENST00000483763 PTPN3P26045 913 aa9.09□□□□□ -0.95
CDC42SE1-204ENST00000483763 PSMB4P28070 264 aa9.09□□□□□ -0.95
CDC42SE1-204ENST00000483763 CCR1P32246 355 aa9.09□□□□□ -0.95
CDC42SE1-204ENST00000483763 CRADDP78560 199 aa9.09□□□□□ -0.95
CDC42SE1-204ENST00000483763 TAF10Q12962 218 aa9.09□□□□□ -0.95
CDC42SE1-204ENST00000483763 SEMA5AQ13591 1074 aa9.09□□□□□ -0.95
CDC42SE1-204ENST00000483763 RWDD4Q6NW29 188 aaKnown RBP9.09□□□□□ -0.95
CDC42SE1-204ENST00000483763 FAM117BQ6P1L5 589 aa9.09□□□□□ -0.95
CDC42SE1-204ENST00000483763 ARHGEF18Q6ZSZ5 1173 aa9.09□□□□□ -0.95
CDC42SE1-204ENST00000483763 C14orf80Q86SX3 495 aa9.09□□□□□ -0.95
CDC42SE1-204ENST00000483763 PALM2Q8IXS6 379 aa9.09□□□□□ -0.95
CDC42SE1-204ENST00000483763 TRIM43Q96BQ3 446 aaPredicted RBP9.09□□□□□ -0.95
CDC42SE1-204ENST00000483763 SIGLEC10Q96LC7 697 aa9.09□□□□□ -0.95
CDC42SE1-204ENST00000483763 FAM107BQ9H098 131 aa9.09□□□□□ -0.95
CDC42SE1-204ENST00000483763 OSBPL2Q9H1P3 480 aa9.09□□□□□ -0.95
CDC42SE1-204ENST00000483763 IGSF5Q9NSI5 407 aa9.09□□□□□ -0.95
CDC42SE1-204ENST00000483763 XIRP2A4UGR9 3374 aa9.09□□□□□ -0.95
CDC42SE1-204ENST00000483763 COL4A6Q14031 1691 aa9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 RASA4BC9J798 803 aa9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 C2CD2LO14523 706 aa9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 NDC80O14777 642 aa9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 TRIM66O15016 1216 aa9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 RASA4O43374 803 aa9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 BRAFP15056 766 aa9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 ATF6P18850 670 aa9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 CD68P34810 354 aaPredicted RBP9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 GARSP41250 739 aaKnown RBP9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 MAGEA11P43364 429 aa9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 ALDH7A1P49419 539 aaKnown RBP9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 DEFB103AP81534 67 aa9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 PPIDQ08752 370 aaKnown RBP9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 ZBTB17Q13105 803 aa9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 IKBKEQ14164 716 aa9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 KBTBD12Q3ZCT8 623 aa9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 MANEALQ5VSG8 457 aa9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 BZW1Q7L1Q6 419 aaKnown RBP9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 TRABD2AQ86V40 505 aa9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 LRRC43Q8N309 656 aa9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 MCUQ8NE86 351 aa9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 GIPC2Q8TF65 315 aa9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 CCT8L2Q96SF2 557 aa9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 EPAS1Q99814 870 aa9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 PRMT1Q99873 361 aaKnown RBP9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 CCDC77Q9BR77 488 aa9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 DHRS4Q9BTZ2 278 aa9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 MRPL9Q9BYD2 267 aaKnown RBP9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 ACSS3Q9H6R3 686 aa9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 MPP6Q9NZW5 540 aa9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 HS3ST4Q9Y661 456 aa9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 CHD9Q3L8U1 2897 aa9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 CXorf49A8MYA2 514 aaPredicted RBP9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 PPP1R12AO14974 1030 aaPredicted RBP9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 ZBTB24O43167 697 aaPredicted RBP9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 HOXA2O43364 376 aa9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 IVLP07476 585 aa9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 CSF2RAP15509 400 aa9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 RAG1P15918 1043 aa9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 YWHAQP27348 245 aa9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 IFNAR2P48551 515 aa9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 CCT5P48643 541 aa9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 GEMIN4P57678 1058 aaKnown RBP9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 GALNT2Q10471 571 aa9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 CBLBQ13191 982 aa9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 SPARCL1Q14515 664 aa9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 QPCTQ16769 361 aa9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 PIK3R6Q5UE93 754 aa9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 TRMT10BQ6PF06 316 aaKnown RBP9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 PID1Q7Z2X4 250 aa9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 TADA2BQ86TJ2 420 aa9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 TDRPQ86YL5 185 aa9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 MIB1Q86YT6 1006 aa9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 ARHGAP12Q8IWW6 846 aa9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 RNF168Q8IYW5 571 aaPredicted RBP9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 FBXO22Q8NEZ5 403 aa9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 MGARPQ8TDB4 240 aa9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 CFAP36Q96G28 342 aa9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 SLC39A13Q96H72 371 aa9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 AGAP3Q96P47 875 aa9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 HAPLN3Q96S86 360 aa9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 PAFAH2Q99487 392 aa9.08□□□□□ -0.96
CDC42SE1-204ENST00000483763 TMEM175Q9BSA9 504 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms