RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 LRTOMTQ8WZ04 291 aa12.11□□□□□ -0.47
VTI1A-205ENST00000483122 RIT2Q99578 217 aa12.11□□□□□ -0.47
VTI1A-205ENST00000483122 ACO2Q99798 780 aaKnown RBP12.11□□□□□ -0.47
VTI1A-205ENST00000483122 OSBPL11Q9BXB4 747 aa12.11□□□□□ -0.47
VTI1A-205ENST00000483122 HIPK3Q9H422 1215 aa12.11□□□□□ -0.47
VTI1A-205ENST00000483122 CLK4Q9HAZ1 481 aaKnown RBP12.11□□□□□ -0.47
VTI1A-205ENST00000483122 ZNF358Q9NW07 568 aa12.11□□□□□ -0.47
VTI1A-205ENST00000483122 RBAKQ9NYW8 714 aaPredicted RBP12.11□□□□□ -0.47
VTI1A-205ENST00000483122 POLLQ9UGP5 575 aa12.11□□□□□ -0.47
VTI1A-205ENST00000483122 CDH7Q9ULB5 785 aa12.11□□□□□ -0.47
VTI1A-205ENST00000483122 ZNF541Q9H0D2 1346 aa12.11□□□□□ -0.47
VTI1A-205ENST00000483122 SIPA1L1O43166 1804 aa12.11□□□□□ -0.47
VTI1A-205ENST00000483122 LTBP1Q14766 1721 aa12.11□□□□□ -0.47
VTI1A-205ENST00000483122 DDTLA6NHG4 134 aaPredicted RBP12.1□□□□□ -0.47
VTI1A-205ENST00000483122 WDR64B1ANS9 1081 aa12.1□□□□□ -0.47
VTI1A-205ENST00000483122 LSM1O15116 133 aaKnown RBP12.1□□□□□ -0.47
VTI1A-205ENST00000483122 DHX15O43143 795 aaKnown RBP12.1□□□□□ -0.47
VTI1A-205ENST00000483122 GLRA3O75311 464 aa12.1□□□□□ -0.47
VTI1A-205ENST00000483122 MAP3K6O95382 1288 aa12.1□□□□□ -0.47
VTI1A-205ENST00000483122 APRTP07741 180 aa12.1□□□□□ -0.47
VTI1A-205ENST00000483122 ME2P23368 584 aa12.1□□□□□ -0.47
VTI1A-205ENST00000483122 GLDCP23378 1020 aa12.1□□□□□ -0.47
VTI1A-205ENST00000483122 SERPINB9P50453 376 aa12.1□□□□□ -0.47
VTI1A-205ENST00000483122 KPNA1P52294 538 aaPredicted RBP12.1□□□□□ -0.47
VTI1A-205ENST00000483122 JAG1P78504 1218 aa12.1□□□□□ -0.47
VTI1A-205ENST00000483122 DMP1Q13316 513 aaPredicted RBP12.1□□□□□ -0.47
VTI1A-205ENST00000483122 PPM1JQ5JR12 505 aa12.1□□□□□ -0.47
VTI1A-205ENST00000483122 NIPAL1Q6NVV3 410 aa12.1□□□□□ -0.47
VTI1A-205ENST00000483122 CHPT1Q8WUD6 406 aa12.1□□□□□ -0.47
VTI1A-205ENST00000483122 DLG3Q92796 817 aa12.1□□□□□ -0.47
VTI1A-205ENST00000483122 CASP10Q92851 521 aa12.1□□□□□ -0.47
VTI1A-205ENST00000483122 ITPKCQ96DU7 683 aa12.1□□□□□ -0.47
VTI1A-205ENST00000483122 SNX27Q96L92 541 aa12.1□□□□□ -0.47
VTI1A-205ENST00000483122 FERMT1Q9BQL6 677 aa12.1□□□□□ -0.47
VTI1A-205ENST00000483122 CDH19Q9H159 772 aa12.1□□□□□ -0.47
VTI1A-205ENST00000483122 RPF2Q9H7B2 306 aaKnown RBP12.1□□□□□ -0.47
VTI1A-205ENST00000483122 TRPC7Q9HCX4 862 aa12.1□□□□□ -0.47
VTI1A-205ENST00000483122 KCNH7Q9NS40 1196 aa12.1□□□□□ -0.47
VTI1A-205ENST00000483122 TMEM216Q9P0N5 145 aa12.1□□□□□ -0.47
VTI1A-205ENST00000483122 SUN2Q9UH99 717 aa12.1□□□□□ -0.47
VTI1A-205ENST00000483122 GPR25O00155 361 aa12.1□□□□□ -0.47
VTI1A-205ENST00000483122 ACOT8O14734 319 aa12.1□□□□□ -0.47
VTI1A-205ENST00000483122 KCNN4O15554 427 aa12.1□□□□□ -0.47
VTI1A-205ENST00000483122 STAM2O75886 525 aa12.1□□□□□ -0.47
VTI1A-205ENST00000483122 CCDC130P13994 396 aa12.1□□□□□ -0.47
VTI1A-205ENST00000483122 ATP2B4P23634 1241 aa12.1□□□□□ -0.47
VTI1A-205ENST00000483122 ACOT2P49753 483 aa12.1□□□□□ -0.47
VTI1A-205ENST00000483122 NLRP11P59045 1033 aaKnown RBP12.1□□□□□ -0.47
VTI1A-205ENST00000483122 KCNC4Q03721 635 aa12.1□□□□□ -0.47
VTI1A-205ENST00000483122 BNIP3Q12983 259 aa12.1□□□□□ -0.47
VTI1A-205ENST00000483122 NOMO1Q15155 1222 aa12.1□□□□□ -0.47
VTI1A-205ENST00000483122 STXBP5Q5T5C0 1151 aa12.1□□□□□ -0.47
VTI1A-205ENST00000483122 EGFLAMQ63HQ2 1017 aa12.1□□□□□ -0.47
VTI1A-205ENST00000483122 SLC9A4Q6AI14 798 aa12.1□□□□□ -0.47
VTI1A-205ENST00000483122 GPAT2Q6NUI2 795 aa12.1□□□□□ -0.47
VTI1A-205ENST00000483122 PPP1R2P3Q6NXS1 205 aa12.1□□□□□ -0.47
VTI1A-205ENST00000483122 NANOGNBQ7Z5D8 188 aa12.1□□□□□ -0.47
VTI1A-205ENST00000483122 TMEM110Q86TL2 294 aa12.1□□□□□ -0.47
VTI1A-205ENST00000483122 FAM47BQ8NA70 645 aa12.1□□□□□ -0.47
VTI1A-205ENST00000483122 GMCL1P1Q8NEA9 526 aa12.1□□□□□ -0.47
VTI1A-205ENST00000483122 HM13Q8TCT9 377 aa12.1□□□□□ -0.47
VTI1A-205ENST00000483122 TANKQ92844 425 aa12.1□□□□□ -0.47
VTI1A-205ENST00000483122 SIGLEC10Q96LC7 697 aa12.1□□□□□ -0.47
VTI1A-205ENST00000483122 WDR55Q9H6Y2 383 aaPredicted RBP12.1□□□□□ -0.47
VTI1A-205ENST00000483122 ARHGAP28Q9P2N2 729 aa12.1□□□□□ -0.47
VTI1A-205ENST00000483122 COPG2Q9UBF2 871 aa12.1□□□□□ -0.47
VTI1A-205ENST00000483122 VPS28Q9UK41 221 aa12.1□□□□□ -0.47
VTI1A-205ENST00000483122 SLC8A2Q9UPR5 921 aa12.1□□□□□ -0.47
VTI1A-205ENST00000483122 CNTN6Q9UQ52 1028 aa12.1□□□□□ -0.47
VTI1A-205ENST00000483122 CORINQ9Y5Q5 1042 aa12.1□□□□□ -0.47
VTI1A-205ENST00000483122 RGSL1A5PLK6 1076 aa12.09□□□□□ -0.47
VTI1A-205ENST00000483122 H3BMQ9 156 aa12.09□□□□□ -0.47
VTI1A-205ENST00000483122 PIK3R2O00459 728 aa12.09□□□□□ -0.47
VTI1A-205ENST00000483122 NEMP1O14524 444 aa12.09□□□□□ -0.47
VTI1A-205ENST00000483122 GIPC1O14908 333 aa12.09□□□□□ -0.47
VTI1A-205ENST00000483122 C8BP07358 591 aa12.09□□□□□ -0.47
VTI1A-205ENST00000483122 GRK2P25098 689 aa12.09□□□□□ -0.47
VTI1A-205ENST00000483122 TCF7P36402 384 aaPredicted RBP12.09□□□□□ -0.47
VTI1A-205ENST00000483122 PRAMEP78395 509 aa12.09□□□□□ -0.47
VTI1A-205ENST00000483122 CYP2A13Q16696 494 aa12.09□□□□□ -0.47
VTI1A-205ENST00000483122 HADHQ16836 314 aaKnown RBP12.09□□□□□ -0.47
VTI1A-205ENST00000483122 FGD3Q5JSP0 725 aa12.09□□□□□ -0.47
VTI1A-205ENST00000483122 AARS2Q5JTZ9 985 aaKnown RBP12.09□□□□□ -0.47
VTI1A-205ENST00000483122 NAPRTQ6XQN6 538 aa12.09□□□□□ -0.47
VTI1A-205ENST00000483122 SLC7A5P1Q8MH63 180 aa12.09□□□□□ -0.47
VTI1A-205ENST00000483122 SCAIQ8N9R8 606 aa12.09□□□□□ -0.47
VTI1A-205ENST00000483122 COG8Q96MW5 612 aa12.09□□□□□ -0.47
VTI1A-205ENST00000483122 NAA50Q9GZZ1 169 aaKnown RBP12.09□□□□□ -0.47
VTI1A-205ENST00000483122 WDR41Q9HAD4 459 aa12.09□□□□□ -0.47
VTI1A-205ENST00000483122 TCF7L2Q9NQB0 619 aa12.09□□□□□ -0.47
VTI1A-205ENST00000483122 PAK5Q9P286 719 aa12.09□□□□□ -0.47
VTI1A-205ENST00000483122 BCAP29Q9UHQ4 241 aa12.09□□□□□ -0.47
VTI1A-205ENST00000483122 GPC6Q9Y625 555 aaPredicted RBP12.09□□□□□ -0.47
VTI1A-205ENST00000483122 HTRA2O43464 458 aaPredicted RBP12.09□□□□□ -0.47
VTI1A-205ENST00000483122 SULT1C4O75897 302 aa12.09□□□□□ -0.47
VTI1A-205ENST00000483122 NUMBP49757 651 aa12.09□□□□□ -0.47
VTI1A-205ENST00000483122 ZNF132P52740 706 aa12.09□□□□□ -0.47
VTI1A-205ENST00000483122 ESRRGP62508 458 aa12.09□□□□□ -0.47
VTI1A-205ENST00000483122 TAP1Q03518 808 aa12.09□□□□□ -0.47
VTI1A-205ENST00000483122 PRKG1Q13976 671 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms