RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 TAF5Q15542 800 aa13.92□□□□□ -0.18
CTDSP1-208ENST00000482272 DCAF6Q58WW2 860 aa13.92□□□□□ -0.18
CTDSP1-208ENST00000482272 ZC3H12AQ5D1E8 599 aaKnown RBP13.92□□□□□ -0.18
CTDSP1-208ENST00000482272 ZNF776Q68DI1 518 aaPredicted RBP13.92□□□□□ -0.18
CTDSP1-208ENST00000482272 FAM114A1Q8IWE2 563 aa13.92□□□□□ -0.18
CTDSP1-208ENST00000482272 LGI2Q8N0V4 545 aa13.92□□□□□ -0.18
CTDSP1-208ENST00000482272 CFAP52Q8N1V2 620 aa13.92□□□□□ -0.18
CTDSP1-208ENST00000482272 WDTC1Q8N5D0 677 aa13.92□□□□□ -0.18
CTDSP1-208ENST00000482272 KDM1BQ8NB78 822 aa13.92□□□□□ -0.18
CTDSP1-208ENST00000482272 PPP1R13BQ96KQ4 1090 aa13.92□□□□□ -0.18
CTDSP1-208ENST00000482272 LMLNQ96KR4 655 aa13.92□□□□□ -0.18
CTDSP1-208ENST00000482272 ERVW-1Q9UQF0 538 aa13.92□□□□□ -0.18
CTDSP1-208ENST00000482272 CACNA1BQ00975 2339 aa13.91□□□□□ -0.18
CTDSP1-208ENST00000482272 SPAARA0A1B0GVQ0 90 aa13.91□□□□□ -0.18
CTDSP1-208ENST00000482272 KCNU1A8MYU2 1149 aa13.91□□□□□ -0.18
CTDSP1-208ENST00000482272 F5H5T6 163 aa13.91□□□□□ -0.18
CTDSP1-208ENST00000482272 GJB3O75712 270 aa13.91□□□□□ -0.18
CTDSP1-208ENST00000482272 TRIM16O95361 564 aa13.91□□□□□ -0.18
CTDSP1-208ENST00000482272 CER1O95813 267 aa13.91□□□□□ -0.18
CTDSP1-208ENST00000482272 PROS1P07225 676 aa13.91□□□□□ -0.18
CTDSP1-208ENST00000482272 SRPRAP08240 638 aaKnown RBP13.91□□□□□ -0.18
CTDSP1-208ENST00000482272 PRKCSHP14314 528 aaPredicted RBP13.91□□□□□ -0.18
CTDSP1-208ENST00000482272 ABCB4P21439 1286 aa13.91□□□□□ -0.18
CTDSP1-208ENST00000482272 ACSL1P33121 698 aa13.91□□□□□ -0.18
CTDSP1-208ENST00000482272 KRT9P35527 623 aa13.91□□□□□ -0.18
CTDSP1-208ENST00000482272 NNMTP40261 264 aa13.91□□□□□ -0.18
CTDSP1-208ENST00000482272 CDK17Q00537 523 aa13.91□□□□□ -0.18
CTDSP1-208ENST00000482272 DPCR1Q3MIW9 517 aa13.91□□□□□ -0.18
CTDSP1-208ENST00000482272 PITRM1Q5JRX3 1037 aa13.91□□□□□ -0.18
CTDSP1-208ENST00000482272 RAP1GAP2Q684P5 730 aa13.91□□□□□ -0.18
CTDSP1-208ENST00000482272 CHSY1Q86X52 802 aa13.91□□□□□ -0.18
CTDSP1-208ENST00000482272 DEFB106AQ8N104 65 aa13.91□□□□□ -0.18
CTDSP1-208ENST00000482272 GANCQ8TET4 914 aa13.91□□□□□ -0.18
CTDSP1-208ENST00000482272 SHC3Q92529 594 aa13.91□□□□□ -0.18
CTDSP1-208ENST00000482272 SNX19Q92543 992 aa13.91□□□□□ -0.18
CTDSP1-208ENST00000482272 RNF34Q969K3 372 aa13.91□□□□□ -0.18
CTDSP1-208ENST00000482272 PPP1R9BQ96SB3 815 aa13.91□□□□□ -0.18
CTDSP1-208ENST00000482272 SCNM1Q9BWG6 230 aa13.91□□□□□ -0.18
CTDSP1-208ENST00000482272 CLSTN2Q9H4D0 955 aa13.91□□□□□ -0.18
CTDSP1-208ENST00000482272 C6orf106Q9H6K1 298 aaPredicted RBP13.91□□□□□ -0.18
CTDSP1-208ENST00000482272 SGK2Q9HBY8 427 aa13.91□□□□□ -0.18
CTDSP1-208ENST00000482272 ASNSD1Q9NWL6 643 aa13.91□□□□□ -0.18
CTDSP1-208ENST00000482272 DNAJC12Q9UKB3 198 aa13.91□□□□□ -0.18
CTDSP1-208ENST00000482272 INTS6Q9UL03 887 aaKnown RBP13.91□□□□□ -0.18
CTDSP1-208ENST00000482272 PCDHGC3Q9UN70 934 aa13.91□□□□□ -0.18
CTDSP1-208ENST00000482272 WASF3Q9UPY6 502 aa13.91□□□□□ -0.18
CTDSP1-208ENST00000482272 CEP83Q9Y592 693 aa13.91□□□□□ -0.18
CTDSP1-208ENST00000482272 WDFY3Q8IZQ1 3526 aa13.91□□□□□ -0.18
CTDSP1-208ENST00000482272 ZFHX4Q86UP3 3567 aa13.91□□□□□ -0.18
CTDSP1-208ENST00000482272 ASPMQ8IZT6 3477 aa13.9□□□□□ -0.18
CTDSP1-208ENST00000482272 TARSL2A2RTX5 802 aaKnown RBP13.9□□□□□ -0.18
CTDSP1-208ENST00000482272 SH3BP5O60239 455 aa13.9□□□□□ -0.18
CTDSP1-208ENST00000482272 SEMA4FO95754 770 aa13.9□□□□□ -0.18
CTDSP1-208ENST00000482272 IGLV3-25P01717 112 aa13.9□□□□□ -0.18
CTDSP1-208ENST00000482272 SPINK2P20155 84 aa13.9□□□□□ -0.18
CTDSP1-208ENST00000482272 CCR1P32246 355 aa13.9□□□□□ -0.18
CTDSP1-208ENST00000482272 MATKP42679 507 aa13.9□□□□□ -0.18
CTDSP1-208ENST00000482272 ECT2LQ008S8 904 aa13.9□□□□□ -0.18
CTDSP1-208ENST00000482272 MTA1Q13330 715 aa13.9□□□□□ -0.18
CTDSP1-208ENST00000482272 SLC12A1Q13621 1099 aa13.9□□□□□ -0.18
CTDSP1-208ENST00000482272 TEAD4Q15561 434 aa13.9□□□□□ -0.18
CTDSP1-208ENST00000482272 TRIP6Q15654 476 aaKnown RBP13.9□□□□□ -0.18
CTDSP1-208ENST00000482272 MAN2A1Q16706 1144 aa13.9□□□□□ -0.18
CTDSP1-208ENST00000482272 HNRNPA1L2Q32P51 320 aaKnown RBP13.9□□□□□ -0.18
CTDSP1-208ENST00000482272 HSP90AA4PQ58FG1 418 aa13.9□□□□□ -0.18
CTDSP1-208ENST00000482272 FSCBQ5H9T9 825 aa13.9□□□□□ -0.18
CTDSP1-208ENST00000482272 MIIPQ5JXC2 388 aa13.9□□□□□ -0.18
CTDSP1-208ENST00000482272 RNF219Q5W0B1 726 aaPredicted RBP13.9□□□□□ -0.18
CTDSP1-208ENST00000482272 OR6B2Q6IFH4 312 aa13.9□□□□□ -0.18
CTDSP1-208ENST00000482272 UNQ6494/PRO21346Q6UXR6 183 aa13.9□□□□□ -0.18
CTDSP1-208ENST00000482272 USP30Q70CQ3 517 aa13.9□□□□□ -0.18
CTDSP1-208ENST00000482272 MYO19Q96H55 970 aa13.9□□□□□ -0.18
CTDSP1-208ENST00000482272 ADAM33Q9BZ11 813 aa13.9□□□□□ -0.18
CTDSP1-208ENST00000482272 RSPH9Q9H1X1 276 aaPredicted RBP13.9□□□□□ -0.18
CTDSP1-208ENST00000482272 MTG2Q9H4K7 406 aa13.9□□□□□ -0.18
CTDSP1-208ENST00000482272 GAREM1Q9H706 876 aa13.9□□□□□ -0.18
CTDSP1-208ENST00000482272 FAM204AQ9H8W3 233 aa13.9□□□□□ -0.18
CTDSP1-208ENST00000482272 OSGEPQ9NPF4 335 aa13.9□□□□□ -0.18
CTDSP1-208ENST00000482272 DACH1Q9UI36 760 aa13.9□□□□□ -0.18
CTDSP1-208ENST00000482272 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.9□□□□□ -0.18
CTDSP1-208ENST00000482272 SLCO1B1Q9Y6L6 691 aa13.9□□□□□ -0.18
CTDSP1-208ENST00000482272 SPEGQ15772 3267 aa13.89□□□□□ -0.19
CTDSP1-208ENST00000482272 GON4LQ3T8J9 2241 aa13.89□□□□□ -0.19
CTDSP1-208ENST00000482272 FAM170AA1A519 330 aa13.89□□□□□ -0.19
CTDSP1-208ENST00000482272 C1QTNF9BB2RNN3 333 aa13.89□□□□□ -0.19
CTDSP1-208ENST00000482272 HSF2BPO75031 334 aa13.89□□□□□ -0.19
CTDSP1-208ENST00000482272 SIN3BO75182 1162 aa13.89□□□□□ -0.19
CTDSP1-208ENST00000482272 FSBPO95073 299 aa13.89□□□□□ -0.19
CTDSP1-208ENST00000482272 TOP3BO95985 862 aaKnown RBP13.89□□□□□ -0.19
CTDSP1-208ENST00000482272 C1QTNF9P0C862 333 aa13.89□□□□□ -0.19
CTDSP1-208ENST00000482272 ZNF883P0CG24 379 aa13.89□□□□□ -0.19
CTDSP1-208ENST00000482272 CSNK1EP49674 416 aaKnown RBP13.89□□□□□ -0.19
CTDSP1-208ENST00000482272 AFF3P51826 1226 aaKnown RBP13.89□□□□□ -0.19
CTDSP1-208ENST00000482272 OXCT1P55809 520 aa13.89□□□□□ -0.19
CTDSP1-208ENST00000482272 BPIFB4P59827 614 aa13.89□□□□□ -0.19
CTDSP1-208ENST00000482272 SULT2A1Q06520 285 aa13.89□□□□□ -0.19
CTDSP1-208ENST00000482272 EIF4EBP2Q13542 120 aaPredicted RBP13.89□□□□□ -0.19
CTDSP1-208ENST00000482272 ARID5BQ14865 1188 aa13.89□□□□□ -0.19
CTDSP1-208ENST00000482272 SUZ12Q15022 739 aaKnown RBP13.89□□□□□ -0.19
CTDSP1-208ENST00000482272 ZNF423Q2M1K9 1284 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms