RNA–Protein interactions for RNA: ENST00000481812.4

VPS16-207, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 943 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-207ENST00000481812 RNF135Q8IUD6 432 aa21.37■■□□□ 1.01
VPS16-207ENST00000481812 RCOR2Q8IZ40 523 aa21.37■■□□□ 1.01
VPS16-207ENST00000481812 GJD3Q8N144 294 aa21.37■■□□□ 1.01
VPS16-207ENST00000481812 DDI1Q8WTU0 396 aa21.37■■□□□ 1.01
VPS16-207ENST00000481812 KRT35Q92764 455 aa21.37■■□□□ 1.01
VPS16-207ENST00000481812 IGSF8Q969P0 613 aa21.37■■□□□ 1.01
VPS16-207ENST00000481812 MYEOVQ96EZ4 313 aa21.37■■□□□ 1.01
VPS16-207ENST00000481812 RBM41Q96IZ5 413 aaKnown RBP21.37■■□□□ 1.01
VPS16-207ENST00000481812 ZNF670Q9BS34 389 aa21.37■■□□□ 1.01
VPS16-207ENST00000481812 BBS2Q9BXC9 721 aa21.37■■□□□ 1.01
VPS16-207ENST00000481812 SLC2A11Q9BYW1 496 aa21.37■■□□□ 1.01
VPS16-207ENST00000481812 PRDM16Q9HAZ2 1276 aa21.37■■□□□ 1.01
VPS16-207ENST00000481812 CWC15Q9P013 229 aaKnown RBP21.37■■□□□ 1.01
VPS16-207ENST00000481812 STIM2Q9P246 746 aa21.37■■□□□ 1.01
VPS16-207ENST00000481812 FBXO10Q9UK96 956 aa21.37■■□□□ 1.01
VPS16-207ENST00000481812 NEU3Q9UQ49 428 aa21.37■■□□□ 1.01
VPS16-207ENST00000481812 WASH4PA8MWX3 477 aa21.36■■□□□ 1.01
VPS16-207ENST00000481812 EEF2KO00418 725 aaKnown RBP21.36■■□□□ 1.01
VPS16-207ENST00000481812 FGF10O15520 208 aaPredicted RBP21.36■■□□□ 1.01
VPS16-207ENST00000481812 CREB3O43889 395 aa21.36■■□□□ 1.01
VPS16-207ENST00000481812 CLDN11O75508 207 aa21.36■■□□□ 1.01
VPS16-207ENST00000481812 TNNT1P13805 278 aa21.36■■□□□ 1.01
VPS16-207ENST00000481812 RHOQP17081 205 aa21.36■■□□□ 1.01
VPS16-207ENST00000481812 HOXD9P28356 352 aaPredicted RBP21.36■■□□□ 1.01
VPS16-207ENST00000481812 DEKP35659 375 aaKnown RBP21.36■■□□□ 1.01
VPS16-207ENST00000481812 VCPP55072 806 aaKnown RBP21.36■■□□□ 1.01
VPS16-207ENST00000481812 TPI1P60174 286 aa21.36■■□□□ 1.01
VPS16-207ENST00000481812 COPS2P61201 443 aa21.36■■□□□ 1.01
VPS16-207ENST00000481812 RPS24P62847 133 aaKnown RBP21.36■■□□□ 1.01
VPS16-207ENST00000481812 AMPD2Q01433 879 aa21.36■■□□□ 1.01
VPS16-207ENST00000481812 DPYSL3Q14195 570 aa21.36■■□□□ 1.01
VPS16-207ENST00000481812 RPS6KA1Q15418 735 aa21.36■■□□□ 1.01
VPS16-207ENST00000481812 TAZQ16635 292 aa21.36■■□□□ 1.01
VPS16-207ENST00000481812 ODF2Q5BJF6 829 aa21.36■■□□□ 1.01
VPS16-207ENST00000481812 PPP6R3Q5H9R7 873 aaPredicted RBP21.36■■□□□ 1.01
VPS16-207ENST00000481812 ZFYVE27Q5T4F4 411 aa21.36■■□□□ 1.01
VPS16-207ENST00000481812 SLC35F6Q8N357 371 aa21.36■■□□□ 1.01
VPS16-207ENST00000481812 RAPGEF5Q92565 580 aa21.36■■□□□ 1.01
VPS16-207ENST00000481812 FAF2Q96CS3 445 aa21.36■■□□□ 1.01
VPS16-207ENST00000481812 MSANTD3Q96H12 275 aa21.36■■□□□ 1.01
VPS16-207ENST00000481812 C8orf33Q9H7E9 229 aaPredicted RBP21.36■■□□□ 1.01
VPS16-207ENST00000481812 CATSPERBQ9H7T0 1116 aa21.36■■□□□ 1.01
VPS16-207ENST00000481812 GTSE1Q9NYZ3 720 aa21.36■■□□□ 1.01
VPS16-207ENST00000481812 LRRD1A4D1F6 860 aa21.35■■□□□ 1.01
VPS16-207ENST00000481812 OTOL1A6NHN0 477 aaPredicted RBP21.35■■□□□ 1.01
VPS16-207ENST00000481812 C3orf70A6NLC5 250 aaPredicted RBP21.35■■□□□ 1.01
VPS16-207ENST00000481812 CACNG3O60359 315 aa21.35■■□□□ 1.01
VPS16-207ENST00000481812 TBL1XO60907 577 aa21.35■■□□□ 1.01
VPS16-207ENST00000481812 KRT1P04264 644 aa21.35■■□□□ 1.01
VPS16-207ENST00000481812 TYRP14679 529 aa21.35■■□□□ 1.01
VPS16-207ENST00000481812 GOT1P17174 413 aa21.35■■□□□ 1.01
VPS16-207ENST00000481812 IL4RP24394 825 aa21.35■■□□□ 1.01
VPS16-207ENST00000481812 EPHB2P29323 1055 aa21.35■■□□□ 1.01
VPS16-207ENST00000481812 EIF2DP41214 584 aaKnown RBP21.35■■□□□ 1.01
VPS16-207ENST00000481812 MARCKSL1P49006 195 aa21.35■■□□□ 1.01
VPS16-207ENST00000481812 SGSHP51688 502 aa21.35■■□□□ 1.01
VPS16-207ENST00000481812 GAB4Q2WGN9 574 aa21.35■■□□□ 1.01
VPS16-207ENST00000481812 ANO4Q32M45 955 aa21.35■■□□□ 1.01
VPS16-207ENST00000481812 RFX8Q6ZV50 586 aa21.35■■□□□ 1.01
VPS16-207ENST00000481812 ZSCAN30Q86W11 494 aa21.35■■□□□ 1.01
VPS16-207ENST00000481812 C17orf53Q8N3J3 647 aaPredicted RBP21.35■■□□□ 1.01
VPS16-207ENST00000481812 CSPG4P5Q96PW8 444 aa21.35■■□□□ 1.01
VPS16-207ENST00000481812 XPO6Q96QU8 1125 aaKnown RBP21.35■■□□□ 1.01
VPS16-207ENST00000481812 TLR10Q9BXR5 811 aa21.35■■□□□ 1.01
VPS16-207ENST00000481812 TMEM248Q9NWD8 314 aa21.35■■□□□ 1.01
VPS16-207ENST00000481812 CHD5Q8TDI0 1954 aa21.35■■□□□ 1.01
VPS16-207ENST00000481812 COL4A3Q01955 1670 aa21.34■■□□□ 1.01
VPS16-207ENST00000481812 NEDD8-MDP1E9PL57 170 aa21.34■■□□□ 1.01
VPS16-207ENST00000481812 GJA4P35212 333 aa21.34■■□□□ 1.01
VPS16-207ENST00000481812 GNG11P61952 73 aa21.34■■□□□ 1.01
VPS16-207ENST00000481812 DPYSQ14117 519 aa21.34■■□□□ 1.01
VPS16-207ENST00000481812 NLRP14Q86W24 1093 aa21.34■■□□□ 1.01
VPS16-207ENST00000481812 ETFBKMTQ8IXQ9 262 aa21.34■■□□□ 1.01
VPS16-207ENST00000481812 UBALD2Q8IYN6 164 aa21.34■■□□□ 1.01
VPS16-207ENST00000481812 CFAP52Q8N1V2 620 aa21.34■■□□□ 1.01
VPS16-207ENST00000481812 FIBINQ8TAL6 211 aa21.34■■□□□ 1.01
VPS16-207ENST00000481812 ALG3Q92685 438 aa21.34■■□□□ 1.01
VPS16-207ENST00000481812 P2RY11Q96G91 374 aa21.34■■□□□ 1.01
VPS16-207ENST00000481812 CALN1Q9BXU9 219 aa21.34■■□□□ 1.01
VPS16-207ENST00000481812 ZNF212Q9UDV6 495 aa21.34■■□□□ 1.01
VPS16-207ENST00000481812 PACSIN2Q9UNF0 486 aaPredicted RBP21.34■■□□□ 1.01
VPS16-207ENST00000481812 EFR3BQ9Y2G0 817 aa21.34■■□□□ 1.01
VPS16-207ENST00000481812 TBC1D30Q9Y2I9 924 aa21.34■■□□□ 1.01
VPS16-207ENST00000481812 KIAA1549LQ6ZVL6 1849 aa21.34■■□□□ 1.01
VPS16-207ENST00000481812 NCOR1O75376 2440 aa21.34■■□□□ 1.01
VPS16-207ENST00000481812 DAPK3O43293 454 aa21.33■■□□□ 1.01
VPS16-207ENST00000481812 NARSO43776 548 aaKnown RBP21.33■■□□□ 1.01
VPS16-207ENST00000481812 CNTN5O94779 1100 aa21.33■■□□□ 1.01
VPS16-207ENST00000481812 LUC7L3O95232 432 aaKnown RBP21.33■■□□□ 1.01
VPS16-207ENST00000481812 TUBB4AP04350 444 aa21.33■■□□□ 1.01
VPS16-207ENST00000481812 CD48P09326 243 aa21.33■■□□□ 1.01
VPS16-207ENST00000481812 PTPN7P35236 360 aa21.33■■□□□ 1.01
VPS16-207ENST00000481812 CETN2P41208 172 aa21.33■■□□□ 1.01
VPS16-207ENST00000481812 CDKN2BP42772 138 aa21.33■■□□□ 1.01
VPS16-207ENST00000481812 MAPKAPK2P49137 400 aa21.33■■□□□ 1.01
VPS16-207ENST00000481812 OXCT1P55809 520 aa21.33■■□□□ 1.01
VPS16-207ENST00000481812 PPP2R5EQ16537 467 aa21.33■■□□□ 1.01
VPS16-207ENST00000481812 ALFQ53S48 1182 aa21.33■■□□□ 1.01
VPS16-207ENST00000481812 RWDD4Q6NW29 188 aaKnown RBP21.33■■□□□ 1.01
VPS16-207ENST00000481812 C1orf228Q6PIY5 440 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms