RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 KNL1Q8NG31 2342 aa15.8■□□□□ 0.12
LIMS3-203ENST00000480744 SYNJ2BP-COX16A0A087WUM0 186 aa15.79■□□□□ 0.12
LIMS3-203ENST00000480744 A0A1B0GVT2 93 aa15.79■□□□□ 0.12
LIMS3-203ENST00000480744 FSBPO95073 299 aa15.79■□□□□ 0.12
LIMS3-203ENST00000480744 ASLP04424 464 aa15.79■□□□□ 0.12
LIMS3-203ENST00000480744 SLC9A1P19634 815 aa15.79■□□□□ 0.12
LIMS3-203ENST00000480744 MATKP42679 507 aa15.79■□□□□ 0.12
LIMS3-203ENST00000480744 RPL34P49207 117 aaKnown RBP15.79■□□□□ 0.12
LIMS3-203ENST00000480744 CSNK1EP49674 416 aaKnown RBP15.79■□□□□ 0.12
LIMS3-203ENST00000480744 APBA1Q02410 837 aa15.79■□□□□ 0.12
LIMS3-203ENST00000480744 ZBTB16Q05516 673 aa15.79■□□□□ 0.12
LIMS3-203ENST00000480744 RAP1GAP2Q684P5 730 aa15.79■□□□□ 0.12
LIMS3-203ENST00000480744 DHX40Q8IX18 779 aaKnown RBP15.79■□□□□ 0.12
LIMS3-203ENST00000480744 CHCHD4Q8N4Q1 142 aa15.79■□□□□ 0.12
LIMS3-203ENST00000480744 SETD7Q8WTS6 366 aaKnown RBP15.79■□□□□ 0.12
LIMS3-203ENST00000480744 STK32AQ8WU08 396 aa15.79■□□□□ 0.12
LIMS3-203ENST00000480744 LMLNQ96KR4 655 aa15.79■□□□□ 0.12
LIMS3-203ENST00000480744 MED15Q96RN5 788 aa15.79■□□□□ 0.12
LIMS3-203ENST00000480744 FAM204AQ9H8W3 233 aa15.79■□□□□ 0.12
LIMS3-203ENST00000480744 POPDC2Q9HBU9 364 aa15.79■□□□□ 0.12
LIMS3-203ENST00000480744 CHMP5Q9NZZ3 219 aa15.79■□□□□ 0.12
LIMS3-203ENST00000480744 COX16Q9P0S2 106 aa15.79■□□□□ 0.12
LIMS3-203ENST00000480744 TJP2Q9UDY2 1190 aa15.79■□□□□ 0.12
LIMS3-203ENST00000480744 RWDD2AQ9UIY3 292 aa15.79■□□□□ 0.12
LIMS3-203ENST00000480744 INTS6Q9UL03 887 aaKnown RBP15.79■□□□□ 0.12
LIMS3-203ENST00000480744 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.79■□□□□ 0.12
LIMS3-203ENST00000480744 SLCO1B1Q9Y6L6 691 aa15.79■□□□□ 0.12
LIMS3-203ENST00000480744 RNASEH1O60930 286 aaKnown RBP15.78■□□□□ 0.12
LIMS3-203ENST00000480744 SIN3BO75182 1162 aa15.78■□□□□ 0.12
LIMS3-203ENST00000480744 LUC7L3O95232 432 aaKnown RBP15.78■□□□□ 0.12
LIMS3-203ENST00000480744 TRIM16O95361 564 aa15.78■□□□□ 0.12
LIMS3-203ENST00000480744 MOCS3O95396 460 aa15.78■□□□□ 0.12
LIMS3-203ENST00000480744 TRUB2O95900 331 aaKnown RBP15.78■□□□□ 0.12
LIMS3-203ENST00000480744 TACR2P21452 398 aa15.78■□□□□ 0.12
LIMS3-203ENST00000480744 CTSOP43234 321 aaPredicted RBP15.78■□□□□ 0.12
LIMS3-203ENST00000480744 NUMBP49757 651 aa15.78■□□□□ 0.12
LIMS3-203ENST00000480744 AFF3P51826 1226 aaKnown RBP15.78■□□□□ 0.12
LIMS3-203ENST00000480744 YWHAZP63104 245 aaKnown RBP15.78■□□□□ 0.12
LIMS3-203ENST00000480744 PITX1P78337 314 aaPredicted RBP15.78■□□□□ 0.12
LIMS3-203ENST00000480744 BNC1Q01954 994 aa15.78■□□□□ 0.12
LIMS3-203ENST00000480744 PDCLQ13371 301 aa15.78■□□□□ 0.12
LIMS3-203ENST00000480744 MEA1Q16626 185 aa15.78■□□□□ 0.12
LIMS3-203ENST00000480744 ZNF423Q2M1K9 1284 aa15.78■□□□□ 0.12
LIMS3-203ENST00000480744 HLA-BQ31612 363 aa15.78■□□□□ 0.12
LIMS3-203ENST00000480744 FSCBQ5H9T9 825 aa15.78■□□□□ 0.12
LIMS3-203ENST00000480744 PITRM1Q5JRX3 1037 aa15.78■□□□□ 0.12
LIMS3-203ENST00000480744 IL27RAQ6UWB1 636 aa15.78■□□□□ 0.12
LIMS3-203ENST00000480744 GBP6Q6ZN66 633 aa15.78■□□□□ 0.12
LIMS3-203ENST00000480744 BEND5Q7L4P6 421 aa15.78■□□□□ 0.12
LIMS3-203ENST00000480744 PASD1Q8IV76 773 aa15.78■□□□□ 0.12
LIMS3-203ENST00000480744 GATA6Q92908 595 aa15.78■□□□□ 0.12
LIMS3-203ENST00000480744 TTC17Q96AE7 1141 aa15.78■□□□□ 0.12
LIMS3-203ENST00000480744 FAM81BQ96LP2 452 aa15.78■□□□□ 0.12
LIMS3-203ENST00000480744 TMEM121BQ9BXQ6 578 aaPredicted RBP15.78■□□□□ 0.12
LIMS3-203ENST00000480744 RSPH9Q9H1X1 276 aaPredicted RBP15.78■□□□□ 0.12
LIMS3-203ENST00000480744 THAP9Q9H5L6 903 aa15.78■□□□□ 0.12
LIMS3-203ENST00000480744 TM7SF3Q9NS93 570 aa15.78■□□□□ 0.12
LIMS3-203ENST00000480744 KIAA1468Q9P260 1216 aa15.78■□□□□ 0.12
LIMS3-203ENST00000480744 ERVW-1Q9UQF0 538 aa15.78■□□□□ 0.12
LIMS3-203ENST00000480744 NCKAP1Q9Y2A7 1128 aa15.78■□□□□ 0.12
LIMS3-203ENST00000480744 FNDC3AQ9Y2H6 1198 aaKnown RBP15.78■□□□□ 0.12
LIMS3-203ENST00000480744 FAM47DPA6NHR8 397 aa15.77■□□□□ 0.12
LIMS3-203ENST00000480744 BECN2A8MW95 431 aa15.77■□□□□ 0.12
LIMS3-203ENST00000480744 TTC34A8MYJ7 566 aa15.77■□□□□ 0.12
LIMS3-203ENST00000480744 F5H5T6 163 aa15.77■□□□□ 0.12
LIMS3-203ENST00000480744 MTIF2P46199 727 aaKnown RBP15.77■□□□□ 0.12
LIMS3-203ENST00000480744 TAF5Q15542 800 aa15.77■□□□□ 0.12
LIMS3-203ENST00000480744 TEAD4Q15561 434 aa15.77■□□□□ 0.12
LIMS3-203ENST00000480744 TPD52L1Q16890 204 aaPredicted RBP15.77■□□□□ 0.12
LIMS3-203ENST00000480744 HNRNPA1L2Q32P51 320 aaKnown RBP15.77■□□□□ 0.12
LIMS3-203ENST00000480744 RNF219Q5W0B1 726 aaPredicted RBP15.77■□□□□ 0.12
LIMS3-203ENST00000480744 TMEM110Q86TL2 294 aa15.77■□□□□ 0.12
LIMS3-203ENST00000480744 PNPLA1Q8N8W4 532 aa15.77■□□□□ 0.12
LIMS3-203ENST00000480744 ATP6V0D2Q8N8Y2 350 aa15.77■□□□□ 0.12
LIMS3-203ENST00000480744 C1orf216Q8TAB5 229 aa15.77■□□□□ 0.12
LIMS3-203ENST00000480744 ZCCHC14Q8WYQ9 949 aaKnown RBP15.77■□□□□ 0.12
LIMS3-203ENST00000480744 RNF34Q969K3 372 aa15.77■□□□□ 0.12
LIMS3-203ENST00000480744 BIRC7Q96CA5 298 aa15.77■□□□□ 0.12
LIMS3-203ENST00000480744 MYO19Q96H55 970 aa15.77■□□□□ 0.12
LIMS3-203ENST00000480744 BTN2A3PQ96KV6 586 aa15.77■□□□□ 0.12
LIMS3-203ENST00000480744 MRGPRX3Q96LB0 322 aa15.77■□□□□ 0.12
LIMS3-203ENST00000480744 PABPC3Q9H361 631 aaKnown RBP15.77■□□□□ 0.12
LIMS3-203ENST00000480744 SGK2Q9HBY8 427 aa15.77■□□□□ 0.12
LIMS3-203ENST00000480744 TM9SF3Q9HD45 589 aa15.77■□□□□ 0.12
LIMS3-203ENST00000480744 FBXL12Q9NXK8 326 aa15.77■□□□□ 0.12
LIMS3-203ENST00000480744 KIAA1522Q9P206 1035 aaPredicted RBP15.77■□□□□ 0.12
LIMS3-203ENST00000480744 APEX2Q9UBZ4 518 aa15.77■□□□□ 0.12
LIMS3-203ENST00000480744 SLC12A6Q9UHW9 1150 aa15.77■□□□□ 0.12
LIMS3-203ENST00000480744 MSRB2Q9Y3D2 182 aa15.77■□□□□ 0.12
LIMS3-203ENST00000480744 CABIN1Q9Y6J0 2220 aa15.77■□□□□ 0.12
LIMS3-203ENST00000480744 PTPRBP23467 1997 aa15.76■□□□□ 0.11
LIMS3-203ENST00000480744 TMEM8BA6NDV4 472 aa15.76■□□□□ 0.11
LIMS3-203ENST00000480744 GRAP2O75791 330 aa15.76■□□□□ 0.11
LIMS3-203ENST00000480744 FTH1P19P0C7X4 201 aa15.76■□□□□ 0.11
LIMS3-203ENST00000480744 UBE2HP62256 183 aa15.76■□□□□ 0.11
LIMS3-203ENST00000480744 CDK17Q00537 523 aa15.76■□□□□ 0.11
LIMS3-203ENST00000480744 ECT2LQ008S8 904 aa15.76■□□□□ 0.11
LIMS3-203ENST00000480744 EXOC3L4Q17RC7 722 aa15.76■□□□□ 0.11
LIMS3-203ENST00000480744 KIF19Q2TAC6 998 aa15.76■□□□□ 0.11
LIMS3-203ENST00000480744 LAYNQ6UX15 382 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms