RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 HEG1Q9ULI3 1381 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 A0A0B4J269 797 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 TRIM64A6NGJ6 449 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 H0YIN7 160 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 LINC01387J3KSC0 135 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 KLF11O14901 512 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 ZMPSTE24O75844 475 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 KCNK2O95069 426 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 RFC4P35249 363 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 MSX2P35548 267 aaPredicted RBP8.01□□□□□ -1.13
COL4A5-205ENST00000483338 IL15P40933 162 aaPredicted RBP8.01□□□□□ -1.13
COL4A5-205ENST00000483338 CRKLP46109 303 aaKnown RBP8.01□□□□□ -1.13
COL4A5-205ENST00000483338 CETN1Q12798 172 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 CDC20Q12834 499 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 TUBB3Q13509 450 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 CLEC16AQ2KHT3 1053 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 ATG16L1Q676U5 607 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 FRMD7Q6ZUT3 714 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 SH3BP5LQ7L8J4 393 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 DEFB132Q7Z7B7 95 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 USP37Q86T82 979 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 ZCCHC9Q8N567 271 aaKnown RBP8.01□□□□□ -1.13
COL4A5-205ENST00000483338 PDPRQ8NCN5 879 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 OR2T3Q8NH03 318 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 HTRA1Q92743 480 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 MTMR9Q96QG7 549 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 CSF3RQ99062 836 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 GPBP1L1Q9HC44 474 aaPredicted RBP8.01□□□□□ -1.13
COL4A5-205ENST00000483338 SIX2Q9NPC8 291 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 WDR70Q9NW82 654 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 IP6K2Q9UHH9 426 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 PTPRFP10586 1907 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 ATRNO75882 1429 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 RNF103O00237 685 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 VWA5AO00534 786 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 AREL1O15033 823 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 LPXNO60711 386 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 RNASEH2AO75792 299 aaKnown RBP8.01□□□□□ -1.13
COL4A5-205ENST00000483338 GNAO1P09471 354 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 ADD2P35612 726 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 KRT20P35900 424 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 TNNI2P48788 182 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 BST1Q10588 318 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 PDIA6Q15084 440 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 ZFP1Q6P2D0 407 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 ATG14Q6ZNE5 492 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 MFSD6Q6ZSS7 791 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 SYNE4Q8N205 404 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 ZFP90Q8TF47 636 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 REXO5Q96IC2 774 aaKnown RBP8.01□□□□□ -1.13
COL4A5-205ENST00000483338 CEP170P1Q96L14 293 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 LPIN3Q9BQK8 851 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 MECRQ9BV79 373 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 SLC4A5Q9BY07 1137 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 WDR12Q9GZL7 423 aaKnown RBP8.01□□□□□ -1.13
COL4A5-205ENST00000483338 CPNE5Q9HCH3 593 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 MAT2BQ9NZL9 334 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 SERPINB13Q9UIV8 391 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 PTBP2Q9UKA9 531 aaKnown RBP8.01□□□□□ -1.13
COL4A5-205ENST00000483338 CPSF3Q9UKF6 684 aaKnown RBP8.01□□□□□ -1.13
COL4A5-205ENST00000483338 ZNF652Q9Y2D9 606 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 PCDHAC2Q9Y5I4 1007 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 LOC100653049A0A140TA62 436 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 EVPLLA8MZ36 301 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 H0YJX3 145 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 CCNKO75909 580 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 KRT34O76011 436 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 MTA2O94776 668 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 MAP3K6O95382 1288 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 KRT8P05787 483 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 IL6STP40189 918 aaPredicted RBP8.01□□□□□ -1.13
COL4A5-205ENST00000483338 CLK1P49759 484 aaKnown RBP8.01□□□□□ -1.13
COL4A5-205ENST00000483338 VAC14Q08AM6 782 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 KCNA1Q09470 495 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 TRPC3Q13507 836 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 MESDQ14696 234 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 KIAA0408Q6ZU52 694 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 SYDE1Q6ZW31 735 aaPredicted RBP8.01□□□□□ -1.13
COL4A5-205ENST00000483338 REXO1Q8N1G1 1221 aaKnown RBP8.01□□□□□ -1.13
COL4A5-205ENST00000483338 TCAIMQ8N3R3 496 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 KCNK16Q96T55 309 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 USB1Q9BQ65 265 aaKnown RBP8.01□□□□□ -1.13
COL4A5-205ENST00000483338 MTG1Q9BT17 334 aaPredicted RBP8.01□□□□□ -1.13
COL4A5-205ENST00000483338 C20orf27Q9GZN8 174 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 SEMA6AQ9H2E6 1030 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 SORCS3Q9UPU3 1222 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 CAB39Q9Y376 341 aaPredicted RBP8.01□□□□□ -1.13
COL4A5-205ENST00000483338 HCN4Q9Y3Q4 1203 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 PCDHGA10Q9Y5H3 936 aa8.01□□□□□ -1.13
COL4A5-205ENST00000483338 MYH9P35579 1960 aaKnown RBP8□□□□□ -1.13
COL4A5-205ENST00000483338 LAMB2P55268 1798 aa8□□□□□ -1.13
COL4A5-205ENST00000483338 FAM155AB1AL88 458 aaPredicted RBP8□□□□□ -1.13
COL4A5-205ENST00000483338 EYA2O00167 538 aa8□□□□□ -1.13
COL4A5-205ENST00000483338 FSCN2O14926 492 aa8□□□□□ -1.13
COL4A5-205ENST00000483338 MAN1A2O60476 641 aa8□□□□□ -1.13
COL4A5-205ENST00000483338 NOL3O60936 208 aaKnown RBP8□□□□□ -1.13
COL4A5-205ENST00000483338 PAHP00439 452 aa8□□□□□ -1.13
COL4A5-205ENST00000483338 EGFRP00533 1210 aa8□□□□□ -1.13
COL4A5-205ENST00000483338 ACAT1P24752 427 aaKnown RBP8□□□□□ -1.13
COL4A5-205ENST00000483338 CYP2C18P33260 490 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms