RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 ZNF557Q8N988 423 aaPredicted RBP9.25□□□□□ -0.93
DDX56-211ENST00000479602 IL17RCQ8NAC3 791 aa9.25□□□□□ -0.93
DDX56-211ENST00000479602 CPA5Q8WXQ8 436 aa9.25□□□□□ -0.93
DDX56-211ENST00000479602 CTNNBL1Q8WYA6 563 aaPredicted RBP9.25□□□□□ -0.93
DDX56-211ENST00000479602 EXOC4Q96A65 974 aa9.25□□□□□ -0.93
DDX56-211ENST00000479602 ACDQ96AP0 544 aa9.25□□□□□ -0.93
DDX56-211ENST00000479602 PIWIL1Q96J94 861 aaKnown RBP9.25□□□□□ -0.93
DDX56-211ENST00000479602 TBCBQ99426 244 aa9.25□□□□□ -0.93
DDX56-211ENST00000479602 CHP1Q99653 195 aa9.25□□□□□ -0.93
DDX56-211ENST00000479602 C11orf70Q9BRQ4 267 aa9.25□□□□□ -0.93
DDX56-211ENST00000479602 CNPY3Q9BT09 278 aa9.25□□□□□ -0.93
DDX56-211ENST00000479602 TMEM121BQ9BXQ6 578 aaPredicted RBP9.25□□□□□ -0.93
DDX56-211ENST00000479602 SMOC1Q9H4F8 434 aa9.25□□□□□ -0.93
DDX56-211ENST00000479602 TRPC7Q9HCX4 862 aa9.25□□□□□ -0.93
DDX56-211ENST00000479602 KCND1Q9NSA2 647 aa9.25□□□□□ -0.93
DDX56-211ENST00000479602 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.25□□□□□ -0.93
DDX56-211ENST00000479602 MMP17Q9ULZ9 603 aa9.25□□□□□ -0.93
DDX56-211ENST00000479602 RHOBTB1O94844 696 aa9.24□□□□□ -0.93
DDX56-211ENST00000479602 NFATC1O95644 943 aa9.24□□□□□ -0.93
DDX56-211ENST00000479602 TRUB2O95900 331 aaKnown RBP9.24□□□□□ -0.93
DDX56-211ENST00000479602 CALCAP01258 141 aa9.24□□□□□ -0.93
DDX56-211ENST00000479602 LCP1P13796 627 aa9.24□□□□□ -0.93
DDX56-211ENST00000479602 RRM1P23921 792 aa9.24□□□□□ -0.93
DDX56-211ENST00000479602 GBP1P32455 592 aa9.24□□□□□ -0.93
DDX56-211ENST00000479602 FLT3P36888 993 aa9.24□□□□□ -0.93
DDX56-211ENST00000479602 P2RY2P41231 377 aa9.24□□□□□ -0.93
DDX56-211ENST00000479602 TNFRSF4P43489 277 aa9.24□□□□□ -0.93
DDX56-211ENST00000479602 PGFP49763 221 aa9.24□□□□□ -0.93
DDX56-211ENST00000479602 VAV2P52735 878 aa9.24□□□□□ -0.93
DDX56-211ENST00000479602 GALCP54803 685 aa9.24□□□□□ -0.93
DDX56-211ENST00000479602 CCZ1BP86790 482 aa9.24□□□□□ -0.93
DDX56-211ENST00000479602 CCZ1P86791 482 aaPredicted RBP9.24□□□□□ -0.93
DDX56-211ENST00000479602 GFPT1Q06210 699 aaPredicted RBP9.24□□□□□ -0.93
DDX56-211ENST00000479602 PIGHQ14442 188 aaPredicted RBP9.24□□□□□ -0.93
DDX56-211ENST00000479602 SPA17Q15506 151 aa9.24□□□□□ -0.93
DDX56-211ENST00000479602 MAP7D1Q3KQU3 841 aa9.24□□□□□ -0.93
DDX56-211ENST00000479602 HSF5Q4G112 596 aaPredicted RBP9.24□□□□□ -0.93
DDX56-211ENST00000479602 HS1BP3Q53T59 392 aa9.24□□□□□ -0.93
DDX56-211ENST00000479602 SPDYCQ5MJ68 293 aa9.24□□□□□ -0.93
DDX56-211ENST00000479602 CCDC122Q5T0U0 273 aa9.24□□□□□ -0.93
DDX56-211ENST00000479602 EMC10Q5UCC4 262 aa9.24□□□□□ -0.93
DDX56-211ENST00000479602 PEAR1Q5VY43 1037 aaPredicted RBP9.24□□□□□ -0.93
DDX56-211ENST00000479602 TCEAL6Q6IPX3 200 aa9.24□□□□□ -0.93
DDX56-211ENST00000479602 DNAJC24Q6P3W2 148 aa9.24□□□□□ -0.93
DDX56-211ENST00000479602 POLNQ7Z5Q5 900 aa9.24□□□□□ -0.93
DDX56-211ENST00000479602 C11orf74Q86VG3 221 aa9.24□□□□□ -0.93
DDX56-211ENST00000479602 C12orf40Q86WS4 652 aa9.24□□□□□ -0.93
DDX56-211ENST00000479602 MDGA1Q8NFP4 955 aa9.24□□□□□ -0.93
DDX56-211ENST00000479602 KCNV2Q8TDN2 545 aa9.24□□□□□ -0.93
DDX56-211ENST00000479602 CLEC4CQ8WTT0 213 aa9.24□□□□□ -0.93
DDX56-211ENST00000479602 RNF139Q8WU17 664 aa9.24□□□□□ -0.93
DDX56-211ENST00000479602 TCEAL3Q969E4 200 aa9.24□□□□□ -0.93
DDX56-211ENST00000479602 WBP2Q969T9 261 aa9.24□□□□□ -0.93
DDX56-211ENST00000479602 FAM149B1Q96BN6 582 aa9.24□□□□□ -0.93
DDX56-211ENST00000479602 C1orf74Q96LT6 269 aa9.24□□□□□ -0.93
DDX56-211ENST00000479602 CCSER2Q9H7U1 834 aa9.24□□□□□ -0.93
DDX56-211ENST00000479602 ARHGEF38Q9NXL2 777 aa9.24□□□□□ -0.93
DDX56-211ENST00000479602 TAS2R14Q9NYV8 317 aa9.24□□□□□ -0.93
DDX56-211ENST00000479602 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.24□□□□□ -0.93
DDX56-211ENST00000479602 MARCH2Q9P0N8 246 aa9.24□□□□□ -0.93
DDX56-211ENST00000479602 TJP2Q9UDY2 1190 aa9.24□□□□□ -0.93
DDX56-211ENST00000479602 STARD13Q9Y3M8 1113 aa9.24□□□□□ -0.93
DDX56-211ENST00000479602 CPQQ9Y646 472 aa9.24□□□□□ -0.93
DDX56-211ENST00000479602 FREM2Q5SZK8 3169 aa9.24□□□□□ -0.93
DDX56-211ENST00000479602 LNP1A1A4G5 178 aa9.23□□□□□ -0.93
DDX56-211ENST00000479602 KCNU1A8MYU2 1149 aa9.23□□□□□ -0.93
DDX56-211ENST00000479602 SGK1O00141 431 aa9.23□□□□□ -0.93
DDX56-211ENST00000479602 HOXC11O43248 304 aaPredicted RBP9.23□□□□□ -0.93
DDX56-211ENST00000479602 STC2O76061 302 aa9.23□□□□□ -0.93
DDX56-211ENST00000479602 KAT7O95251 611 aa9.23□□□□□ -0.93
DDX56-211ENST00000479602 NCAM1P13591 858 aa9.23□□□□□ -0.93
DDX56-211ENST00000479602 BCKDHBP21953 392 aa9.23□□□□□ -0.93
DDX56-211ENST00000479602 SDC4P31431 198 aa9.23□□□□□ -0.93
DDX56-211ENST00000479602 CCR1P32246 355 aa9.23□□□□□ -0.93
DDX56-211ENST00000479602 RDXP35241 583 aaKnown RBP9.23□□□□□ -0.93
DDX56-211ENST00000479602 RFC1P35251 1148 aaPredicted RBP9.23□□□□□ -0.93
DDX56-211ENST00000479602 CHKAP35790 457 aa9.23□□□□□ -0.93
DDX56-211ENST00000479602 GRIA2P42262 883 aa9.23□□□□□ -0.93
DDX56-211ENST00000479602 DGKEP52429 567 aa9.23□□□□□ -0.93
DDX56-211ENST00000479602 AASDHQ4L235 1098 aaPredicted RBP9.23□□□□□ -0.93
DDX56-211ENST00000479602 USP39Q53GS9 565 aaKnown RBP9.23□□□□□ -0.93
DDX56-211ENST00000479602 C2orf27AQ580R0 203 aa9.23□□□□□ -0.93
DDX56-211ENST00000479602 C10orf120Q5SQS8 335 aa9.23□□□□□ -0.93
DDX56-211ENST00000479602 LRRC38Q5VT99 294 aa9.23□□□□□ -0.93
DDX56-211ENST00000479602 TTC39BQ5VTQ0 682 aaPredicted RBP9.23□□□□□ -0.93
DDX56-211ENST00000479602 IL31Q6EBC2 164 aa9.23□□□□□ -0.93
DDX56-211ENST00000479602 OR6B2Q6IFH4 312 aa9.23□□□□□ -0.93
DDX56-211ENST00000479602 RAD9BQ6WBX8 426 aa9.23□□□□□ -0.93
DDX56-211ENST00000479602 TAC4Q86UU9 113 aa9.23□□□□□ -0.93
DDX56-211ENST00000479602 DEFB106AQ8N104 65 aa9.23□□□□□ -0.93
DDX56-211ENST00000479602 RNF10Q8N5U6 811 aaKnown RBP9.23□□□□□ -0.93
DDX56-211ENST00000479602 TSTD1Q8NFU3 115 aa9.23□□□□□ -0.93
DDX56-211ENST00000479602 FAM71BQ8TC56 605 aa9.23□□□□□ -0.93
DDX56-211ENST00000479602 ZNF653Q96CK0 615 aa9.23□□□□□ -0.93
DDX56-211ENST00000479602 P2RY11Q96G91 374 aa9.23□□□□□ -0.93
DDX56-211ENST00000479602 BTN2A3PQ96KV6 586 aa9.23□□□□□ -0.93
DDX56-211ENST00000479602 FCRL2Q96LA5 508 aaPredicted RBP9.23□□□□□ -0.93
DDX56-211ENST00000479602 HAPLN3Q96S86 360 aa9.23□□□□□ -0.93
DDX56-211ENST00000479602 PNKPQ96T60 521 aa9.23□□□□□ -0.93
DDX56-211ENST00000479602 SELENOOQ9BVL4 669 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms