RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	ZNF474	Q6S9Z5	364 aa	Predicted RBP	3.69	□□□□□ -1.82
CCNL1-223	ENST00000481173	TRAPPC11	Q7Z392	1133 aa		3.69	□□□□□ -1.82
CCNL1-223	ENST00000481173	RASGRP3	Q8IV61	690 aa		3.69	□□□□□ -1.82
CCNL1-223	ENST00000481173	CCAR1	Q8IX12	1150 aa	Known RBP	3.69	□□□□□ -1.82
CCNL1-223	ENST00000481173	SLC22A17	Q8WUG5	538 aa		3.69	□□□□□ -1.82
CCNL1-223	ENST00000481173	PMM1	Q92871	262 aa		3.69	□□□□□ -1.82
CCNL1-223	ENST00000481173	COLEC11	Q9BWP8	271 aa		3.69	□□□□□ -1.82
CCNL1-223	ENST00000481173	STARD7	Q9NQZ5	370 aa		3.69	□□□□□ -1.82
CCNL1-223	ENST00000481173	PLSCR4	Q9NRQ2	329 aa		3.69	□□□□□ -1.82
CCNL1-223	ENST00000481173	FBXO28	Q9NVF7	368 aa		3.69	□□□□□ -1.82
CCNL1-223	ENST00000481173	INSL5	Q9Y5Q6	135 aa		3.69	□□□□□ -1.82
CCNL1-223	ENST00000481173	EVPL	Q92817	2033 aa		3.68	□□□□□ -1.82
CCNL1-223	ENST00000481173	DPPA5	A6NC42	116 aa		3.68	□□□□□ -1.82
CCNL1-223	ENST00000481173		M0QYT0	321 aa		3.68	□□□□□ -1.82
CCNL1-223	ENST00000481173	SPTLC2	O15270	562 aa		3.68	□□□□□ -1.82
CCNL1-223	ENST00000481173	PPM1G	O15355	546 aa	Predicted RBP	3.68	□□□□□ -1.82
CCNL1-223	ENST00000481173	DHH	O43323	396 aa		3.68	□□□□□ -1.82
CCNL1-223	ENST00000481173	PARN	O95453	639 aa	Known RBP	3.68	□□□□□ -1.82
CCNL1-223	ENST00000481173	TNFSF4	P23510	183 aa		3.68	□□□□□ -1.82
CCNL1-223	ENST00000481173	MLH1	P40692	756 aa		3.68	□□□□□ -1.82
CCNL1-223	ENST00000481173	SLC37A1	P57057	533 aa		3.68	□□□□□ -1.82
CCNL1-223	ENST00000481173	HILS1	P60008	231 aa		3.68	□□□□□ -1.82
CCNL1-223	ENST00000481173	NSUN2	Q08J23	767 aa	Known RBP eCLIP	3.68	□□□□□ -1.82
CCNL1-223	ENST00000481173	CBFB	Q13951	182 aa		3.68	□□□□□ -1.82
CCNL1-223	ENST00000481173	DLGAP5	Q15398	846 aa		3.68	□□□□□ -1.82
CCNL1-223	ENST00000481173	C6orf10	Q5SRN2	563 aa		3.68	□□□□□ -1.82
CCNL1-223	ENST00000481173	FBXO38	Q6PIJ6	1188 aa		3.68	□□□□□ -1.82
CCNL1-223	ENST00000481173	RBM23	Q86U06	439 aa	Known RBP	3.68	□□□□□ -1.82
CCNL1-223	ENST00000481173	TTC30A	Q86WT1	665 aa		3.68	□□□□□ -1.82
CCNL1-223	ENST00000481173	PARD3B	Q8TEW8	1205 aa		3.68	□□□□□ -1.82
CCNL1-223	ENST00000481173	TMEM174	Q8WUU8	243 aa		3.68	□□□□□ -1.82
CCNL1-223	ENST00000481173	TMEM255B	Q8WV15	326 aa		3.68	□□□□□ -1.82
CCNL1-223	ENST00000481173	NPIPB3	Q92617	1050 aa		3.68	□□□□□ -1.82
CCNL1-223	ENST00000481173	ZNF566	Q969W8	418 aa		3.68	□□□□□ -1.82
CCNL1-223	ENST00000481173	WBP1	Q96G27	269 aa		3.68	□□□□□ -1.82
CCNL1-223	ENST00000481173	ZNF347	Q96SE7	839 aa		3.68	□□□□□ -1.82
CCNL1-223	ENST00000481173	NUDT22	Q9BRQ3	303 aa		3.68	□□□□□ -1.82
CCNL1-223	ENST00000481173	SF3B5	Q9BWJ5	86 aa	Known RBP	3.68	□□□□□ -1.82
CCNL1-223	ENST00000481173	KRTAP4-4	Q9BYR3	166 aa		3.68	□□□□□ -1.82
CCNL1-223	ENST00000481173	FZD3	Q9NPG1	666 aa		3.68	□□□□□ -1.82
CCNL1-223	ENST00000481173	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	3.68	□□□□□ -1.82
CCNL1-223	ENST00000481173	LAMP3	Q9UQV4	416 aa		3.68	□□□□□ -1.82
CCNL1-223	ENST00000481173	RHOD	O00212	210 aa		3.67	□□□□□ -1.82
CCNL1-223	ENST00000481173	PODXL	O00592	558 aa		3.67	□□□□□ -1.82
CCNL1-223	ENST00000481173	LINC01565	O15544	149 aa		3.67	□□□□□ -1.82
CCNL1-223	ENST00000481173	FGF18	O76093	207 aa		3.67	□□□□□ -1.82
CCNL1-223	ENST00000481173	NFATC1	O95644	943 aa		3.67	□□□□□ -1.82
CCNL1-223	ENST00000481173	CER1	O95813	267 aa		3.67	□□□□□ -1.82
CCNL1-223	ENST00000481173	ITGA5	P08648	1049 aa		3.67	□□□□□ -1.82
CCNL1-223	ENST00000481173	SHC2	P98077	582 aa		3.67	□□□□□ -1.82
CCNL1-223	ENST00000481173	CSHL1	Q14406	222 aa		3.67	□□□□□ -1.82
CCNL1-223	ENST00000481173	GRM4	Q14833	912 aa		3.67	□□□□□ -1.82
CCNL1-223	ENST00000481173	SLC35G1	Q2M3R5	365 aa		3.67	□□□□□ -1.82
CCNL1-223	ENST00000481173	ANKRD40	Q6AI12	368 aa		3.67	□□□□□ -1.82
CCNL1-223	ENST00000481173	NADSYN1	Q6IA69	706 aa		3.67	□□□□□ -1.82
CCNL1-223	ENST00000481173	KRTAP5-4	Q6L8H1	288 aa		3.67	□□□□□ -1.82
CCNL1-223	ENST00000481173	SLC39A5	Q6ZMH5	540 aa		3.67	□□□□□ -1.82
CCNL1-223	ENST00000481173	TRIL	Q7L0X0	811 aa		3.67	□□□□□ -1.82
CCNL1-223	ENST00000481173	SKAP1	Q86WV1	359 aa		3.67	□□□□□ -1.82
CCNL1-223	ENST00000481173	LMO3	Q8TAP4	145 aa		3.67	□□□□□ -1.82
CCNL1-223	ENST00000481173	ZFPM2	Q8WW38	1151 aa		3.67	□□□□□ -1.82
CCNL1-223	ENST00000481173	RIPOR3	Q96MK2	946 aa		3.67	□□□□□ -1.82
CCNL1-223	ENST00000481173	HTATIP2	Q9BUP3	242 aa		3.67	□□□□□ -1.82
CCNL1-223	ENST00000481173	METTL14	Q9HCE5	456 aa	Known RBP	3.67	□□□□□ -1.82
CCNL1-223	ENST00000481173	CD93	Q9NPY3	652 aa		3.67	□□□□□ -1.82
CCNL1-223	ENST00000481173	CHPF2	Q9P2E5	772 aa		3.67	□□□□□ -1.82
CCNL1-223	ENST00000481173	SLC8A2	Q9UPR5	921 aa		3.67	□□□□□ -1.82
CCNL1-223	ENST00000481173	DTNA	Q9Y4J8	743 aa		3.67	□□□□□ -1.82
CCNL1-223	ENST00000481173	TRIP12	Q14669	1992 aa	Predicted RBP	3.66	□□□□□ -1.82
CCNL1-223	ENST00000481173	PPP6R2	O75170	966 aa		3.66	□□□□□ -1.82
CCNL1-223	ENST00000481173	CNTN5	O94779	1100 aa		3.66	□□□□□ -1.82
CCNL1-223	ENST00000481173	ZNF432	O94892	652 aa		3.66	□□□□□ -1.82
CCNL1-223	ENST00000481173	SGPL1	O95470	568 aa		3.66	□□□□□ -1.82
CCNL1-223	ENST00000481173	PLG	P00747	810 aa	Predicted RBP	3.66	□□□□□ -1.82
CCNL1-223	ENST00000481173	TRIM27	P14373	513 aa		3.66	□□□□□ -1.82
CCNL1-223	ENST00000481173	EEF1G	P26641	437 aa	Known RBP	3.66	□□□□□ -1.82
CCNL1-223	ENST00000481173	GAS1	P54826	345 aa		3.66	□□□□□ -1.82
CCNL1-223	ENST00000481173	SLC4A8	Q2Y0W8	1093 aa		3.66	□□□□□ -1.82
CCNL1-223	ENST00000481173	INO80D	Q53TQ3	878 aa	Predicted RBP	3.66	□□□□□ -1.82
CCNL1-223	ENST00000481173	KIAA1755	Q5JYT7	1200 aa		3.66	□□□□□ -1.82
CCNL1-223	ENST00000481173	KSR2	Q6VAB6	950 aa		3.66	□□□□□ -1.82
CCNL1-223	ENST00000481173	DDIAS	Q8IXT1	998 aa		3.66	□□□□□ -1.82
CCNL1-223	ENST00000481173	FAM47B	Q8NA70	645 aa		3.66	□□□□□ -1.82
CCNL1-223	ENST00000481173	SRFBP1	Q8NEF9	429 aa	Known RBP	3.66	□□□□□ -1.82
CCNL1-223	ENST00000481173	KAT2A	Q92830	837 aa		3.66	□□□□□ -1.82
CCNL1-223	ENST00000481173	INPP5D	Q92835	1189 aa		3.66	□□□□□ -1.82
CCNL1-223	ENST00000481173	WDR83	Q9BRX9	315 aa	Known RBP	3.66	□□□□□ -1.82
CCNL1-223	ENST00000481173	ERVK-5	Q9HDB9	667 aa		3.66	□□□□□ -1.82
CCNL1-223	ENST00000481173	ICAM5	Q9UMF0	924 aa		3.66	□□□□□ -1.82
CCNL1-223	ENST00000481173	CEP83	Q9Y592	693 aa		3.66	□□□□□ -1.82
CCNL1-223	ENST00000481173	NTN3	O00634	580 aa	Predicted RBP	3.65	□□□□□ -1.83
CCNL1-223	ENST00000481173	NTSR2	O95665	410 aa		3.65	□□□□□ -1.83
CCNL1-223	ENST00000481173	RAB30	Q15771	203 aa		3.65	□□□□□ -1.83
CCNL1-223	ENST00000481173	LONRF1	Q17RB8	773 aa		3.65	□□□□□ -1.83
CCNL1-223	ENST00000481173	ASPHD1	Q5U4P2	390 aa		3.65	□□□□□ -1.83
CCNL1-223	ENST00000481173	ISM2	Q6H9L7	571 aa		3.65	□□□□□ -1.83
CCNL1-223	ENST00000481173	WDR93	Q6P2C0	686 aa		3.65	□□□□□ -1.83
CCNL1-223	ENST00000481173	DPP9	Q86TI2	863 aa		3.65	□□□□□ -1.83
CCNL1-223	ENST00000481173	GPSM1	Q86YR5	675 aa		3.65	□□□□□ -1.83
CCNL1-223	ENST00000481173	PJA1	Q8NG27	643 aa		3.65	□□□□□ -1.83

Retrieved 100 of 20,778 RNA–protein pairs in 24 ms