RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 SSUH2Q9Y2M2 353 aa15.55■□□□□ 0.08
HDAC6-224ENST00000481929 HBS1LQ9Y450 684 aaKnown RBP15.55■□□□□ 0.08
HDAC6-224ENST00000481929 UNC79Q9P2D8 2635 aa15.54■□□□□ 0.08
HDAC6-224ENST00000481929 TBC1D3DA0A087WVF3 549 aa15.54■□□□□ 0.08
HDAC6-224ENST00000481929 TBC1D3IA0A087WXS9 549 aa15.54■□□□□ 0.08
HDAC6-224ENST00000481929 TBC1D3EA0A087X179 549 aa15.54■□□□□ 0.08
HDAC6-224ENST00000481929 TBC1D3KA0A087X1G2 549 aa15.54■□□□□ 0.08
HDAC6-224ENST00000481929 TBC1D3FA6NER0 549 aaPredicted RBP15.54■□□□□ 0.08
HDAC6-224ENST00000481929 TBC1D3LB9A6J9 549 aa15.54■□□□□ 0.08
HDAC6-224ENST00000481929 LATO43561 262 aa15.54■□□□□ 0.08
HDAC6-224ENST00000481929 LATS1O95835 1130 aa15.54■□□□□ 0.08
HDAC6-224ENST00000481929 ASLP04424 464 aa15.54■□□□□ 0.08
HDAC6-224ENST00000481929 TBC1D3HP0C7X1 549 aa15.54■□□□□ 0.08
HDAC6-224ENST00000481929 GOT1P17174 413 aa15.54■□□□□ 0.08
HDAC6-224ENST00000481929 PIK3CAP42336 1068 aa15.54■□□□□ 0.08
HDAC6-224ENST00000481929 PSMD8P48556 350 aa15.54■□□□□ 0.08
HDAC6-224ENST00000481929 PPP2CBP62714 309 aa15.54■□□□□ 0.08
HDAC6-224ENST00000481929 PPP2CAP67775 309 aa15.54■□□□□ 0.08
HDAC6-224ENST00000481929 OVGP1Q12889 678 aa15.54■□□□□ 0.08
HDAC6-224ENST00000481929 ZACNQ401N2 412 aa15.54■□□□□ 0.08
HDAC6-224ENST00000481929 C6orf132Q5T0Z8 1188 aa15.54■□□□□ 0.08
HDAC6-224ENST00000481929 PPP1R26Q5T8A7 1209 aaPredicted RBP15.54■□□□□ 0.08
HDAC6-224ENST00000481929 TBC1D3GQ6DHY5 549 aa15.54■□□□□ 0.08
HDAC6-224ENST00000481929 TBC1D3CQ6IPX1 549 aa15.54■□□□□ 0.08
HDAC6-224ENST00000481929 CCDC81Q6ZN84 652 aa15.54■□□□□ 0.08
HDAC6-224ENST00000481929 TMC6Q7Z403 805 aa15.54■□□□□ 0.08
HDAC6-224ENST00000481929 TBC1D3Q8IZP1 549 aaPredicted RBP15.54■□□□□ 0.08
HDAC6-224ENST00000481929 OR4C6Q8NH72 309 aa15.54■□□□□ 0.08
HDAC6-224ENST00000481929 CCDC97Q96F63 343 aaPredicted RBP15.54■□□□□ 0.08
HDAC6-224ENST00000481929 MYO19Q96H55 970 aa15.54■□□□□ 0.08
HDAC6-224ENST00000481929 COL12A1Q99715 3063 aa15.54■□□□□ 0.08
HDAC6-224ENST00000481929 AHCTF1Q8WYP5 2266 aa15.54■□□□□ 0.08
HDAC6-224ENST00000481929 A0A1B0GVM2 712 aa15.53■□□□□ 0.08
HDAC6-224ENST00000481929 TBL1XO60907 577 aa15.53■□□□□ 0.08
HDAC6-224ENST00000481929 ADH1BP00325 375 aa15.53■□□□□ 0.08
HDAC6-224ENST00000481929 RBMS1P29558 406 aaKnown RBP15.53■□□□□ 0.08
HDAC6-224ENST00000481929 SGSHP51688 502 aa15.53■□□□□ 0.08
HDAC6-224ENST00000481929 AMPD3Q01432 767 aa15.53■□□□□ 0.08
HDAC6-224ENST00000481929 MPP7Q5T2T1 576 aa15.53■□□□□ 0.08
HDAC6-224ENST00000481929 C9orf64Q5T6V5 341 aa15.53■□□□□ 0.08
HDAC6-224ENST00000481929 IGF2-ASQ6U949 168 aa15.53■□□□□ 0.08
HDAC6-224ENST00000481929 PRPF39Q86UA1 669 aaKnown RBP15.53■□□□□ 0.08
HDAC6-224ENST00000481929 AADATQ8N5Z0 425 aa15.53■□□□□ 0.08
HDAC6-224ENST00000481929 TTC17Q96AE7 1141 aa15.53■□□□□ 0.08
HDAC6-224ENST00000481929 IMPG2Q9BZV3 1241 aa15.53■□□□□ 0.08
HDAC6-224ENST00000481929 CYP3A43Q9HB55 503 aa15.53■□□□□ 0.08
HDAC6-224ENST00000481929 EDDM13A0A1B0GTR0 161 aa15.52■□□□□ 0.08
HDAC6-224ENST00000481929 TARSL2A2RTX5 802 aaKnown RBP15.52■□□□□ 0.08
HDAC6-224ENST00000481929 TERTO14746 1132 aaKnown RBP15.52■□□□□ 0.08
HDAC6-224ENST00000481929 HLA-DRAP01903 254 aa15.52■□□□□ 0.08
HDAC6-224ENST00000481929 CKMT1AP12532 417 aa15.52■□□□□ 0.08
HDAC6-224ENST00000481929 CD58P19256 250 aa15.52■□□□□ 0.08
HDAC6-224ENST00000481929 C5AR1P21730 350 aa15.52■□□□□ 0.08
HDAC6-224ENST00000481929 NUDT1P36639 197 aa15.52■□□□□ 0.08
HDAC6-224ENST00000481929 CSKP41240 450 aa15.52■□□□□ 0.08
HDAC6-224ENST00000481929 DLG4P78352 724 aa15.52■□□□□ 0.08
HDAC6-224ENST00000481929 CEBPZQ03701 1054 aaKnown RBP15.52■□□□□ 0.08
HDAC6-224ENST00000481929 STAT4Q14765 748 aa15.52■□□□□ 0.08
HDAC6-224ENST00000481929 ARID5BQ14865 1188 aa15.52■□□□□ 0.08
HDAC6-224ENST00000481929 KMT5BQ4FZB7 885 aa15.52■□□□□ 0.08
HDAC6-224ENST00000481929 SGO2Q562F6 1265 aa15.52■□□□□ 0.08
HDAC6-224ENST00000481929 C3orf38Q5JPI3 329 aa15.52■□□□□ 0.08
HDAC6-224ENST00000481929 SV2AQ7L0J3 742 aa15.52■□□□□ 0.08
HDAC6-224ENST00000481929 PIGZQ86VD9 579 aa15.52■□□□□ 0.08
HDAC6-224ENST00000481929 MFN1Q8IWA4 741 aa15.52■□□□□ 0.08
HDAC6-224ENST00000481929 SLC25A45Q8N413 288 aa15.52■□□□□ 0.08
HDAC6-224ENST00000481929 KDM1BQ8NB78 822 aa15.52■□□□□ 0.08
HDAC6-224ENST00000481929 GOLGA5Q8TBA6 731 aa15.52■□□□□ 0.08
HDAC6-224ENST00000481929 RNF139Q8WU17 664 aa15.52■□□□□ 0.08
HDAC6-224ENST00000481929 ABCG4Q9H172 646 aa15.52■□□□□ 0.08
HDAC6-224ENST00000481929 KBTBD4Q9NVX7 518 aa15.52■□□□□ 0.08
HDAC6-224ENST00000481929 DMTF1Q9Y222 760 aa15.52■□□□□ 0.08
HDAC6-224ENST00000481929 TLN1Q9Y490 2541 aaKnown RBP15.51■□□□□ 0.07
HDAC6-224ENST00000481929 TEX15Q9BXT5 2789 aa15.51■□□□□ 0.07
HDAC6-224ENST00000481929 VPS37CA5D8V6 355 aaPredicted RBP15.51■□□□□ 0.07
HDAC6-224ENST00000481929 FFAR2O15552 330 aa15.51■□□□□ 0.07
HDAC6-224ENST00000481929 ZBED1O96006 694 aa15.51■□□□□ 0.07
HDAC6-224ENST00000481929 GP1BAP07359 652 aa15.51■□□□□ 0.07
HDAC6-224ENST00000481929 ALPPL2P10696 532 aa15.51■□□□□ 0.07
HDAC6-224ENST00000481929 DGKAP23743 735 aa15.51■□□□□ 0.07
HDAC6-224ENST00000481929 MAT2AP31153 395 aaKnown RBP15.51■□□□□ 0.07
HDAC6-224ENST00000481929 TKTL1P51854 596 aa15.51■□□□□ 0.07
HDAC6-224ENST00000481929 KNOP1Q1ED39 458 aaKnown RBP15.51■□□□□ 0.07
HDAC6-224ENST00000481929 RAB41Q5JT25 222 aa15.51■□□□□ 0.07
HDAC6-224ENST00000481929 PIK3R6Q5UE93 754 aa15.51■□□□□ 0.07
HDAC6-224ENST00000481929 RFWD3Q6PCD5 774 aa15.51■□□□□ 0.07
HDAC6-224ENST00000481929 ZNF574Q6ZN55 896 aaPredicted RBP15.51■□□□□ 0.07
HDAC6-224ENST00000481929 ATG14Q6ZNE5 492 aa15.51■□□□□ 0.07
HDAC6-224ENST00000481929 MRGPRX3Q96LB0 322 aa15.51■□□□□ 0.07
HDAC6-224ENST00000481929 FAM129BQ96TA1 746 aa15.51■□□□□ 0.07
HDAC6-224ENST00000481929 IRX2Q9BZI1 471 aaPredicted RBP15.51■□□□□ 0.07
HDAC6-224ENST00000481929 UBXN6Q9BZV1 441 aa15.51■□□□□ 0.07
HDAC6-224ENST00000481929 CUEDC2Q9H467 287 aa15.51■□□□□ 0.07
HDAC6-224ENST00000481929 EVA1BQ9NVM1 165 aa15.51■□□□□ 0.07
HDAC6-224ENST00000481929 ARHGAP20Q9P2F6 1191 aa15.51■□□□□ 0.07
HDAC6-224ENST00000481929 SFMBT1Q9UHJ3 866 aa15.51■□□□□ 0.07
HDAC6-224ENST00000481929 CYTH4Q9UIA0 394 aa15.51■□□□□ 0.07
HDAC6-224ENST00000481929 SATB2Q9UPW6 733 aa15.51■□□□□ 0.07
HDAC6-224ENST00000481929 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.51■□□□□ 0.07
HDAC6-224ENST00000481929 USP9XQ93008 2570 aaPredicted RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms