RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 ABHD17AQ96GS6 310 aa12.42□□□□□ -0.42
USP11-208ENST00000480104 HPDLQ96IR7 371 aa12.42□□□□□ -0.42
USP11-208ENST00000480104 IKZF4Q9H2S9 585 aa12.42□□□□□ -0.42
USP11-208ENST00000480104 SNX25Q9H3E2 840 aa12.42□□□□□ -0.42
USP11-208ENST00000480104 SUN2Q9UH99 717 aa12.42□□□□□ -0.42
USP11-208ENST00000480104 CYTH4Q9UIA0 394 aa12.42□□□□□ -0.42
USP11-208ENST00000480104 MYH11P35749 1972 aa12.41□□□□□ -0.42
USP11-208ENST00000480104 UBE4BO95155 1302 aa12.41□□□□□ -0.42
USP11-208ENST00000480104 TBC1D3DA0A087WVF3 549 aa12.41□□□□□ -0.42
USP11-208ENST00000480104 TBC1D3IA0A087WXS9 549 aa12.41□□□□□ -0.42
USP11-208ENST00000480104 TBC1D3EA0A087X179 549 aa12.41□□□□□ -0.42
USP11-208ENST00000480104 TBC1D3KA0A087X1G2 549 aa12.41□□□□□ -0.42
USP11-208ENST00000480104 TBC1D3FA6NER0 549 aaPredicted RBP12.41□□□□□ -0.42
USP11-208ENST00000480104 TBC1D3LB9A6J9 549 aa12.41□□□□□ -0.42
USP11-208ENST00000480104 MUSKO15146 869 aa12.41□□□□□ -0.42
USP11-208ENST00000480104 TBC1D3HP0C7X1 549 aa12.41□□□□□ -0.42
USP11-208ENST00000480104 JMJD7P0C870 316 aa12.41□□□□□ -0.42
USP11-208ENST00000480104 GOT1P17174 413 aa12.41□□□□□ -0.42
USP11-208ENST00000480104 HOXD9P28356 352 aaPredicted RBP12.41□□□□□ -0.42
USP11-208ENST00000480104 CORO1AP31146 461 aaKnown RBP12.41□□□□□ -0.42
USP11-208ENST00000480104 SLC6A4P31645 630 aa12.41□□□□□ -0.42
USP11-208ENST00000480104 SLC8A1P32418 973 aa12.41□□□□□ -0.42
USP11-208ENST00000480104 GNL1P36915 607 aaPredicted RBP12.41□□□□□ -0.42
USP11-208ENST00000480104 PLA2G4AP47712 749 aa12.41□□□□□ -0.42
USP11-208ENST00000480104 PDE4CQ08493 712 aa12.41□□□□□ -0.42
USP11-208ENST00000480104 C10orf120Q5SQS8 335 aa12.41□□□□□ -0.42
USP11-208ENST00000480104 TBC1D3GQ6DHY5 549 aa12.41□□□□□ -0.42
USP11-208ENST00000480104 TBC1D3CQ6IPX1 549 aa12.41□□□□□ -0.42
USP11-208ENST00000480104 FAM35AQ86V20 835 aa12.41□□□□□ -0.42
USP11-208ENST00000480104 BRSK2Q8IWQ3 736 aa12.41□□□□□ -0.42
USP11-208ENST00000480104 TBC1D3Q8IZP1 549 aaPredicted RBP12.41□□□□□ -0.42
USP11-208ENST00000480104 JPH3Q8WXH2 748 aaPredicted RBP12.41□□□□□ -0.42
USP11-208ENST00000480104 NANOS1Q8WY41 292 aaKnown RBP12.41□□□□□ -0.42
USP11-208ENST00000480104 MYOCQ99972 504 aa12.41□□□□□ -0.42
USP11-208ENST00000480104 FOXP3Q9BZS1 431 aa12.41□□□□□ -0.42
USP11-208ENST00000480104 PREBQ9HCU5 417 aa12.41□□□□□ -0.42
USP11-208ENST00000480104 DMAP1Q9NPF5 467 aaPredicted RBP12.41□□□□□ -0.42
USP11-208ENST00000480104 ABCB8Q9NUT2 735 aa12.41□□□□□ -0.42
USP11-208ENST00000480104 NCKIPSDQ9NZQ3 722 aa12.41□□□□□ -0.42
USP11-208ENST00000480104 DMTF1Q9Y222 760 aa12.41□□□□□ -0.42
USP11-208ENST00000480104 ZNF510Q9Y2H8 683 aa12.41□□□□□ -0.42
USP11-208ENST00000480104 STYXL1Q9Y6J8 313 aa12.41□□□□□ -0.42
USP11-208ENST00000480104 TDRD6O60522 2096 aaKnown RBP12.41□□□□□ -0.42
USP11-208ENST00000480104 SLC12A8A0AV02 714 aa12.4□□□□□ -0.42
USP11-208ENST00000480104 ITIH1P19827 911 aa12.4□□□□□ -0.42
USP11-208ENST00000480104 NR1D1P20393 614 aa12.4□□□□□ -0.42
USP11-208ENST00000480104 NAA30Q147X3 362 aaPredicted RBP12.4□□□□□ -0.42
USP11-208ENST00000480104 NR0B2Q15466 257 aa12.4□□□□□ -0.42
USP11-208ENST00000480104 ZNF542PQ5EBM4 170 aa12.4□□□□□ -0.42
USP11-208ENST00000480104 MBLAC2Q68D91 279 aa12.4□□□□□ -0.42
USP11-208ENST00000480104 SLFN12LQ6IEE8 588 aa12.4□□□□□ -0.42
USP11-208ENST00000480104 KLHDC10Q6PID8 442 aa12.4□□□□□ -0.42
USP11-208ENST00000480104 SND1Q7KZF4 910 aaKnown RBP eCLIP12.4□□□□□ -0.42
USP11-208ENST00000480104 EFCAB3Q8N7B9 438 aa12.4□□□□□ -0.42
USP11-208ENST00000480104 B3GALNT2Q8NCR0 500 aa12.4□□□□□ -0.42
USP11-208ENST00000480104 ZSWIM2Q8NEG5 633 aa12.4□□□□□ -0.42
USP11-208ENST00000480104 ZNF548Q8NEK5 533 aaPredicted RBP12.4□□□□□ -0.42
USP11-208ENST00000480104 WDR48Q8TAF3 677 aa12.4□□□□□ -0.42
USP11-208ENST00000480104 POMGNT1Q8WZA1 660 aa12.4□□□□□ -0.42
USP11-208ENST00000480104 FAM213AQ9BRX8 229 aa12.4□□□□□ -0.42
USP11-208ENST00000480104 CALN1Q9BXU9 219 aa12.4□□□□□ -0.42
USP11-208ENST00000480104 STRADBQ9C0K7 418 aa12.4□□□□□ -0.42
USP11-208ENST00000480104 NMUR1Q9HB89 426 aa12.4□□□□□ -0.42
USP11-208ENST00000480104 COMMD8Q9NX08 183 aa12.4□□□□□ -0.42
USP11-208ENST00000480104 GGA2Q9UJY4 613 aa12.4□□□□□ -0.42
USP11-208ENST00000480104 AGO1Q9UL18 857 aaKnown RBP12.4□□□□□ -0.42
USP11-208ENST00000480104 DCHS2Q6V1P9 2916 aa12.4□□□□□ -0.42
USP11-208ENST00000480104 A0A1W2PQ27 194 aa12.39□□□□□ -0.43
USP11-208ENST00000480104 A0A1W2PQ64 194 aa12.39□□□□□ -0.43
USP11-208ENST00000480104 A0A1W2PQC6 194 aa12.39□□□□□ -0.43
USP11-208ENST00000480104 PRAMEF26H0Y7S4 382 aa12.39□□□□□ -0.43
USP11-208ENST00000480104 AGRPO00253 132 aa12.39□□□□□ -0.43
USP11-208ENST00000480104 NTN3O00634 580 aaPredicted RBP12.39□□□□□ -0.43
USP11-208ENST00000480104 CTDNEP1O95476 244 aa12.39□□□□□ -0.43
USP11-208ENST00000480104 HMBSP08397 361 aa12.39□□□□□ -0.43
USP11-208ENST00000480104 PABPC1P11940 636 aaKnown RBP12.39□□□□□ -0.43
USP11-208ENST00000480104 SCP2P22307 547 aa12.39□□□□□ -0.43
USP11-208ENST00000480104 NUDT1P36639 197 aa12.39□□□□□ -0.43
USP11-208ENST00000480104 SLC12A3P55017 1021 aa12.39□□□□□ -0.43
USP11-208ENST00000480104 GNL2Q13823 731 aaKnown RBP12.39□□□□□ -0.43
USP11-208ENST00000480104 ZRSR1Q15695 479 aaKnown RBP12.39□□□□□ -0.43
USP11-208ENST00000480104 HNRNPA1L2Q32P51 320 aaKnown RBP12.39□□□□□ -0.43
USP11-208ENST00000480104 KRT79Q5XKE5 535 aa12.39□□□□□ -0.43
USP11-208ENST00000480104 AHI1Q8N157 1196 aa12.39□□□□□ -0.43
USP11-208ENST00000480104 IGSF22Q8N9C0 903 aa12.39□□□□□ -0.43
USP11-208ENST00000480104 TMEM145Q8NBT3 493 aa12.39□□□□□ -0.43
USP11-208ENST00000480104 OR13H1Q8NG92 308 aa12.39□□□□□ -0.43
USP11-208ENST00000480104 PDCD6IPQ8WUM4 868 aaKnown RBP12.39□□□□□ -0.43
USP11-208ENST00000480104 WASF1Q92558 559 aa12.39□□□□□ -0.43
USP11-208ENST00000480104 MARVELD3Q96A59 401 aa12.39□□□□□ -0.43
USP11-208ENST00000480104 MYO19Q96H55 970 aa12.39□□□□□ -0.43
USP11-208ENST00000480104 CCDC3Q9BQI4 270 aa12.39□□□□□ -0.43
USP11-208ENST00000480104 MMTAG2Q9BU76 263 aaKnown RBP12.39□□□□□ -0.43
USP11-208ENST00000480104 DNAJC28Q9NX36 388 aa12.39□□□□□ -0.43
USP11-208ENST00000480104 TP53TG5Q9Y2B4 290 aa12.39□□□□□ -0.43
USP11-208ENST00000480104 LOXL2Q9Y4K0 774 aa12.39□□□□□ -0.43
USP11-208ENST00000480104 DOCK9Q9BZ29 2069 aa12.39□□□□□ -0.43
USP11-208ENST00000480104 ATP8B3O60423 1300 aa12.38□□□□□ -0.43
USP11-208ENST00000480104 A0A1W2PQH9 124 aa12.38□□□□□ -0.43
USP11-208ENST00000480104 ATP5BP06576 529 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms