RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 CHRNGP07510 517 aa21.23■□□□□ 0.99
COL13A1-208ENST00000479733 MX2P20592 715 aa21.23■□□□□ 0.99
COL13A1-208ENST00000479733 CNTFP26441 200 aa21.23■□□□□ 0.99
COL13A1-208ENST00000479733 HARS2P49590 506 aaKnown RBP21.23■□□□□ 0.99
COL13A1-208ENST00000479733 RPL26P61254 145 aaKnown RBP21.23■□□□□ 0.99
COL13A1-208ENST00000479733 OLIG2Q13516 323 aa21.23■□□□□ 0.99
COL13A1-208ENST00000479733 NXNQ6DKJ4 435 aa21.23■□□□□ 0.99
COL13A1-208ENST00000479733 BNC2Q6ZN30 1099 aaPredicted RBP21.23■□□□□ 0.99
COL13A1-208ENST00000479733 TRIML2Q8N7C3 387 aa21.23■□□□□ 0.99
COL13A1-208ENST00000479733 C12orf29Q8N999 325 aa21.23■□□□□ 0.99
COL13A1-208ENST00000479733 ZNF512Q96ME7 567 aaPredicted RBP21.23■□□□□ 0.99
COL13A1-208ENST00000479733 CAB39LQ9H9S4 337 aa21.23■□□□□ 0.99
COL13A1-208ENST00000479733 CPSF3Q9UKF6 684 aaKnown RBP21.23■□□□□ 0.99
COL13A1-208ENST00000479733 AFG3L2Q9Y4W6 797 aa21.23■□□□□ 0.99
COL13A1-208ENST00000479733 UBR3Q6ZT12 1888 aa21.23■□□□□ 0.99
COL13A1-208ENST00000479733 LY75O60449 1722 aa21.23■□□□□ 0.99
COL13A1-208ENST00000479733 GJB1P08034 283 aa21.23■□□□□ 0.99
COL13A1-208ENST00000479733 PGGT1BP53609 377 aa21.23■□□□□ 0.99
COL13A1-208ENST00000479733 CEACAM7Q14002 265 aa21.23■□□□□ 0.99
COL13A1-208ENST00000479733 ACO2Q99798 780 aaKnown RBP21.23■□□□□ 0.99
COL13A1-208ENST00000479733 CDY2AQ9Y6F7 541 aa21.23■□□□□ 0.99
COL13A1-208ENST00000479733 CDY1Q9Y6F8 540 aa21.23■□□□□ 0.99
COL13A1-208ENST00000479733 B4GALT5O43286 388 aa21.22■□□□□ 0.99
COL13A1-208ENST00000479733 CSPG5O95196 566 aa21.22■□□□□ 0.99
COL13A1-208ENST00000479733 ITGB3P05106 788 aa21.22■□□□□ 0.99
COL13A1-208ENST00000479733 PRKCBP05771 671 aa21.22■□□□□ 0.99
COL13A1-208ENST00000479733 CCDC166P0CW27 439 aa21.22■□□□□ 0.99
COL13A1-208ENST00000479733 FGFR3P22607 806 aa21.22■□□□□ 0.99
COL13A1-208ENST00000479733 MAGEA6P43360 314 aa21.22■□□□□ 0.99
COL13A1-208ENST00000479733 EML3Q32P44 896 aa21.22■□□□□ 0.99
COL13A1-208ENST00000479733 HEATR6Q6AI08 1181 aaKnown RBP21.22■□□□□ 0.99
COL13A1-208ENST00000479733 CDKL3Q8IVW4 592 aaPredicted RBP21.22■□□□□ 0.99
COL13A1-208ENST00000479733 SCUBE3Q8IX30 993 aa21.22■□□□□ 0.99
COL13A1-208ENST00000479733 LPAR1Q92633 364 aa21.22■□□□□ 0.99
COL13A1-208ENST00000479733 TMA16Q96EY4 203 aaKnown RBP21.22■□□□□ 0.99
COL13A1-208ENST00000479733 FAM96AQ9H5X1 160 aa21.22■□□□□ 0.99
COL13A1-208ENST00000479733 TMEM134Q9H6X4 195 aa21.22■□□□□ 0.99
COL13A1-208ENST00000479733 ZNF696Q9H7X3 374 aa21.22■□□□□ 0.99
COL13A1-208ENST00000479733 SIX4Q9UIU6 781 aa21.22■□□□□ 0.99
COL13A1-208ENST00000479733 CDH2P19022 906 aaPredicted RBP21.22■□□□□ 0.99
COL13A1-208ENST00000479733 ACAT1P24752 427 aaKnown RBP21.22■□□□□ 0.99
COL13A1-208ENST00000479733 SERPINB8P50452 374 aa21.22■□□□□ 0.99
COL13A1-208ENST00000479733 EMP3P54852 163 aa21.22■□□□□ 0.99
COL13A1-208ENST00000479733 IRF9Q00978 393 aa21.22■□□□□ 0.99
COL13A1-208ENST00000479733 PPP2R5DQ14738 602 aa21.22■□□□□ 0.99
COL13A1-208ENST00000479733 PDK2Q15119 407 aa21.22■□□□□ 0.99
COL13A1-208ENST00000479733 MAP1SQ66K74 1059 aaPredicted RBP21.22■□□□□ 0.99
COL13A1-208ENST00000479733 ACMSDQ8TDX5 336 aa21.22■□□□□ 0.99
COL13A1-208ENST00000479733 LGMNQ99538 433 aa21.22■□□□□ 0.99
COL13A1-208ENST00000479733 CCT7Q99832 543 aa21.22■□□□□ 0.99
COL13A1-208ENST00000479733 SNX15Q9NRS6 342 aa21.22■□□□□ 0.99
COL13A1-208ENST00000479733 NFICP08651 508 aa21.22■□□□□ 0.99
COL13A1-208ENST00000479733 THRAP10827 490 aa21.22■□□□□ 0.99
COL13A1-208ENST00000479733 ALOX15P16050 662 aaPredicted RBP21.22■□□□□ 0.99
COL13A1-208ENST00000479733 PTPN1P18031 435 aaKnown RBP21.22■□□□□ 0.99
COL13A1-208ENST00000479733 MPSTP25325 297 aa21.22■□□□□ 0.99
COL13A1-208ENST00000479733 NIPAL4Q0D2K0 466 aa21.22■□□□□ 0.99
COL13A1-208ENST00000479733 BOLA3Q53S33 107 aa21.22■□□□□ 0.99
COL13A1-208ENST00000479733 STXBP5Q5T5C0 1151 aa21.22■□□□□ 0.99
COL13A1-208ENST00000479733 SLC9A4Q6AI14 798 aa21.22■□□□□ 0.99
COL13A1-208ENST00000479733 ZPBP2Q6X784 338 aa21.22■□□□□ 0.99
COL13A1-208ENST00000479733 ILDR2Q71H61 639 aa21.22■□□□□ 0.99
COL13A1-208ENST00000479733 RBM12BQ8IXT5 1001 aaKnown RBP21.22■□□□□ 0.99
COL13A1-208ENST00000479733 KBTBD7Q8WVZ9 684 aa21.22■□□□□ 0.99
COL13A1-208ENST00000479733 NUF2Q9BZD4 464 aa21.22■□□□□ 0.99
COL13A1-208ENST00000479733 SEPT10Q9P0V9 454 aa21.22■□□□□ 0.99
COL13A1-208ENST00000479733 HES2Q9Y543 173 aa21.22■□□□□ 0.99
COL13A1-208ENST00000479733 PCDHB12Q9Y5F1 795 aa21.22■□□□□ 0.99
COL13A1-208ENST00000479733 MAFBQ9Y5Q3 323 aaPredicted RBP21.22■□□□□ 0.99
COL13A1-208ENST00000479733 CEPT1Q9Y6K0 416 aa21.22■□□□□ 0.99
COL13A1-208ENST00000479733 LTFP02788 710 aa21.21■□□□□ 0.99
COL13A1-208ENST00000479733 NR1H2P55055 460 aa21.21■□□□□ 0.99
COL13A1-208ENST00000479733 LRRC8BQ6P9F7 803 aa21.21■□□□□ 0.99
COL13A1-208ENST00000479733 MIPOL1Q8TD10 442 aa21.21■□□□□ 0.99
COL13A1-208ENST00000479733 EME1Q96AY2 570 aa21.21■□□□□ 0.99
COL13A1-208ENST00000479733 KLHL32Q96NJ5 620 aa21.21■□□□□ 0.99
COL13A1-208ENST00000479733 CAAP1Q9H8G2 361 aa21.21■□□□□ 0.99
COL13A1-208ENST00000479733 GMEB1Q9Y692 573 aa21.21■□□□□ 0.99
COL13A1-208ENST00000479733 WDR81Q562E7 1941 aa21.21■□□□□ 0.99
COL13A1-208ENST00000479733 KIAA1217Q5T5P2 1943 aa21.21■□□□□ 0.99
COL13A1-208ENST00000479733 CYP3A5P20815 502 aa21.21■□□□□ 0.99
COL13A1-208ENST00000479733 SAT1P21673 171 aa21.21■□□□□ 0.99
COL13A1-208ENST00000479733 DPP6P42658 865 aa21.21■□□□□ 0.99
COL13A1-208ENST00000479733 ZNF423Q2M1K9 1284 aa21.21■□□□□ 0.99
COL13A1-208ENST00000479733 SH3D19Q5HYK7 790 aa21.21■□□□□ 0.99
COL13A1-208ENST00000479733 EEF1DP3Q658K8 133 aa21.21■□□□□ 0.99
COL13A1-208ENST00000479733 RSBN1LQ6PCB5 846 aaPredicted RBP21.21■□□□□ 0.99
COL13A1-208ENST00000479733 DCLK2Q8N568 766 aa21.21■□□□□ 0.99
COL13A1-208ENST00000479733 FERMT1Q9BQL6 677 aa21.21■□□□□ 0.99
COL13A1-208ENST00000479733 ZNF510Q9Y2H8 683 aa21.21■□□□□ 0.99
COL13A1-208ENST00000479733 KLHL35Q6PF15 583 aa21.2■□□□□ 0.98
COL13A1-208ENST00000479733 C16orf89Q6UX73 402 aa21.2■□□□□ 0.98
COL13A1-208ENST00000479733 C1orf127Q8N9H9 656 aa21.2■□□□□ 0.98
COL13A1-208ENST00000479733 RIN3Q8TB24 985 aa21.2■□□□□ 0.98
COL13A1-208ENST00000479733 NLRP7Q8WX94 980 aa21.2■□□□□ 0.98
COL13A1-208ENST00000479733 SLC4A5Q9BY07 1137 aa21.2■□□□□ 0.98
COL13A1-208ENST00000479733 B3GNT5Q9BYG0 378 aa21.2■□□□□ 0.98
COL13A1-208ENST00000479733 TIMMDC1Q9NPL8 285 aa21.2■□□□□ 0.98
COL13A1-208ENST00000479733 FAM49BQ9NUQ9 324 aa21.2■□□□□ 0.98
COL13A1-208ENST00000479733 SYBUQ9NX95 663 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms