RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 SULT1E1P49888 294 aa14.35□□□□□ -0.11
VARS-225ENST00000482996 ST8SIA6P61647 398 aa14.35□□□□□ -0.11
VARS-225ENST00000482996 FMO1Q01740 532 aa14.35□□□□□ -0.11
VARS-225ENST00000482996 KLHL40Q2TBA0 621 aa14.35□□□□□ -0.11
VARS-225ENST00000482996 BRMS1LQ5PSV4 323 aa14.35□□□□□ -0.11
VARS-225ENST00000482996 LYSMD4Q5XG99 296 aa14.35□□□□□ -0.11
VARS-225ENST00000482996 APTXQ7Z2E3 356 aaKnown RBP14.35□□□□□ -0.11
VARS-225ENST00000482996 ERMP1Q7Z2K6 904 aa14.35□□□□□ -0.11
VARS-225ENST00000482996 DGLUCYQ7Z3D6 616 aa14.35□□□□□ -0.11
VARS-225ENST00000482996 METTL3Q86U44 580 aaKnown RBP14.35□□□□□ -0.11
VARS-225ENST00000482996 TMPRSS6Q8IU80 811 aa14.35□□□□□ -0.11
VARS-225ENST00000482996 FRMD1Q8N878 549 aa14.35□□□□□ -0.11
VARS-225ENST00000482996 PIGKQ92643 395 aa14.35□□□□□ -0.11
VARS-225ENST00000482996 PRCCQ92733 491 aaPredicted RBP14.35□□□□□ -0.11
VARS-225ENST00000482996 MYEOVQ96EZ4 313 aa14.35□□□□□ -0.11
VARS-225ENST00000482996 SIPA1Q96FS4 1042 aa14.35□□□□□ -0.11
VARS-225ENST00000482996 NPY6RQ99463 290 aa14.35□□□□□ -0.11
VARS-225ENST00000482996 RTKNQ9BST9 563 aa14.35□□□□□ -0.11
VARS-225ENST00000482996 SLC6A17Q9H1V8 727 aa14.35□□□□□ -0.11
VARS-225ENST00000482996 SMOC1Q9H4F8 434 aa14.35□□□□□ -0.11
VARS-225ENST00000482996 FBRSQ9HAH7 460 aa14.35□□□□□ -0.11
VARS-225ENST00000482996 SUN2Q9UH99 717 aa14.35□□□□□ -0.11
VARS-225ENST00000482996 A0A1B0GVM2 712 aa14.34□□□□□ -0.11
VARS-225ENST00000482996 FAM170AA1A519 330 aa14.34□□□□□ -0.11
VARS-225ENST00000482996 TCAF2A6NFQ2 919 aa14.34□□□□□ -0.11
VARS-225ENST00000482996 NDUFS2O75306 463 aa14.34□□□□□ -0.11
VARS-225ENST00000482996 CYP1A1P04798 512 aaPredicted RBP14.34□□□□□ -0.11
VARS-225ENST00000482996 ACADMP11310 421 aa14.34□□□□□ -0.11
VARS-225ENST00000482996 HLA-EP13747 358 aa14.34□□□□□ -0.11
VARS-225ENST00000482996 CHRNB2P17787 502 aa14.34□□□□□ -0.11
VARS-225ENST00000482996 CSKP41240 450 aa14.34□□□□□ -0.11
VARS-225ENST00000482996 OXCT1P55809 520 aa14.34□□□□□ -0.11
VARS-225ENST00000482996 DEUP1Q05D60 604 aa14.34□□□□□ -0.11
VARS-225ENST00000482996 CAMK2GQ13555 558 aaPredicted RBP14.34□□□□□ -0.11
VARS-225ENST00000482996 SLC12A1Q13621 1099 aa14.34□□□□□ -0.11
VARS-225ENST00000482996 AUHQ13825 339 aaKnown RBP14.34□□□□□ -0.11
VARS-225ENST00000482996 SLC25A52Q3SY17 297 aa14.34□□□□□ -0.11
VARS-225ENST00000482996 C2CD6Q53TS8 623 aa14.34□□□□□ -0.11
VARS-225ENST00000482996 MMS22LQ6ZRQ5 1243 aa14.34□□□□□ -0.11
VARS-225ENST00000482996 ARMCX6Q7L4S7 300 aa14.34□□□□□ -0.11
VARS-225ENST00000482996 DHX40Q8IX18 779 aaKnown RBP14.34□□□□□ -0.11
VARS-225ENST00000482996 OR2T3Q8NH03 318 aa14.34□□□□□ -0.11
VARS-225ENST00000482996 TTC17Q96AE7 1141 aa14.34□□□□□ -0.11
VARS-225ENST00000482996 LMLNQ96KR4 655 aa14.34□□□□□ -0.11
VARS-225ENST00000482996 RPRD1AQ96P16 312 aaPredicted RBP14.34□□□□□ -0.11
VARS-225ENST00000482996 PRMT1Q99873 361 aaKnown RBP14.34□□□□□ -0.11
VARS-225ENST00000482996 MKRN2Q9H000 416 aaKnown RBP14.34□□□□□ -0.11
VARS-225ENST00000482996 TMEM245Q9H330 911 aa14.34□□□□□ -0.11
VARS-225ENST00000482996 WDCPQ9H6R7 721 aa14.34□□□□□ -0.11
VARS-225ENST00000482996 PIGVQ9NUD9 493 aa14.34□□□□□ -0.11
VARS-225ENST00000482996 PLXND1Q9Y4D7 1925 aa14.34□□□□□ -0.11
VARS-225ENST00000482996 SPTBN2O15020 2390 aa14.34□□□□□ -0.11
VARS-225ENST00000482996 SLC30A4O14863 429 aa14.33□□□□□ -0.12
VARS-225ENST00000482996 KHNYNO15037 678 aaKnown RBP14.33□□□□□ -0.12
VARS-225ENST00000482996 GDF9O60383 454 aa14.33□□□□□ -0.12
VARS-225ENST00000482996 PAGE1O75459 146 aa14.33□□□□□ -0.12
VARS-225ENST00000482996 MMP8P22894 467 aa14.33□□□□□ -0.12
VARS-225ENST00000482996 CD6P30203 668 aa14.33□□□□□ -0.12
VARS-225ENST00000482996 OXTRP30559 389 aa14.33□□□□□ -0.12
VARS-225ENST00000482996 HOXD12P35452 270 aa14.33□□□□□ -0.12
VARS-225ENST00000482996 PTGER3P43115 390 aa14.33□□□□□ -0.12
VARS-225ENST00000482996 NSFP46459 744 aaKnown RBP14.33□□□□□ -0.12
VARS-225ENST00000482996 CXCR3P49682 368 aa14.33□□□□□ -0.12
VARS-225ENST00000482996 ATXN1P54253 815 aaKnown RBP14.33□□□□□ -0.12
VARS-225ENST00000482996 TPM4P67936 248 aa14.33□□□□□ -0.12
VARS-225ENST00000482996 FOXK2Q01167 660 aa14.33□□□□□ -0.12
VARS-225ENST00000482996 PTPRNQ16849 979 aa14.33□□□□□ -0.12
VARS-225ENST00000482996 FSCBQ5H9T9 825 aa14.33□□□□□ -0.12
VARS-225ENST00000482996 PITRM1Q5JRX3 1037 aa14.33□□□□□ -0.12
VARS-225ENST00000482996 ACBD5Q5T8D3 534 aaPredicted RBP14.33□□□□□ -0.12
VARS-225ENST00000482996 RNF219Q5W0B1 726 aaPredicted RBP14.33□□□□□ -0.12
VARS-225ENST00000482996 FBXL22Q6P050 247 aa14.33□□□□□ -0.12
VARS-225ENST00000482996 ARCQ7LC44 396 aa14.33□□□□□ -0.12
VARS-225ENST00000482996 SYT12Q8IV01 421 aa14.33□□□□□ -0.12
VARS-225ENST00000482996 CCAR2Q8N163 923 aaKnown RBP14.33□□□□□ -0.12
VARS-225ENST00000482996 KDM1BQ8NB78 822 aa14.33□□□□□ -0.12
VARS-225ENST00000482996 NT5C3BQ969T7 300 aa14.33□□□□□ -0.12
VARS-225ENST00000482996 PGAP3Q96FM1 320 aaPredicted RBP14.33□□□□□ -0.12
VARS-225ENST00000482996 PPP1R9BQ96SB3 815 aa14.33□□□□□ -0.12
VARS-225ENST00000482996 TBCBQ99426 244 aa14.33□□□□□ -0.12
VARS-225ENST00000482996 TKTL2Q9H0I9 626 aa14.33□□□□□ -0.12
VARS-225ENST00000482996 SIK2Q9H0K1 926 aa14.33□□□□□ -0.12
VARS-225ENST00000482996 RTN4Q9NQC3 1192 aaKnown RBP14.33□□□□□ -0.12
VARS-225ENST00000482996 ITM2CQ9NQX7 267 aa14.33□□□□□ -0.12
VARS-225ENST00000482996 SEPT11Q9NVA2 429 aaKnown RBP14.33□□□□□ -0.12
VARS-225ENST00000482996 USP36Q9P275 1121 aaKnown RBP14.33□□□□□ -0.12
VARS-225ENST00000482996 INTS6Q9UL03 887 aaKnown RBP14.33□□□□□ -0.12
VARS-225ENST00000482996 VANGL2Q9ULK5 521 aa14.33□□□□□ -0.12
VARS-225ENST00000482996 HS3ST4Q9Y661 456 aa14.33□□□□□ -0.12
VARS-225ENST00000482996 CKAP5Q14008 2032 aa14.32□□□□□ -0.12
VARS-225ENST00000482996 CNOT1A5YKK6 2376 aaKnown RBP14.32□□□□□ -0.12
VARS-225ENST00000482996 DCHS1Q96JQ0 3298 aa14.32□□□□□ -0.12
VARS-225ENST00000482996 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.32□□□□□ -0.12
VARS-225ENST00000482996 SYCE3A1L190 88 aa14.32□□□□□ -0.12
VARS-225ENST00000482996 TEX33O43247 280 aa14.32□□□□□ -0.12
VARS-225ENST00000482996 ADCY5O95622 1261 aa14.32□□□□□ -0.12
VARS-225ENST00000482996 SRPRAP08240 638 aaKnown RBP14.32□□□□□ -0.12
VARS-225ENST00000482996 FERP16591 822 aa14.32□□□□□ -0.12
VARS-225ENST00000482996 FLT3P36888 993 aa14.32□□□□□ -0.12
VARS-225ENST00000482996 COPAP53621 1224 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms