RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 ARL14EPQ8N8R7 260 aaPredicted RBP5.82□□□□□ -1.48
CALD1-219ENST00000480638 EXD3Q8N9H8 876 aa5.82□□□□□ -1.48
CALD1-219ENST00000480638 OTUD7AQ8TE49 926 aaPredicted RBP5.82□□□□□ -1.48
CALD1-219ENST00000480638 CLEC4CQ8WTT0 213 aa5.82□□□□□ -1.48
CALD1-219ENST00000480638 ZNF347Q96SE7 839 aa5.82□□□□□ -1.48
CALD1-219ENST00000480638 ARPC5LQ9BPX5 153 aa5.82□□□□□ -1.48
CALD1-219ENST00000480638 HTATIP2Q9BUP3 242 aa5.82□□□□□ -1.48
CALD1-219ENST00000480638 SORBS1Q9BX66 1292 aaKnown RBP5.82□□□□□ -1.48
CALD1-219ENST00000480638 TMEM120AQ9BXJ8 343 aa5.82□□□□□ -1.48
CALD1-219ENST00000480638 BRD8Q9H0E9 1235 aa5.82□□□□□ -1.48
CALD1-219ENST00000480638 SFXN1Q9H9B4 322 aa5.82□□□□□ -1.48
CALD1-219ENST00000480638 PAPOLBQ9NRJ5 636 aaKnown RBP5.82□□□□□ -1.48
CALD1-219ENST00000480638 TMEM45AQ9NWC5 275 aa5.82□□□□□ -1.48
CALD1-219ENST00000480638 COPG1Q9Y678 874 aaKnown RBP5.82□□□□□ -1.48
CALD1-219ENST00000480638 AGAP5A6NIR3 686 aa5.81□□□□□ -1.48
CALD1-219ENST00000480638 HEXIM1O94992 359 aaKnown RBP5.81□□□□□ -1.48
CALD1-219ENST00000480638 ALDOCP09972 364 aaKnown RBP5.81□□□□□ -1.48
CALD1-219ENST00000480638 SRSF1Q07955 248 aaKnown RBP eCLIP5.81□□□□□ -1.48
CALD1-219ENST00000480638 PGM5Q15124 567 aa5.81□□□□□ -1.48
CALD1-219ENST00000480638 RPS6KA2Q15349 733 aa5.81□□□□□ -1.48
CALD1-219ENST00000480638 GALNTL6Q49A17 601 aa5.81□□□□□ -1.48
CALD1-219ENST00000480638 PIP4P1Q86T03 277 aa5.81□□□□□ -1.48
CALD1-219ENST00000480638 ADGRF4Q8IZF3 695 aa5.81□□□□□ -1.48
CALD1-219ENST00000480638 MYCT1Q8N699 235 aa5.81□□□□□ -1.48
CALD1-219ENST00000480638 CPT1BQ92523 772 aa5.81□□□□□ -1.48
CALD1-219ENST00000480638 TMEM79Q9BSE2 394 aa5.81□□□□□ -1.48
CALD1-219ENST00000480638 DDX23Q9BUQ8 820 aaKnown RBP5.81□□□□□ -1.48
CALD1-219ENST00000480638 OSBPL5Q9H0X9 879 aaPredicted RBP5.81□□□□□ -1.48
CALD1-219ENST00000480638 PTPRHQ9HD43 1115 aa5.81□□□□□ -1.48
CALD1-219ENST00000480638 ELOVL5Q9NYP7 299 aa5.81□□□□□ -1.48
CALD1-219ENST00000480638 AFG3L2Q9Y4W6 797 aa5.81□□□□□ -1.48
CALD1-219ENST00000480638 F8W810 466 aa5.8□□□□□ -1.48
CALD1-219ENST00000480638 PRF1P14222 555 aa5.8□□□□□ -1.48
CALD1-219ENST00000480638 LMO1P25800 156 aa5.8□□□□□ -1.48
CALD1-219ENST00000480638 SERPINA4P29622 427 aa5.8□□□□□ -1.48
CALD1-219ENST00000480638 PTGER1P34995 402 aa5.8□□□□□ -1.48
CALD1-219ENST00000480638 RCAN1P53805 252 aa5.8□□□□□ -1.48
CALD1-219ENST00000480638 B4GALNT1Q00973 533 aa5.8□□□□□ -1.48
CALD1-219ENST00000480638 TBRG1Q3YBR2 411 aa5.8□□□□□ -1.48
CALD1-219ENST00000480638 JMJD6Q6NYC1 403 aaPredicted RBP5.8□□□□□ -1.48
CALD1-219ENST00000480638 PAQR4Q8N4S7 273 aaPredicted RBP5.8□□□□□ -1.48
CALD1-219ENST00000480638 FAM47BQ8NA70 645 aa5.8□□□□□ -1.48
CALD1-219ENST00000480638 SLC2A12Q8TD20 617 aa5.8□□□□□ -1.48
CALD1-219ENST00000480638 SCARB1Q8WTV0 552 aa5.8□□□□□ -1.48
CALD1-219ENST00000480638 ATP2A3Q93084 1043 aa5.8□□□□□ -1.48
CALD1-219ENST00000480638 C3orf49Q96BT1 292 aa5.8□□□□□ -1.48
CALD1-219ENST00000480638 TRAPPC9Q96Q05 1148 aa5.8□□□□□ -1.48
CALD1-219ENST00000480638 PIMREGQ9BSJ6 248 aa5.8□□□□□ -1.48
CALD1-219ENST00000480638 SEPSECSQ9HD40 501 aaKnown RBP5.8□□□□□ -1.48
CALD1-219ENST00000480638 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.8□□□□□ -1.48
CALD1-219ENST00000480638 NDUFAF4Q9P032 175 aa5.8□□□□□ -1.48
CALD1-219ENST00000480638 IPO11Q9UI26 975 aaKnown RBP5.8□□□□□ -1.48
CALD1-219ENST00000480638 TTBK1Q5TCY1 1321 aaPredicted RBP5.79□□□□□ -1.48
CALD1-219ENST00000480638 ZNF521Q96K83 1311 aa5.79□□□□□ -1.48
CALD1-219ENST00000480638 LMTK3Q96Q04 1460 aa5.79□□□□□ -1.48
CALD1-219ENST00000480638 IPO5O00410 1097 aaKnown RBP5.79□□□□□ -1.48
CALD1-219ENST00000480638 UGDHO60701 494 aa5.79□□□□□ -1.48
CALD1-219ENST00000480638 MTX1Q13505 466 aa5.79□□□□□ -1.48
CALD1-219ENST00000480638 PDCD2Q16342 344 aaPredicted RBP5.79□□□□□ -1.48
CALD1-219ENST00000480638 TIGD6Q17RP2 521 aa5.79□□□□□ -1.48
CALD1-219ENST00000480638 KIAA1755Q5JYT7 1200 aa5.79□□□□□ -1.48
CALD1-219ENST00000480638 DGAT2L7PQ6IED9 249 aa5.79□□□□□ -1.48
CALD1-219ENST00000480638 ERAP2Q6P179 960 aa5.79□□□□□ -1.48
CALD1-219ENST00000480638 RTL10Q7L3V2 364 aa5.79□□□□□ -1.48
CALD1-219ENST00000480638 RRAGAQ7L523 313 aa5.79□□□□□ -1.48
CALD1-219ENST00000480638 MDGA2Q7Z553 956 aa5.79□□□□□ -1.48
CALD1-219ENST00000480638 MRPL10Q7Z7H8 261 aaKnown RBP5.79□□□□□ -1.48
CALD1-219ENST00000480638 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.79□□□□□ -1.48
CALD1-219ENST00000480638 ZFYVE19Q96K21 471 aa5.79□□□□□ -1.48
CALD1-219ENST00000480638 ZNF48Q96MX3 618 aaPredicted RBP5.79□□□□□ -1.48
CALD1-219ENST00000480638 TUBB6Q9BUF5 446 aa5.79□□□□□ -1.48
CALD1-219ENST00000480638 HEY2Q9UBP5 337 aa5.79□□□□□ -1.48
CALD1-219ENST00000480638 SRP68Q9UHB9 627 aaKnown RBP5.79□□□□□ -1.48
CALD1-219ENST00000480638 SLC8A2Q9UPR5 921 aa5.79□□□□□ -1.48
CALD1-219ENST00000480638 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.79□□□□□ -1.48
CALD1-219ENST00000480638 PCDHA10Q9Y5I2 948 aa5.79□□□□□ -1.48
CALD1-219ENST00000480638 TRBV5-3A0A0A0MS03 114 aa5.78□□□□□ -1.48
CALD1-219ENST00000480638 hCG_1642624A0A1W2PR95 340 aa5.78□□□□□ -1.48
CALD1-219ENST00000480638 HMX3A6NHT5 357 aa5.78□□□□□ -1.48
CALD1-219ENST00000480638 H0Y3Z8 333 aa5.78□□□□□ -1.48
CALD1-219ENST00000480638 SOCS2O14508 198 aa5.78□□□□□ -1.48
CALD1-219ENST00000480638 TCEA3O75764 348 aa5.78□□□□□ -1.48
CALD1-219ENST00000480638 CYP21A2P08686 494 aa5.78□□□□□ -1.48
CALD1-219ENST00000480638 CST5P28325 142 aaPredicted RBP5.78□□□□□ -1.48
CALD1-219ENST00000480638 PLCD1P51178 756 aa5.78□□□□□ -1.48
CALD1-219ENST00000480638 PRKAA2P54646 552 aa5.78□□□□□ -1.48
CALD1-219ENST00000480638 GRAMD1BQ3KR37 738 aa5.78□□□□□ -1.48
CALD1-219ENST00000480638 KIAA1324Q6UXG2 1013 aaKnown RBP5.78□□□□□ -1.48
CALD1-219ENST00000480638 LRIG3Q6UXM1 1119 aa5.78□□□□□ -1.48
CALD1-219ENST00000480638 RINLQ6ZS11 566 aa5.78□□□□□ -1.48
CALD1-219ENST00000480638 NRACQ8N912 160 aa5.78□□□□□ -1.48
CALD1-219ENST00000480638 TRAPPC12Q8WVT3 735 aa5.78□□□□□ -1.48
CALD1-219ENST00000480638 NPAS1Q99742 590 aa5.78□□□□□ -1.48
CALD1-219ENST00000480638 TRMOQ9BU70 441 aa5.78□□□□□ -1.48
CALD1-219ENST00000480638 ABHD16BQ9H3Z7 469 aa5.78□□□□□ -1.48
CALD1-219ENST00000480638 TXNRD2Q9NNW7 524 aa5.78□□□□□ -1.48
CALD1-219ENST00000480638 AGO2Q9UKV8 859 aaKnown RBP5.78□□□□□ -1.48
CALD1-219ENST00000480638 ZNF335Q9H4Z2 1342 aaPredicted RBP5.77□□□□□ -1.49
CALD1-219ENST00000480638 LY6G6EA0A0G2JKS1 128 aa5.77□□□□□ -1.49
CALD1-219ENST00000480638 MCIDASD6RGH6 385 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms