RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 UCMAQ8WVF2 138 aa13.84□□□□□ -0.19
SSR1-208ENST00000483409 IGSF8Q969P0 613 aa13.84□□□□□ -0.19
SSR1-208ENST00000483409 ZNF653Q96CK0 615 aa13.84□□□□□ -0.19
SSR1-208ENST00000483409 VCPIP1Q96JH7 1222 aa13.84□□□□□ -0.19
SSR1-208ENST00000483409 RPRD1AQ96P16 312 aaPredicted RBP13.84□□□□□ -0.19
SSR1-208ENST00000483409 NYNRINQ9P2P1 1898 aaKnown RBP13.84□□□□□ -0.19
SSR1-208ENST00000483409 ANKRD62A6NC57 917 aa13.83□□□□□ -0.2
SSR1-208ENST00000483409 WASH3PC4AMC7 463 aa13.83□□□□□ -0.2
SSR1-208ENST00000483409 H0Y626 953 aa13.83□□□□□ -0.2
SSR1-208ENST00000483409 CCP110O43303 1012 aa13.83□□□□□ -0.2
SSR1-208ENST00000483409 LILRB5O75023 590 aa13.83□□□□□ -0.2
SSR1-208ENST00000483409 ENDOD1O94919 500 aa13.83□□□□□ -0.2
SSR1-208ENST00000483409 TPM1P09493 284 aa13.83□□□□□ -0.2
SSR1-208ENST00000483409 HOXA6P31267 233 aa13.83□□□□□ -0.2
SSR1-208ENST00000483409 IL12RB1P42701 662 aa13.83□□□□□ -0.2
SSR1-208ENST00000483409 NUMBP49757 651 aa13.83□□□□□ -0.2
SSR1-208ENST00000483409 DGKEP52429 567 aa13.83□□□□□ -0.2
SSR1-208ENST00000483409 EIF4HQ15056 248 aaKnown RBP13.83□□□□□ -0.2
SSR1-208ENST00000483409 FUT11Q495W5 492 aa13.83□□□□□ -0.2
SSR1-208ENST00000483409 FSCBQ5H9T9 825 aa13.83□□□□□ -0.2
SSR1-208ENST00000483409 PPP1R15BQ5SWA1 713 aa13.83□□□□□ -0.2
SSR1-208ENST00000483409 TTC39BQ5VTQ0 682 aaPredicted RBP13.83□□□□□ -0.2
SSR1-208ENST00000483409 MBLAC2Q68D91 279 aa13.83□□□□□ -0.2
SSR1-208ENST00000483409 SDE2Q6IQ49 451 aa13.83□□□□□ -0.2
SSR1-208ENST00000483409 STRADAQ7RTN6 431 aa13.83□□□□□ -0.2
SSR1-208ENST00000483409 TMC6Q7Z403 805 aa13.83□□□□□ -0.2
SSR1-208ENST00000483409 KIAA0907Q7Z7F0 614 aaPredicted RBP13.83□□□□□ -0.2
SSR1-208ENST00000483409 ADIPOR2Q86V24 386 aa13.83□□□□□ -0.2
SSR1-208ENST00000483409 WDR5BQ86VZ2 330 aa13.83□□□□□ -0.2
SSR1-208ENST00000483409 CCAR2Q8N163 923 aaKnown RBP13.83□□□□□ -0.2
SSR1-208ENST00000483409 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.83□□□□□ -0.2
SSR1-208ENST00000483409 ZNF557Q8N988 423 aaPredicted RBP13.83□□□□□ -0.2
SSR1-208ENST00000483409 WFIKKN2Q8TEU8 576 aa13.83□□□□□ -0.2
SSR1-208ENST00000483409 CYB5D2Q8WUJ1 264 aa13.83□□□□□ -0.2
SSR1-208ENST00000483409 NKD2Q969F2 451 aaPredicted RBP13.83□□□□□ -0.2
SSR1-208ENST00000483409 LMLNQ96KR4 655 aa13.83□□□□□ -0.2
SSR1-208ENST00000483409 PARVAQ9NVD7 372 aa13.83□□□□□ -0.2
SSR1-208ENST00000483409 ARHGAP20Q9P2F6 1191 aa13.83□□□□□ -0.2
SSR1-208ENST00000483409 MYO1AQ9UBC5 1043 aa13.83□□□□□ -0.2
SSR1-208ENST00000483409 CNOT8Q9UFF9 292 aaKnown RBP13.83□□□□□ -0.2
SSR1-208ENST00000483409 RAD54BQ9Y620 910 aa13.83□□□□□ -0.2
SSR1-208ENST00000483409 STON1Q9Y6Q2 735 aa13.83□□□□□ -0.2
SSR1-208ENST00000483409 RALGAPA1Q6GYQ0 2036 aa13.83□□□□□ -0.2
SSR1-208ENST00000483409 CEP192Q8TEP8 1941 aa13.82□□□□□ -0.2
SSR1-208ENST00000483409 PLXND1Q9Y4D7 1925 aa13.82□□□□□ -0.2
SSR1-208ENST00000483409 THADAQ6YHU6 1953 aa13.82□□□□□ -0.2
SSR1-208ENST00000483409 SDK1Q7Z5N4 2213 aa13.82□□□□□ -0.2
SSR1-208ENST00000483409 A0A087X0T9 212 aa13.82□□□□□ -0.2
SSR1-208ENST00000483409 A0A1B0GVM2 712 aa13.82□□□□□ -0.2
SSR1-208ENST00000483409 TCRBV21S2A2A0A5A6 115 aa13.82□□□□□ -0.2
SSR1-208ENST00000483409 TCAF2A6NFQ2 919 aa13.82□□□□□ -0.2
SSR1-208ENST00000483409 PROB1E7EW31 1015 aa13.82□□□□□ -0.2
SSR1-208ENST00000483409 AXIN1O15169 862 aa13.82□□□□□ -0.2
SSR1-208ENST00000483409 FAM228BP0C875 321 aa13.82□□□□□ -0.2
SSR1-208ENST00000483409 POLR2EP19388 210 aaKnown RBP13.82□□□□□ -0.2
SSR1-208ENST00000483409 HNRNPH3P31942 346 aaKnown RBP13.82□□□□□ -0.2
SSR1-208ENST00000483409 ZNF143P52747 638 aaPredicted RBP13.82□□□□□ -0.2
SSR1-208ENST00000483409 ADKP55263 362 aaKnown RBP13.82□□□□□ -0.2
SSR1-208ENST00000483409 HDAC4P56524 1084 aa13.82□□□□□ -0.2
SSR1-208ENST00000483409 OGDHQ02218 1023 aa13.82□□□□□ -0.2
SSR1-208ENST00000483409 MAMLD1Q13495 774 aa13.82□□□□□ -0.2
SSR1-208ENST00000483409 ZNF234Q14588 700 aa13.82□□□□□ -0.2
SSR1-208ENST00000483409 PLEKHA7Q6IQ23 1121 aa13.82□□□□□ -0.2
SSR1-208ENST00000483409 KIAA1211LQ6NV74 962 aa13.82□□□□□ -0.2
SSR1-208ENST00000483409 ASCL5Q7RTU5 278 aa13.82□□□□□ -0.2
SSR1-208ENST00000483409 MDGA1Q8NFP4 955 aa13.82□□□□□ -0.2
SSR1-208ENST00000483409 OR8K1Q8NGG5 319 aa13.82□□□□□ -0.2
SSR1-208ENST00000483409 HMGB4Q8WW32 186 aa13.82□□□□□ -0.2
SSR1-208ENST00000483409 CENPIQ92674 756 aaPredicted RBP13.82□□□□□ -0.2
SSR1-208ENST00000483409 HAPLN3Q96S86 360 aa13.82□□□□□ -0.2
SSR1-208ENST00000483409 DNAJC7Q99615 494 aa13.82□□□□□ -0.2
SSR1-208ENST00000483409 TPSD1Q9BZJ3 242 aa13.82□□□□□ -0.2
SSR1-208ENST00000483409 ISCUQ9H1K1 167 aa13.82□□□□□ -0.2
SSR1-208ENST00000483409 POLMQ9NP87 494 aaPredicted RBP13.82□□□□□ -0.2
SSR1-208ENST00000483409 TMEM51Q9NW97 253 aa13.82□□□□□ -0.2
SSR1-208ENST00000483409 BCCIPQ9P287 314 aaKnown RBP eCLIP13.82□□□□□ -0.2
SSR1-208ENST00000483409 THAP10Q9P2Z0 257 aaPredicted RBP13.82□□□□□ -0.2
SSR1-208ENST00000483409 ABCA7Q8IZY2 2146 aa13.81□□□□□ -0.2
SSR1-208ENST00000483409 CCDC163A0A0D9SF12 145 aa13.81□□□□□ -0.2
SSR1-208ENST00000483409 A0A1W2PQF6 199 aa13.81□□□□□ -0.2
SSR1-208ENST00000483409 E9PAM4 449 aa13.81□□□□□ -0.2
SSR1-208ENST00000483409 HRO43593 1189 aa13.81□□□□□ -0.2
SSR1-208ENST00000483409 TIMM44O43615 452 aa13.81□□□□□ -0.2
SSR1-208ENST00000483409 SRGAP2O75044 1071 aa13.81□□□□□ -0.2
SSR1-208ENST00000483409 MFAP3LO75121 409 aa13.81□□□□□ -0.2
SSR1-208ENST00000483409 CNTN5O94779 1100 aa13.81□□□□□ -0.2
SSR1-208ENST00000483409 ALDH1A2O94788 518 aa13.81□□□□□ -0.2
SSR1-208ENST00000483409 PRKCHP24723 683 aa13.81□□□□□ -0.2
SSR1-208ENST00000483409 EIF4A3P38919 411 aaKnown RBP13.81□□□□□ -0.2
SSR1-208ENST00000483409 MRE11P49959 708 aa13.81□□□□□ -0.2
SSR1-208ENST00000483409 TSR1Q2NL82 804 aaKnown RBP13.81□□□□□ -0.2
SSR1-208ENST00000483409 ARL13BQ3SXY8 428 aa13.81□□□□□ -0.2
SSR1-208ENST00000483409 FNDC3BQ53EP0 1204 aaKnown RBP13.81□□□□□ -0.2
SSR1-208ENST00000483409 ALFQ53S48 1182 aa13.81□□□□□ -0.2
SSR1-208ENST00000483409 CXorf57Q6NSI4 855 aaKnown RBP13.81□□□□□ -0.2
SSR1-208ENST00000483409 SERPINA13PQ6UXR4 307 aa13.81□□□□□ -0.2
SSR1-208ENST00000483409 PRR23BQ6ZRT6 265 aa13.81□□□□□ -0.2
SSR1-208ENST00000483409 ALYREFQ86V81 257 aaKnown RBP13.81□□□□□ -0.2
SSR1-208ENST00000483409 ZNF683Q8IZ20 524 aa13.81□□□□□ -0.2
SSR1-208ENST00000483409 CCDC185Q8N715 623 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms