RNA–Protein interactions for RNA: ENST00000480209.1

NUDCD3-208, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-208ENST00000480209 NLRP14Q86W24 1093 aa9.25□□□□□ -0.93
NUDCD3-208ENST00000480209 SLC13A5Q86YT5 568 aaPredicted RBP9.25□□□□□ -0.93
NUDCD3-208ENST00000480209 RCOR2Q8IZ40 523 aa9.25□□□□□ -0.93
NUDCD3-208ENST00000480209 LGI2Q8N0V4 545 aa9.25□□□□□ -0.93
NUDCD3-208ENST00000480209 CFAP52Q8N1V2 620 aa9.25□□□□□ -0.93
NUDCD3-208ENST00000480209 CELF5Q8N6W0 485 aaKnown RBP9.25□□□□□ -0.93
NUDCD3-208ENST00000480209 KCTD6Q8NC69 237 aa9.25□□□□□ -0.93
NUDCD3-208ENST00000480209 LRRN4CLQ8ND94 238 aa9.25□□□□□ -0.93
NUDCD3-208ENST00000480209 OR52K2Q8NGK3 314 aa9.25□□□□□ -0.93
NUDCD3-208ENST00000480209 MAFAQ8NHW3 353 aaPredicted RBP9.25□□□□□ -0.93
NUDCD3-208ENST00000480209 KIF18AQ8NI77 898 aa9.25□□□□□ -0.93
NUDCD3-208ENST00000480209 HLA-CQ95604 372 aa9.25□□□□□ -0.93
NUDCD3-208ENST00000480209 AZIN2Q96A70 460 aa9.25□□□□□ -0.93
NUDCD3-208ENST00000480209 HAUS1Q96CS2 278 aa9.25□□□□□ -0.93
NUDCD3-208ENST00000480209 TBC1D31Q96DN5 1066 aa9.25□□□□□ -0.93
NUDCD3-208ENST00000480209 ZFYVE19Q96K21 471 aa9.25□□□□□ -0.93
NUDCD3-208ENST00000480209 NECTIN4Q96NY8 510 aa9.25□□□□□ -0.93
NUDCD3-208ENST00000480209 RNF157Q96PX1 679 aa9.25□□□□□ -0.93
NUDCD3-208ENST00000480209 FAM118BQ9BPY3 351 aa9.25□□□□□ -0.93
NUDCD3-208ENST00000480209 OSBPL8Q9BZF1 889 aa9.25□□□□□ -0.93
NUDCD3-208ENST00000480209 KLC2Q9H0B6 622 aa9.25□□□□□ -0.93
NUDCD3-208ENST00000480209 LINC00597Q9H2U6 94 aa9.25□□□□□ -0.93
NUDCD3-208ENST00000480209 NOL6Q9H6R4 1146 aaKnown RBP9.25□□□□□ -0.93
NUDCD3-208ENST00000480209 KIF9Q9HAQ2 790 aa9.25□□□□□ -0.93
NUDCD3-208ENST00000480209 MPP6Q9NZW5 540 aa9.25□□□□□ -0.93
NUDCD3-208ENST00000480209 RCOR3Q9P2K3 495 aaPredicted RBP9.25□□□□□ -0.93
NUDCD3-208ENST00000480209 ZMYM5Q9UJ78 669 aa9.25□□□□□ -0.93
NUDCD3-208ENST00000480209 ZFP37Q9Y6Q3 630 aaPredicted RBP9.25□□□□□ -0.93
NUDCD3-208ENST00000480209 DRGXA6NNA5 263 aa9.24□□□□□ -0.93
NUDCD3-208ENST00000480209 ZNF487B1APH4 448 aa9.24□□□□□ -0.93
NUDCD3-208ENST00000480209 ANHXE9PGG2 379 aa9.24□□□□□ -0.93
NUDCD3-208ENST00000480209 F5H5T6 163 aa9.24□□□□□ -0.93
NUDCD3-208ENST00000480209 H3BRJ5 948 aa9.24□□□□□ -0.93
NUDCD3-208ENST00000480209 CST8O60676 142 aa9.24□□□□□ -0.93
NUDCD3-208ENST00000480209 MAP3K6O95382 1288 aa9.24□□□□□ -0.93
NUDCD3-208ENST00000480209 FGGP02679 453 aa9.24□□□□□ -0.93
NUDCD3-208ENST00000480209 TUBB4AP04350 444 aa9.24□□□□□ -0.93
NUDCD3-208ENST00000480209 CYP17A1P05093 508 aa9.24□□□□□ -0.93
NUDCD3-208ENST00000480209 IL9P15248 144 aa9.24□□□□□ -0.93
NUDCD3-208ENST00000480209 ARSAP15289 507 aa9.24□□□□□ -0.93
NUDCD3-208ENST00000480209 ERCC2P18074 760 aa9.24□□□□□ -0.93
NUDCD3-208ENST00000480209 HOXD9P28356 352 aaPredicted RBP9.24□□□□□ -0.93
NUDCD3-208ENST00000480209 EPHB2P29323 1055 aa9.24□□□□□ -0.93
NUDCD3-208ENST00000480209 GBE1Q04446 702 aa9.24□□□□□ -0.93
NUDCD3-208ENST00000480209 SLC10A2Q12908 348 aaPredicted RBP9.24□□□□□ -0.93
NUDCD3-208ENST00000480209 GRM2Q14416 872 aa9.24□□□□□ -0.93
NUDCD3-208ENST00000480209 SMAD2Q15796 467 aaKnown RBP9.24□□□□□ -0.93
NUDCD3-208ENST00000480209 GAB4Q2WGN9 574 aa9.24□□□□□ -0.93
NUDCD3-208ENST00000480209 C5orf22Q49AR2 442 aa9.24□□□□□ -0.93
NUDCD3-208ENST00000480209 FAM182AQ5T1J6 154 aa9.24□□□□□ -0.93
NUDCD3-208ENST00000480209 BBS12Q6ZW61 710 aa9.24□□□□□ -0.93
NUDCD3-208ENST00000480209 VSIG1Q86XK7 387 aa9.24□□□□□ -0.93
NUDCD3-208ENST00000480209 DDX42Q86XP3 938 aaKnown RBP eCLIP9.24□□□□□ -0.93
NUDCD3-208ENST00000480209 RFX6Q8HWS3 928 aa9.24□□□□□ -0.93
NUDCD3-208ENST00000480209 ARHGAP12Q8IWW6 846 aa9.24□□□□□ -0.93
NUDCD3-208ENST00000480209 CPXM2Q8N436 756 aa9.24□□□□□ -0.93
NUDCD3-208ENST00000480209 CCDC33Q8N5R6 958 aa9.24□□□□□ -0.93
NUDCD3-208ENST00000480209 WFDC5Q8TCV5 224 aa9.24□□□□□ -0.93
NUDCD3-208ENST00000480209 BPIFB1Q8TDL5 484 aa9.24□□□□□ -0.93
NUDCD3-208ENST00000480209 LRRN4Q8WUT4 740 aa9.24□□□□□ -0.93
NUDCD3-208ENST00000480209 RSAD2Q8WXG1 361 aa9.24□□□□□ -0.93
NUDCD3-208ENST00000480209 BHMTQ93088 406 aa9.24□□□□□ -0.93
NUDCD3-208ENST00000480209 PBKQ96KB5 322 aa9.24□□□□□ -0.93
NUDCD3-208ENST00000480209 C1orf74Q96LT6 269 aa9.24□□□□□ -0.93
NUDCD3-208ENST00000480209 RPRD1AQ96P16 312 aaPredicted RBP9.24□□□□□ -0.93
NUDCD3-208ENST00000480209 EPAS1Q99814 870 aa9.24□□□□□ -0.93
NUDCD3-208ENST00000480209 DCLK3Q9C098 648 aa9.24□□□□□ -0.93
NUDCD3-208ENST00000480209 HPS4Q9NQG7 708 aa9.24□□□□□ -0.93
NUDCD3-208ENST00000480209 EPS15L1Q9UBC2 864 aa9.24□□□□□ -0.93
NUDCD3-208ENST00000480209 SAE1Q9UBE0 346 aaPredicted RBP9.24□□□□□ -0.93
NUDCD3-208ENST00000480209 PPARGC1AQ9UBK2 798 aaKnown RBP9.24□□□□□ -0.93
NUDCD3-208ENST00000480209 CDC23Q9UJX2 597 aa9.24□□□□□ -0.93
NUDCD3-208ENST00000480209 LSM7Q9UK45 103 aaKnown RBP9.24□□□□□ -0.93
NUDCD3-208ENST00000480209 CLEC4EQ9ULY5 219 aa9.24□□□□□ -0.93
NUDCD3-208ENST00000480209 NUMBLQ9Y6R0 609 aa9.24□□□□□ -0.93
NUDCD3-208ENST00000480209 ANKRD36A6QL64 1941 aa9.23□□□□□ -0.93
NUDCD3-208ENST00000480209 OTOL1A6NHN0 477 aaPredicted RBP9.23□□□□□ -0.93
NUDCD3-208ENST00000480209 PGRMC1O00264 195 aaKnown RBP9.23□□□□□ -0.93
NUDCD3-208ENST00000480209 APOL1O14791 398 aa9.23□□□□□ -0.93
NUDCD3-208ENST00000480209 ARL4AP40617 200 aa9.23□□□□□ -0.93
NUDCD3-208ENST00000480209 HCAR3P49019 387 aa9.23□□□□□ -0.93
NUDCD3-208ENST00000480209 NUMBP49757 651 aa9.23□□□□□ -0.93
NUDCD3-208ENST00000480209 COPS2P61201 443 aa9.23□□□□□ -0.93
NUDCD3-208ENST00000480209 OTUD4Q01804 1114 aaKnown RBP9.23□□□□□ -0.93
NUDCD3-208ENST00000480209 TNK2Q07912 1038 aa9.23□□□□□ -0.93
NUDCD3-208ENST00000480209 FCHO2Q0JRZ9 810 aa9.23□□□□□ -0.93
NUDCD3-208ENST00000480209 EML3Q32P44 896 aa9.23□□□□□ -0.93
NUDCD3-208ENST00000480209 FYB2Q5VWT5 728 aa9.23□□□□□ -0.93
NUDCD3-208ENST00000480209 RNF43Q68DV7 783 aa9.23□□□□□ -0.93
NUDCD3-208ENST00000480209 NAIF1Q69YI7 327 aaPredicted RBP9.23□□□□□ -0.93
NUDCD3-208ENST00000480209 PTCRAQ6ISU1 281 aaPredicted RBP9.23□□□□□ -0.93
NUDCD3-208ENST00000480209 RWDD4Q6NW29 188 aaKnown RBP9.23□□□□□ -0.93
NUDCD3-208ENST00000480209 C1orf228Q6PIY5 440 aa9.23□□□□□ -0.93
NUDCD3-208ENST00000480209 TPGS1Q6ZTW0 290 aa9.23□□□□□ -0.93
NUDCD3-208ENST00000480209 B4GALNT4Q76KP1 1039 aa9.23□□□□□ -0.93
NUDCD3-208ENST00000480209 TFAP2DQ7Z6R9 452 aa9.23□□□□□ -0.93
NUDCD3-208ENST00000480209 TMEM25Q86YD3 366 aa9.23□□□□□ -0.93
NUDCD3-208ENST00000480209 RTL3Q8N8U3 475 aaKnown RBP9.23□□□□□ -0.93
NUDCD3-208ENST00000480209 PRELID2Q8N945 189 aa9.23□□□□□ -0.93
NUDCD3-208ENST00000480209 TDRD5Q8NAT2 981 aaKnown RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms