RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.52□□□□□ -1.85
LAPTM4A-202ENST00000483117 SELENONQ9NZV5 590 aa3.52□□□□□ -1.85
LAPTM4A-202ENST00000483117 MAN2B2Q9Y2E5 1009 aa3.52□□□□□ -1.85
LAPTM4A-202ENST00000483117 A0A1W2PPC4 97 aa3.51□□□□□ -1.85
LAPTM4A-202ENST00000483117 CYSRT1A8MQ03 144 aa3.51□□□□□ -1.85
LAPTM4A-202ENST00000483117 APOL1O14791 398 aa3.51□□□□□ -1.85
LAPTM4A-202ENST00000483117 NPC1O15118 1278 aa3.51□□□□□ -1.85
LAPTM4A-202ENST00000483117 MDM4O15151 490 aa3.51□□□□□ -1.85
LAPTM4A-202ENST00000483117 DHHO43323 396 aa3.51□□□□□ -1.85
LAPTM4A-202ENST00000483117 NFATC1O95644 943 aa3.51□□□□□ -1.85
LAPTM4A-202ENST00000483117 VIPP01282 170 aa3.51□□□□□ -1.85
LAPTM4A-202ENST00000483117 ACAA1P09110 424 aaPredicted RBP3.51□□□□□ -1.85
LAPTM4A-202ENST00000483117 FGF3P11487 239 aaPredicted RBP3.51□□□□□ -1.85
LAPTM4A-202ENST00000483117 IDEP14735 1019 aa3.51□□□□□ -1.85
LAPTM4A-202ENST00000483117 STT3AP46977 705 aa3.51□□□□□ -1.85
LAPTM4A-202ENST00000483117 RFX2P48378 723 aa3.51□□□□□ -1.85
LAPTM4A-202ENST00000483117 PRIM2P49643 509 aa3.51□□□□□ -1.85
LAPTM4A-202ENST00000483117 CBFBQ13951 182 aa3.51□□□□□ -1.85
LAPTM4A-202ENST00000483117 NFATC4Q14934 902 aa3.51□□□□□ -1.85
LAPTM4A-202ENST00000483117 SLC4A8Q2Y0W8 1093 aa3.51□□□□□ -1.85
LAPTM4A-202ENST00000483117 INO80DQ53TQ3 878 aaPredicted RBP3.51□□□□□ -1.85
LAPTM4A-202ENST00000483117 ZNF628Q5EBL2 1059 aa3.51□□□□□ -1.85
LAPTM4A-202ENST00000483117 WASHC2DQ5SRD0 308 aa3.51□□□□□ -1.85
LAPTM4A-202ENST00000483117 PDXDC1Q6P996 788 aa3.51□□□□□ -1.85
LAPTM4A-202ENST00000483117 GLIS1Q8NBF1 620 aa3.51□□□□□ -1.85
LAPTM4A-202ENST00000483117 PPP1R10Q96QC0 940 aaKnown RBP3.51□□□□□ -1.85
LAPTM4A-202ENST00000483117 NUDT22Q9BRQ3 303 aa3.51□□□□□ -1.85
LAPTM4A-202ENST00000483117 ISCUQ9H1K1 167 aa3.51□□□□□ -1.85
LAPTM4A-202ENST00000483117 MAP6D1Q9H9H5 199 aa3.51□□□□□ -1.85
LAPTM4A-202ENST00000483117 DDX21Q9NR30 783 aaKnown RBP eCLIP3.51□□□□□ -1.85
LAPTM4A-202ENST00000483117 FBXO28Q9NVF7 368 aa3.51□□□□□ -1.85
LAPTM4A-202ENST00000483117 PCDHB7Q9Y5E2 793 aa3.51□□□□□ -1.85
LAPTM4A-202ENST00000483117 CKAP5Q14008 2032 aa3.5□□□□□ -1.85
LAPTM4A-202ENST00000483117 FAM234BA2RU67 622 aa3.5□□□□□ -1.85
LAPTM4A-202ENST00000483117 FOXO6A8MYZ6 492 aa3.5□□□□□ -1.85
LAPTM4A-202ENST00000483117 J3KTA2 159 aa3.5□□□□□ -1.85
LAPTM4A-202ENST00000483117 PEPDP12955 493 aa3.5□□□□□ -1.85
LAPTM4A-202ENST00000483117 ENTPD1P49961 510 aa3.5□□□□□ -1.85
LAPTM4A-202ENST00000483117 SHC2P98077 582 aa3.5□□□□□ -1.85
LAPTM4A-202ENST00000483117 CCSAPQ6IQ19 270 aaPredicted RBP3.5□□□□□ -1.85
LAPTM4A-202ENST00000483117 SLC39A5Q6ZMH5 540 aa3.5□□□□□ -1.85
LAPTM4A-202ENST00000483117 USP43Q70EL4 1123 aa3.5□□□□□ -1.85
LAPTM4A-202ENST00000483117 CYB5R4Q7L1T6 521 aa3.5□□□□□ -1.85
LAPTM4A-202ENST00000483117 PAQR4Q8N4S7 273 aaPredicted RBP3.5□□□□□ -1.85
LAPTM4A-202ENST00000483117 SRFBP1Q8NEF9 429 aaKnown RBP3.5□□□□□ -1.85
LAPTM4A-202ENST00000483117 C7orf57Q8NEG2 295 aa3.5□□□□□ -1.85
LAPTM4A-202ENST00000483117 SLC22A17Q8WUG5 538 aa3.5□□□□□ -1.85
LAPTM4A-202ENST00000483117 MCRS1Q96EZ8 462 aa3.5□□□□□ -1.85
LAPTM4A-202ENST00000483117 URB1-AS1Q96HZ7 61 aa3.5□□□□□ -1.85
LAPTM4A-202ENST00000483117 CLMNQ96JQ2 1002 aa3.5□□□□□ -1.85
LAPTM4A-202ENST00000483117 GDF15Q99988 308 aa3.5□□□□□ -1.85
LAPTM4A-202ENST00000483117 KRTAP4-3Q9BYR4 195 aa3.5□□□□□ -1.85
LAPTM4A-202ENST00000483117 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.5□□□□□ -1.85
LAPTM4A-202ENST00000483117 TASP1Q9H6P5 420 aa3.5□□□□□ -1.85
LAPTM4A-202ENST00000483117 IL21RQ9HBE5 538 aa3.5□□□□□ -1.85
LAPTM4A-202ENST00000483117 RGL1Q9NZL6 768 aa3.5□□□□□ -1.85
LAPTM4A-202ENST00000483117 MYO6Q9UM54 1294 aa3.5□□□□□ -1.85
LAPTM4A-202ENST00000483117 CXorf65A6NEN9 183 aa3.49□□□□□ -1.85
LAPTM4A-202ENST00000483117 BECN2A8MW95 431 aa3.49□□□□□ -1.85
LAPTM4A-202ENST00000483117 M0QYT0 321 aa3.49□□□□□ -1.85
LAPTM4A-202ENST00000483117 PODXLO00592 558 aa3.49□□□□□ -1.85
LAPTM4A-202ENST00000483117 ACOT8O14734 319 aa3.49□□□□□ -1.85
LAPTM4A-202ENST00000483117 PRC1O43663 620 aa3.49□□□□□ -1.85
LAPTM4A-202ENST00000483117 PEX14O75381 377 aa3.49□□□□□ -1.85
LAPTM4A-202ENST00000483117 TAF5LO75529 589 aa3.49□□□□□ -1.85
LAPTM4A-202ENST00000483117 PAPSS2O95340 614 aaPredicted RBP3.49□□□□□ -1.85
LAPTM4A-202ENST00000483117 ITGA5P08648 1049 aa3.49□□□□□ -1.85
LAPTM4A-202ENST00000483117 SLC5A1P13866 664 aa3.49□□□□□ -1.85
LAPTM4A-202ENST00000483117 TGM2P21980 687 aa3.49□□□□□ -1.85
LAPTM4A-202ENST00000483117 NSUN2Q08J23 767 aaKnown RBP eCLIP3.49□□□□□ -1.85
LAPTM4A-202ENST00000483117 TTC39AQ5SRH9 613 aa3.49□□□□□ -1.85
LAPTM4A-202ENST00000483117 PARM1Q6UWI2 310 aa3.49□□□□□ -1.85
LAPTM4A-202ENST00000483117 RBM23Q86U06 439 aaKnown RBP3.49□□□□□ -1.85
LAPTM4A-202ENST00000483117 NR2C2APQ86WQ0 139 aa3.49□□□□□ -1.85
LAPTM4A-202ENST00000483117 CCDC146Q8IYE0 955 aa3.49□□□□□ -1.85
LAPTM4A-202ENST00000483117 ADGRF3Q8IZF5 1079 aa3.49□□□□□ -1.85
LAPTM4A-202ENST00000483117 TXLNBQ8N3L3 684 aa3.49□□□□□ -1.85
LAPTM4A-202ENST00000483117 EXD3Q8N9H8 876 aa3.49□□□□□ -1.85
LAPTM4A-202ENST00000483117 ZBTB8BQ8NAP8 495 aaPredicted RBP3.49□□□□□ -1.85
LAPTM4A-202ENST00000483117 ELP5Q8TE02 316 aa3.49□□□□□ -1.85
LAPTM4A-202ENST00000483117 TTC17Q96AE7 1141 aa3.49□□□□□ -1.85
LAPTM4A-202ENST00000483117 C8orf48Q96LL4 319 aa3.49□□□□□ -1.85
LAPTM4A-202ENST00000483117 TBCBQ99426 244 aa3.49□□□□□ -1.85
LAPTM4A-202ENST00000483117 MAGEH1Q9H213 219 aa3.49□□□□□ -1.85
LAPTM4A-202ENST00000483117 PLK2Q9NYY3 685 aa3.49□□□□□ -1.85
LAPTM4A-202ENST00000483117 MDFICQ9P1T7 246 aa3.49□□□□□ -1.85
LAPTM4A-202ENST00000483117 TBC1D14Q9P2M4 693 aa3.49□□□□□ -1.85
LAPTM4A-202ENST00000483117 FAM50BQ9Y247 325 aa3.49□□□□□ -1.85
LAPTM4A-202ENST00000483117 UBE2J1Q9Y385 318 aaPredicted RBP3.49□□□□□ -1.85
LAPTM4A-202ENST00000483117 LMTK3Q96Q04 1460 aa3.48□□□□□ -1.85
LAPTM4A-202ENST00000483117 PNMA6EA0A0J9YXQ4 647 aa3.48□□□□□ -1.85
LAPTM4A-202ENST00000483117 GXYLT2A0PJZ3 443 aa3.48□□□□□ -1.85
LAPTM4A-202ENST00000483117 INAFM1C9JVW0 142 aa3.48□□□□□ -1.85
LAPTM4A-202ENST00000483117 KIF3BO15066 747 aa3.48□□□□□ -1.85
LAPTM4A-202ENST00000483117 HARSP12081 509 aaKnown RBP3.48□□□□□ -1.85
LAPTM4A-202ENST00000483117 CPA1P15085 419 aa3.48□□□□□ -1.85
LAPTM4A-202ENST00000483117 TBX4P57082 545 aa3.48□□□□□ -1.85
LAPTM4A-202ENST00000483117 EGR4Q05215 589 aa3.48□□□□□ -1.85
LAPTM4A-202ENST00000483117 OS9Q13438 667 aaPredicted RBP3.48□□□□□ -1.85
LAPTM4A-202ENST00000483117 BIRC2Q13490 618 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms