RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 MYO6Q9UM54 1294 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 CXorf51AA0A1B0GTR3 108 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 FAM221AA4D161 298 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 TRIM49BA6NDI0 452 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.14□□□□□ -1.59
PTCD3-213ENST00000480102 NPC1O15118 1278 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 HOXC11O43248 304 aaPredicted RBP5.14□□□□□ -1.59
PTCD3-213ENST00000480102 MED7O43513 233 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 ATG13O75143 517 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 ATP2C2O75185 946 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 CSPG5O95196 566 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 NFATC1O95644 943 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 PF4P02776 101 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 PDGFRBP09619 1106 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 TRIM49P0CI25 452 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 TRIM49CP0CI26 452 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 CD8BP10966 210 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 MYL4P12829 197 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 HDCP19113 662 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 DRD1P21728 446 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 ACAT1P24752 427 aaKnown RBP5.14□□□□□ -1.59
PTCD3-213ENST00000480102 CDH5P33151 784 aaPredicted RBP5.14□□□□□ -1.59
PTCD3-213ENST00000480102 CNR2P34972 360 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 NBL1P41271 181 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 ACADSBP45954 432 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 MFAP3P55082 362 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 PSMC1P62191 440 aaKnown RBP5.14□□□□□ -1.59
PTCD3-213ENST00000480102 NTHL1P78549 312 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 COG7P83436 770 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 MYL5Q02045 173 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 GOLGA8FQ08AF8 430 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 GOLGA8DPQ0D2H9 430 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 BST2Q10589 180 aaKnown RBP5.14□□□□□ -1.59
PTCD3-213ENST00000480102 FZD5Q13467 585 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 CAMK2GQ13555 558 aaPredicted RBP5.14□□□□□ -1.59
PTCD3-213ENST00000480102 RUNX3Q13761 415 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 LRRC32Q14392 662 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 PPP2R5DQ14738 602 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 DDR2Q16832 855 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 ITPRIPL2Q3MIP1 535 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 VWA3BQ502W6 1294 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 TCP11X2Q5H9J9 407 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 MIIPQ5JXC2 388 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 MPP7Q5T2T1 576 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 TCERG1LQ5VWI1 586 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 PPP1R2P3Q6NXS1 205 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 TRIM65Q6PJ69 517 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 BNC2Q6ZN30 1099 aaPredicted RBP5.14□□□□□ -1.59
PTCD3-213ENST00000480102 C22orf34Q6ZV56 151 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 TMEM110Q86TL2 294 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 ACOT1Q86TX2 421 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 RELL1Q8IUW5 271 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 FAM217AQ8IXS0 508 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 ADGRG2Q8IZP9 1017 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 CPA6Q8N4T0 437 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 ANKRD20A12PQ8NF67 263 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 GPT2Q8TD30 523 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 SLC2A14Q8TDB8 520 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 GATAD2BQ8WXI9 593 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 USP13Q92995 863 aaPredicted RBP5.14□□□□□ -1.59
PTCD3-213ENST00000480102 ATP2A3Q93084 1043 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 MCRS1Q96EZ8 462 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 SMOQ99835 787 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 RPP25Q9BUL9 199 aaKnown RBP5.14□□□□□ -1.59
PTCD3-213ENST00000480102 NAA15Q9BXJ9 866 aaKnown RBP5.14□□□□□ -1.59
PTCD3-213ENST00000480102 EDEM3Q9BZQ6 932 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 DCLK3Q9C098 648 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 MIS12Q9H081 205 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 DPEP3Q9H4B8 488 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 RETREG1Q9H6L5 497 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 PRMT8Q9NR22 394 aaPredicted RBP5.14□□□□□ -1.59
PTCD3-213ENST00000480102 TMEM30AQ9NV96 361 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.14□□□□□ -1.59
PTCD3-213ENST00000480102 HESX1Q9UBX0 185 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 TJP2Q9UDY2 1190 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 ADAM30Q9UKF2 790 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.14□□□□□ -1.59
PTCD3-213ENST00000480102 SIT1Q9Y3P8 196 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 SNX11Q9Y5W9 270 aa5.14□□□□□ -1.59
PTCD3-213ENST00000480102 DENND4AQ7Z401 1863 aa5.13□□□□□ -1.59
PTCD3-213ENST00000480102 MUC6Q6W4X9 2439 aa5.13□□□□□ -1.59
PTCD3-213ENST00000480102 A0A1W2PQC6 194 aa5.13□□□□□ -1.59
PTCD3-213ENST00000480102 IRAK2O43187 625 aa5.13□□□□□ -1.59
PTCD3-213ENST00000480102 COCHO43405 550 aa5.13□□□□□ -1.59
PTCD3-213ENST00000480102 FOXD2O60548 495 aaPredicted RBP5.13□□□□□ -1.59
PTCD3-213ENST00000480102 GREM1O60565 184 aa5.13□□□□□ -1.59
PTCD3-213ENST00000480102 TLR5O60602 858 aa5.13□□□□□ -1.59
PTCD3-213ENST00000480102 PRAMEF12O95522 483 aa5.13□□□□□ -1.59
PTCD3-213ENST00000480102 LSM8O95777 96 aaKnown RBP5.13□□□□□ -1.59
PTCD3-213ENST00000480102 BPNT1O95861 308 aa5.13□□□□□ -1.59
PTCD3-213ENST00000480102 ZBED1O96006 694 aa5.13□□□□□ -1.59
PTCD3-213ENST00000480102 CKMP06732 381 aa5.13□□□□□ -1.59
PTCD3-213ENST00000480102 TPM2P07951 284 aa5.13□□□□□ -1.59
PTCD3-213ENST00000480102 RALAP11233 206 aa5.13□□□□□ -1.59
PTCD3-213ENST00000480102 FUT4P22083 530 aa5.13□□□□□ -1.59
PTCD3-213ENST00000480102 PON1P27169 355 aa5.13□□□□□ -1.59
PTCD3-213ENST00000480102 CHKAP35790 457 aa5.13□□□□□ -1.59
PTCD3-213ENST00000480102 ATP5C1P36542 298 aaKnown RBP5.13□□□□□ -1.59
PTCD3-213ENST00000480102 CD96P40200 585 aa5.13□□□□□ -1.59
PTCD3-213ENST00000480102 GPD2P43304 727 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms