RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 ALFQ53S48 1182 aa13.65□□□□□ -0.22
HDAC1-208ENST00000482310 FYB2Q5VWT5 728 aa13.65□□□□□ -0.22
HDAC1-208ENST00000482310 TPRG1Q6ZUI0 275 aa13.65□□□□□ -0.22
HDAC1-208ENST00000482310 RHOT1Q8IXI2 618 aa13.65□□□□□ -0.22
HDAC1-208ENST00000482310 FAM217AQ8IXS0 508 aa13.65□□□□□ -0.22
HDAC1-208ENST00000482310 SYCE1Q8N0S2 351 aa13.65□□□□□ -0.22
HDAC1-208ENST00000482310 RNF10Q8N5U6 811 aaKnown RBP13.65□□□□□ -0.22
HDAC1-208ENST00000482310 KCTD6Q8NC69 237 aa13.65□□□□□ -0.22
HDAC1-208ENST00000482310 WFDC5Q8TCV5 224 aa13.65□□□□□ -0.22
HDAC1-208ENST00000482310 TBC1D31Q96DN5 1066 aa13.65□□□□□ -0.22
HDAC1-208ENST00000482310 EPAS1Q99814 870 aa13.65□□□□□ -0.22
HDAC1-208ENST00000482310 NCAPGQ9BPX3 1015 aa13.65□□□□□ -0.22
HDAC1-208ENST00000482310 CALN1Q9BXU9 219 aa13.65□□□□□ -0.22
HDAC1-208ENST00000482310 DNAJC17Q9NVM6 304 aaKnown RBP13.65□□□□□ -0.22
HDAC1-208ENST00000482310 STOML2Q9UJZ1 356 aa13.65□□□□□ -0.22
HDAC1-208ENST00000482310 CLEC4EQ9ULY5 219 aa13.65□□□□□ -0.22
HDAC1-208ENST00000482310 SPECC1L-ADORA2AF8WAN1 911 aa13.64□□□□□ -0.23
HDAC1-208ENST00000482310 H0Y626 953 aa13.64□□□□□ -0.23
HDAC1-208ENST00000482310 DAPK3O43293 454 aa13.64□□□□□ -0.23
HDAC1-208ENST00000482310 KRT7P08729 469 aa13.64□□□□□ -0.23
HDAC1-208ENST00000482310 CD72P21854 359 aa13.64□□□□□ -0.23
HDAC1-208ENST00000482310 EPHB2P29323 1055 aa13.64□□□□□ -0.23
HDAC1-208ENST00000482310 L1CAMP32004 1257 aa13.64□□□□□ -0.23
HDAC1-208ENST00000482310 AIF1P55008 147 aa13.64□□□□□ -0.23
HDAC1-208ENST00000482310 MLLT6P55198 1093 aaPredicted RBP13.64□□□□□ -0.23
HDAC1-208ENST00000482310 PFKPQ01813 784 aa13.64□□□□□ -0.23
HDAC1-208ENST00000482310 CDH18Q13634 790 aa13.64□□□□□ -0.23
HDAC1-208ENST00000482310 BOLA3Q53S33 107 aa13.64□□□□□ -0.23
HDAC1-208ENST00000482310 ZNF569Q5MCW4 686 aa13.64□□□□□ -0.23
HDAC1-208ENST00000482310 NT5DC3Q86UY8 548 aa13.64□□□□□ -0.23
HDAC1-208ENST00000482310 CCDC50Q8IVM0 306 aa13.64□□□□□ -0.23
HDAC1-208ENST00000482310 MFN1Q8IWA4 741 aa13.64□□□□□ -0.23
HDAC1-208ENST00000482310 ZNF683Q8IZ20 524 aa13.64□□□□□ -0.23
HDAC1-208ENST00000482310 NETO2Q8NC67 525 aa13.64□□□□□ -0.23
HDAC1-208ENST00000482310 RAPGEF5Q92565 580 aa13.64□□□□□ -0.23
HDAC1-208ENST00000482310 RNF25Q96BH1 459 aaPredicted RBP13.64□□□□□ -0.23
HDAC1-208ENST00000482310 CHFRQ96EP1 664 aa13.64□□□□□ -0.23
HDAC1-208ENST00000482310 OSBPL2Q9H1P3 480 aa13.64□□□□□ -0.23
HDAC1-208ENST00000482310 PCDH18Q9HCL0 1135 aa13.64□□□□□ -0.23
HDAC1-208ENST00000482310 MFHAS1Q9Y4C4 1052 aa13.64□□□□□ -0.23
HDAC1-208ENST00000482310 H3BRJ5 948 aa13.63□□□□□ -0.23
HDAC1-208ENST00000482310 PSTPIP1O43586 416 aa13.63□□□□□ -0.23
HDAC1-208ENST00000482310 LUC7L3O95232 432 aaKnown RBP13.63□□□□□ -0.23
HDAC1-208ENST00000482310 CTHP32929 405 aa13.63□□□□□ -0.23
HDAC1-208ENST00000482310 ARL4AP40617 200 aa13.63□□□□□ -0.23
HDAC1-208ENST00000482310 MTA1Q13330 715 aa13.63□□□□□ -0.23
HDAC1-208ENST00000482310 PON2Q15165 354 aa13.63□□□□□ -0.23
HDAC1-208ENST00000482310 MLF2Q15773 248 aaPredicted RBP13.63□□□□□ -0.23
HDAC1-208ENST00000482310 DPYSL2Q16555 572 aa13.63□□□□□ -0.23
HDAC1-208ENST00000482310 GAB4Q2WGN9 574 aa13.63□□□□□ -0.23
HDAC1-208ENST00000482310 SLC44A4Q53GD3 710 aa13.63□□□□□ -0.23
HDAC1-208ENST00000482310 TXNDC11Q6PKC3 985 aa13.63□□□□□ -0.23
HDAC1-208ENST00000482310 ZNF662Q6ZS27 426 aa13.63□□□□□ -0.23
HDAC1-208ENST00000482310 CCDC117Q8IWD4 279 aaPredicted RBP13.63□□□□□ -0.23
HDAC1-208ENST00000482310 SFTPA1Q8IWL2 248 aa13.63□□□□□ -0.23
HDAC1-208ENST00000482310 SIX5Q8N196 739 aa13.63□□□□□ -0.23
HDAC1-208ENST00000482310 SLC35F6Q8N357 371 aa13.63□□□□□ -0.23
HDAC1-208ENST00000482310 TEKT4Q8WW24 435 aa13.63□□□□□ -0.23
HDAC1-208ENST00000482310 DNASE1L2Q92874 299 aa13.63□□□□□ -0.23
HDAC1-208ENST00000482310 CALR3Q96L12 384 aaKnown RBP13.63□□□□□ -0.23
HDAC1-208ENST00000482310 XPO6Q96QU8 1125 aaKnown RBP13.63□□□□□ -0.23
HDAC1-208ENST00000482310 PSMB7Q99436 277 aa13.63□□□□□ -0.23
HDAC1-208ENST00000482310 ZYG11BQ9C0D3 744 aa13.63□□□□□ -0.23
HDAC1-208ENST00000482310 ARHGEF3Q9NR81 526 aa13.63□□□□□ -0.23
HDAC1-208ENST00000482310 SLC2A4RGQ9NR83 387 aa13.63□□□□□ -0.23
HDAC1-208ENST00000482310 TMEM51Q9NW97 253 aa13.63□□□□□ -0.23
HDAC1-208ENST00000482310 CWC15Q9P013 229 aaKnown RBP13.63□□□□□ -0.23
HDAC1-208ENST00000482310 DNAI1Q9UI46 699 aa13.63□□□□□ -0.23
HDAC1-208ENST00000482310 NDRG2Q9UN36 371 aaKnown RBP13.63□□□□□ -0.23
HDAC1-208ENST00000482310 ARIH1Q9Y4X5 557 aaPredicted RBP13.63□□□□□ -0.23
HDAC1-208ENST00000482310 MUC6Q6W4X9 2439 aa13.62□□□□□ -0.23
HDAC1-208ENST00000482310 GFRA2O00451 464 aa13.62□□□□□ -0.23
HDAC1-208ENST00000482310 STK25O00506 426 aa13.62□□□□□ -0.23
HDAC1-208ENST00000482310 ENC1O14682 589 aa13.62□□□□□ -0.23
HDAC1-208ENST00000482310 HOXC11O43248 304 aaPredicted RBP13.62□□□□□ -0.23
HDAC1-208ENST00000482310 KIF5CO60282 957 aa13.62□□□□□ -0.23
HDAC1-208ENST00000482310 TULP3O75386 442 aa13.62□□□□□ -0.23
HDAC1-208ENST00000482310 AMPD1P23109 780 aa13.62□□□□□ -0.23
HDAC1-208ENST00000482310 CTNNA1P35221 906 aaKnown RBP13.62□□□□□ -0.23
HDAC1-208ENST00000482310 DEKP35659 375 aaKnown RBP13.62□□□□□ -0.23
HDAC1-208ENST00000482310 OPRD1P41143 372 aa13.62□□□□□ -0.23
HDAC1-208ENST00000482310 DGKGP49619 791 aa13.62□□□□□ -0.23
HDAC1-208ENST00000482310 MESP2Q0VG99 397 aa13.62□□□□□ -0.23
HDAC1-208ENST00000482310 SEMA3BQ13214 749 aa13.62□□□□□ -0.23
HDAC1-208ENST00000482310 ZNF211Q13398 564 aaPredicted RBP13.62□□□□□ -0.23
HDAC1-208ENST00000482310 DPYSL3Q14195 570 aa13.62□□□□□ -0.23
HDAC1-208ENST00000482310 FSCBQ5H9T9 825 aa13.62□□□□□ -0.23
HDAC1-208ENST00000482310 MANEALQ5VSG8 457 aa13.62□□□□□ -0.23
HDAC1-208ENST00000482310 TTC39BQ5VTQ0 682 aaPredicted RBP13.62□□□□□ -0.23
HDAC1-208ENST00000482310 KAZNQ674X7 775 aa13.62□□□□□ -0.23
HDAC1-208ENST00000482310 ASTLQ6HA08 431 aaPredicted RBP13.62□□□□□ -0.23
HDAC1-208ENST00000482310 GRAMD4Q6IC98 578 aa13.62□□□□□ -0.23
HDAC1-208ENST00000482310 AADACL2Q6P093 401 aa13.62□□□□□ -0.23
HDAC1-208ENST00000482310 RFX8Q6ZV50 586 aa13.62□□□□□ -0.23
HDAC1-208ENST00000482310 ZNF354CQ86Y25 554 aa13.62□□□□□ -0.23
HDAC1-208ENST00000482310 KIAA1958Q8N8K9 716 aa13.62□□□□□ -0.23
HDAC1-208ENST00000482310 TRIM58Q8NG06 486 aa13.62□□□□□ -0.23
HDAC1-208ENST00000482310 CD101Q93033 1021 aa13.62□□□□□ -0.23
HDAC1-208ENST00000482310 C1orf74Q96LT6 269 aa13.62□□□□□ -0.23
HDAC1-208ENST00000482310 ABCB8Q9NUT2 735 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms