RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 DEPDC1Q5TB30 811 aa6□□□□□ -1.45
UPF3A-205ENST00000479712 SP5Q6BEB4 398 aaPredicted RBP6□□□□□ -1.45
UPF3A-205ENST00000479712 ZNF585AQ6P3V2 769 aa6□□□□□ -1.45
UPF3A-205ENST00000479712 TMED8Q6PL24 325 aaPredicted RBP6□□□□□ -1.45
UPF3A-205ENST00000479712 C17orf99Q6UX52 265 aa6□□□□□ -1.45
UPF3A-205ENST00000479712 MOGAT3Q86VF5 341 aa6□□□□□ -1.45
UPF3A-205ENST00000479712 TEX19Q8NA77 164 aa6□□□□□ -1.45
UPF3A-205ENST00000479712 ATRIPQ8WXE1 791 aa6□□□□□ -1.45
UPF3A-205ENST00000479712 ZDHHC12Q96GR4 267 aa6□□□□□ -1.45
UPF3A-205ENST00000479712 ZBTB45Q96K62 511 aaPredicted RBP6□□□□□ -1.45
UPF3A-205ENST00000479712 HIST1H2AAQ96QV6 131 aa6□□□□□ -1.45
UPF3A-205ENST00000479712 KRTAP17-1Q9BYP8 105 aa6□□□□□ -1.45
UPF3A-205ENST00000479712 TPSD1Q9BZJ3 242 aa6□□□□□ -1.45
UPF3A-205ENST00000479712 PABPC3Q9H361 631 aaKnown RBP6□□□□□ -1.45
UPF3A-205ENST00000479712 PRDM8Q9NQV8 689 aa6□□□□□ -1.45
UPF3A-205ENST00000479712 INTS13Q9NVM9 706 aa6□□□□□ -1.45
UPF3A-205ENST00000479712 AURKAIP1Q9NWT8 199 aaPredicted RBP6□□□□□ -1.45
UPF3A-205ENST00000479712 KIF17Q9P2E2 1029 aa6□□□□□ -1.45
UPF3A-205ENST00000479712 LPAR3Q9UBY5 353 aa6□□□□□ -1.45
UPF3A-205ENST00000479712 ZNF69Q9UC07 566 aa6□□□□□ -1.45
UPF3A-205ENST00000479712 FLT4P35916 1363 aa6□□□□□ -1.45
UPF3A-205ENST00000479712 GVINP1Q7Z2Y8 2422 aa6□□□□□ -1.45
UPF3A-205ENST00000479712 ZFYVE26Q68DK2 2539 aa6□□□□□ -1.45
UPF3A-205ENST00000479712 ROCK2O75116 1388 aaKnown RBP5.99□□□□□ -1.45
UPF3A-205ENST00000479712 RRN3P2A6NIE6 340 aa5.99□□□□□ -1.45
UPF3A-205ENST00000479712 BTBD19C9JJ37 291 aa5.99□□□□□ -1.45
UPF3A-205ENST00000479712 J3KTA2 159 aa5.99□□□□□ -1.45
UPF3A-205ENST00000479712 ZSCAN9O15535 394 aaPredicted RBP5.99□□□□□ -1.45
UPF3A-205ENST00000479712 CDKL5O76039 1030 aa5.99□□□□□ -1.45
UPF3A-205ENST00000479712 ANXA6P08133 673 aa5.99□□□□□ -1.45
UPF3A-205ENST00000479712 CAPN2P17655 700 aa5.99□□□□□ -1.45
UPF3A-205ENST00000479712 GATA3P23771 443 aa5.99□□□□□ -1.45
UPF3A-205ENST00000479712 CST5P28325 142 aaPredicted RBP5.99□□□□□ -1.45
UPF3A-205ENST00000479712 RBL1P28749 1068 aa5.99□□□□□ -1.45
UPF3A-205ENST00000479712 EPHA3P29320 983 aa5.99□□□□□ -1.45
UPF3A-205ENST00000479712 AKT1P31749 480 aa5.99□□□□□ -1.45
UPF3A-205ENST00000479712 UQCRC1P31930 480 aa5.99□□□□□ -1.45
UPF3A-205ENST00000479712 SELENOPP49908 381 aa5.99□□□□□ -1.45
UPF3A-205ENST00000479712 GATMP50440 423 aa5.99□□□□□ -1.45
UPF3A-205ENST00000479712 PNLIPRP1P54315 467 aa5.99□□□□□ -1.45
UPF3A-205ENST00000479712 PRKD1Q15139 912 aaPredicted RBP5.99□□□□□ -1.45
UPF3A-205ENST00000479712 BEAN1Q3B7T3 259 aa5.99□□□□□ -1.45
UPF3A-205ENST00000479712 FBXO47Q5MNV8 452 aa5.99□□□□□ -1.45
UPF3A-205ENST00000479712 ATPAF1Q5TC12 328 aaPredicted RBP5.99□□□□□ -1.45
UPF3A-205ENST00000479712 ANKRD45Q5TZF3 282 aa5.99□□□□□ -1.45
UPF3A-205ENST00000479712 JAKMIP3Q5VZ66 844 aa5.99□□□□□ -1.45
UPF3A-205ENST00000479712 ARMC6Q6NXE6 501 aa5.99□□□□□ -1.45
UPF3A-205ENST00000479712 TMPRSS6Q8IU80 811 aa5.99□□□□□ -1.45
UPF3A-205ENST00000479712 SLC44A2Q8IWA5 706 aaPredicted RBP5.99□□□□□ -1.45
UPF3A-205ENST00000479712 NRSN1Q8IZ57 195 aa5.99□□□□□ -1.45
UPF3A-205ENST00000479712 ABRAQ8N0Z2 381 aa5.99□□□□□ -1.45
UPF3A-205ENST00000479712 CLASRPQ8N2M8 674 aaKnown RBP5.99□□□□□ -1.45
UPF3A-205ENST00000479712 CPEB3Q8NE35 698 aaKnown RBP5.99□□□□□ -1.45
UPF3A-205ENST00000479712 MBD3L2Q8NHZ7 208 aaPredicted RBP5.99□□□□□ -1.45
UPF3A-205ENST00000479712 OSCP1Q8WVF1 389 aa5.99□□□□□ -1.45
UPF3A-205ENST00000479712 ATG4AQ8WYN0 398 aa5.99□□□□□ -1.45
UPF3A-205ENST00000479712 LOXL4Q96JB6 756 aa5.99□□□□□ -1.45
UPF3A-205ENST00000479712 CRAMP1Q96RY5 1269 aa5.99□□□□□ -1.45
UPF3A-205ENST00000479712 EIF2AK1Q9BQI3 630 aaKnown RBP5.99□□□□□ -1.45
UPF3A-205ENST00000479712 ACTRT3Q9BYD9 372 aa5.99□□□□□ -1.45
UPF3A-205ENST00000479712 UNKLQ9H9P5 680 aaKnown RBP5.99□□□□□ -1.45
UPF3A-205ENST00000479712 PRDM16Q9HAZ2 1276 aa5.99□□□□□ -1.45
UPF3A-205ENST00000479712 ALG13Q9NP73 1137 aaKnown RBP5.99□□□□□ -1.45
UPF3A-205ENST00000479712 TMEM74BQ9NUR3 256 aa5.99□□□□□ -1.45
UPF3A-205ENST00000479712 ST6GALNAC2Q9UJ37 374 aa5.99□□□□□ -1.45
UPF3A-205ENST00000479712 SNX14Q9Y5W7 946 aa5.99□□□□□ -1.45
UPF3A-205ENST00000479712 PRRC2BQ5JSZ5 2229 aaKnown RBP5.99□□□□□ -1.45
UPF3A-205ENST00000479712 CACNA1HO95180 2353 aa5.99□□□□□ -1.45
UPF3A-205ENST00000479712 ABCC4O15439 1325 aa5.99□□□□□ -1.45
UPF3A-205ENST00000479712 KMT2EQ8IZD2 1858 aa5.98□□□□□ -1.45
UPF3A-205ENST00000479712 AGPSO00116 658 aa5.98□□□□□ -1.45
UPF3A-205ENST00000479712 NDUFA10O95299 355 aa5.98□□□□□ -1.45
UPF3A-205ENST00000479712 LMNAP02545 664 aaKnown RBP5.98□□□□□ -1.45
UPF3A-205ENST00000479712 PYGLP06737 847 aa5.98□□□□□ -1.45
UPF3A-205ENST00000479712 IL9P15248 144 aa5.98□□□□□ -1.45
UPF3A-205ENST00000479712 DDX6P26196 483 aaKnown RBP eCLIP5.98□□□□□ -1.45
UPF3A-205ENST00000479712 KLRK1P26718 216 aa5.98□□□□□ -1.45
UPF3A-205ENST00000479712 TIAL1Q01085 375 aaKnown RBP eCLIP5.98□□□□□ -1.45
UPF3A-205ENST00000479712 SCAPQ12770 1279 aa5.98□□□□□ -1.45
UPF3A-205ENST00000479712 KRTAP19-4Q3LI73 84 aa5.98□□□□□ -1.45
UPF3A-205ENST00000479712 LCE5AQ5TCM9 118 aa5.98□□□□□ -1.45
UPF3A-205ENST00000479712 RINT1Q6NUQ1 792 aa5.98□□□□□ -1.45
UPF3A-205ENST00000479712 TTC30AQ86WT1 665 aa5.98□□□□□ -1.45
UPF3A-205ENST00000479712 FTSJ3Q8IY81 847 aaKnown RBP5.98□□□□□ -1.45
UPF3A-205ENST00000479712 SCAMP5Q8TAC9 235 aa5.98□□□□□ -1.45
UPF3A-205ENST00000479712 SPPL3Q8TCT6 385 aa5.98□□□□□ -1.45
UPF3A-205ENST00000479712 HERVK_113Q902F9 699 aa5.98□□□□□ -1.45
UPF3A-205ENST00000479712 RSC1A1Q92681 617 aa5.98□□□□□ -1.45
UPF3A-205ENST00000479712 USP13Q92995 863 aaPredicted RBP5.98□□□□□ -1.45
UPF3A-205ENST00000479712 C17orf80Q9BSJ5 609 aa5.98□□□□□ -1.45
UPF3A-205ENST00000479712 DDX23Q9BUQ8 820 aaKnown RBP5.98□□□□□ -1.45
UPF3A-205ENST00000479712 INO80BQ9C086 356 aaPredicted RBP5.98□□□□□ -1.45
UPF3A-205ENST00000479712 AMBRA1Q9C0C7 1298 aa5.98□□□□□ -1.45
UPF3A-205ENST00000479712 SEPSECSQ9HD40 501 aaKnown RBP5.98□□□□□ -1.45
UPF3A-205ENST00000479712 PDP2Q9P2J9 529 aa5.98□□□□□ -1.45
UPF3A-205ENST00000479712 GJD2Q9UKL4 321 aa5.98□□□□□ -1.45
UPF3A-205ENST00000479712 USP22Q9UPT9 525 aa5.98□□□□□ -1.45
UPF3A-205ENST00000479712 DDX60Q8IY21 1712 aaKnown RBP5.97□□□□□ -1.45
UPF3A-205ENST00000479712 PNMA6EA0A0J9YXQ4 647 aa5.97□□□□□ -1.45
UPF3A-205ENST00000479712 PPM1DO15297 605 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms