RNA–Protein interactions for RNA: ENST00000479591.1

TM9SF4-206, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-206ENST00000479591 PCDH9Q9HC56 1237 aa12.32□□□□□ -0.44
TM9SF4-206ENST00000479591 DNMT3BQ9UBC3 853 aaKnown RBP12.32□□□□□ -0.44
TM9SF4-206ENST00000479591 ASIC3Q9UHC3 531 aa12.32□□□□□ -0.44
TM9SF4-206ENST00000479591 LSM7Q9UK45 103 aaKnown RBP12.32□□□□□ -0.44
TM9SF4-206ENST00000479591 VANGL2Q9ULK5 521 aa12.32□□□□□ -0.44
TM9SF4-206ENST00000479591 NEU2Q9Y3R4 380 aa12.32□□□□□ -0.44
TM9SF4-206ENST00000479591 CCDC195A0A1B0GUA6 201 aa12.31□□□□□ -0.44
TM9SF4-206ENST00000479591 ESYT3A0FGR9 886 aa12.31□□□□□ -0.44
TM9SF4-206ENST00000479591 ZSCAN5CA6NGD5 496 aaPredicted RBP12.31□□□□□ -0.44
TM9SF4-206ENST00000479591 DRGXA6NNA5 263 aa12.31□□□□□ -0.44
TM9SF4-206ENST00000479591 RHOQP17081 205 aa12.31□□□□□ -0.44
TM9SF4-206ENST00000479591 TACR2P21452 398 aa12.31□□□□□ -0.44
TM9SF4-206ENST00000479591 CORO1AP31146 461 aaKnown RBP12.31□□□□□ -0.44
TM9SF4-206ENST00000479591 ZNF33AQ06730 810 aa12.31□□□□□ -0.44
TM9SF4-206ENST00000479591 SLC10A2Q12908 348 aaPredicted RBP12.31□□□□□ -0.44
TM9SF4-206ENST00000479591 KCNC3Q14003 757 aa12.31□□□□□ -0.44
TM9SF4-206ENST00000479591 ARTNQ5T4W7 220 aa12.31□□□□□ -0.44
TM9SF4-206ENST00000479591 C4orf22Q6V702 233 aa12.31□□□□□ -0.44
TM9SF4-206ENST00000479591 C14orf80Q86SX3 495 aa12.31□□□□□ -0.44
TM9SF4-206ENST00000479591 CHSY1Q86X52 802 aa12.31□□□□□ -0.44
TM9SF4-206ENST00000479591 DDX42Q86XP3 938 aaKnown RBP eCLIP12.31□□□□□ -0.44
TM9SF4-206ENST00000479591 DENND1CQ8IV53 801 aa12.31□□□□□ -0.44
TM9SF4-206ENST00000479591 RTL3Q8N8U3 475 aaKnown RBP12.31□□□□□ -0.44
TM9SF4-206ENST00000479591 MAB21L3Q8N8X9 362 aa12.31□□□□□ -0.44
TM9SF4-206ENST00000479591 SHKBP1Q8TBC3 707 aa12.31□□□□□ -0.44
TM9SF4-206ENST00000479591 TFB1MQ8WVM0 346 aaKnown RBP12.31□□□□□ -0.44
TM9SF4-206ENST00000479591 IFT81Q8WYA0 676 aa12.31□□□□□ -0.44
TM9SF4-206ENST00000479591 ZNF707Q96C28 371 aaPredicted RBP12.31□□□□□ -0.44
TM9SF4-206ENST00000479591 RTP4Q96DX8 246 aa12.31□□□□□ -0.44
TM9SF4-206ENST00000479591 SNF8Q96H20 258 aa12.31□□□□□ -0.44
TM9SF4-206ENST00000479591 ZFRQ96KR1 1074 aaKnown RBP12.31□□□□□ -0.44
TM9SF4-206ENST00000479591 SLC22A12Q96S37 553 aa12.31□□□□□ -0.44
TM9SF4-206ENST00000479591 DPH5Q9H2P9 285 aa12.31□□□□□ -0.44
TM9SF4-206ENST00000479591 NSUN3Q9H649 340 aaKnown RBP12.31□□□□□ -0.44
TM9SF4-206ENST00000479591 TASP1Q9H6P5 420 aa12.31□□□□□ -0.44
TM9SF4-206ENST00000479591 GKN1Q9NS71 199 aa12.31□□□□□ -0.44
TM9SF4-206ENST00000479591 HCFC1R1Q9NWW0 138 aa12.31□□□□□ -0.44
TM9SF4-206ENST00000479591 WHRNQ9P202 907 aa12.31□□□□□ -0.44
TM9SF4-206ENST00000479591 STOML2Q9UJZ1 356 aa12.31□□□□□ -0.44
TM9SF4-206ENST00000479591 ZNF510Q9Y2H8 683 aa12.31□□□□□ -0.44
TM9SF4-206ENST00000479591 MFHAS1Q9Y4C4 1052 aa12.31□□□□□ -0.44
TM9SF4-206ENST00000479591 CPQQ9Y646 472 aa12.31□□□□□ -0.44
TM9SF4-206ENST00000479591 A0A1W2PPC1 479 aa12.3□□□□□ -0.44
TM9SF4-206ENST00000479591 MOSPD3O75425 235 aa12.3□□□□□ -0.44
TM9SF4-206ENST00000479591 IRF1P10914 325 aa12.3□□□□□ -0.44
TM9SF4-206ENST00000479591 ITIH2P19823 946 aa12.3□□□□□ -0.44
TM9SF4-206ENST00000479591 ACTN2P35609 894 aa12.3□□□□□ -0.44
TM9SF4-206ENST00000479591 ADCY8P40145 1251 aa12.3□□□□□ -0.44
TM9SF4-206ENST00000479591 CCR2P41597 374 aa12.3□□□□□ -0.44
TM9SF4-206ENST00000479591 RPL21P46778 160 aaKnown RBP12.3□□□□□ -0.44
TM9SF4-206ENST00000479591 MAPKAPK2P49137 400 aa12.3□□□□□ -0.44
TM9SF4-206ENST00000479591 CARSP49589 748 aaKnown RBP12.3□□□□□ -0.44
TM9SF4-206ENST00000479591 CAV1Q03135 178 aa12.3□□□□□ -0.44
TM9SF4-206ENST00000479591 GALNT2Q10471 571 aa12.3□□□□□ -0.44
TM9SF4-206ENST00000479591 CALCOCO2Q13137 446 aa12.3□□□□□ -0.44
TM9SF4-206ENST00000479591 HLTFQ14527 1009 aaKnown RBP eCLIP12.3□□□□□ -0.44
TM9SF4-206ENST00000479591 PRKD1Q15139 912 aaPredicted RBP12.3□□□□□ -0.44
TM9SF4-206ENST00000479591 P3H1Q32P28 736 aa12.3□□□□□ -0.44
TM9SF4-206ENST00000479591 FAM133BQ5BKY9 247 aaKnown RBP12.3□□□□□ -0.44
TM9SF4-206ENST00000479591 PRSS36Q5K4E3 855 aa12.3□□□□□ -0.44
TM9SF4-206ENST00000479591 RABGAP1LQ5R372 815 aa12.3□□□□□ -0.44
TM9SF4-206ENST00000479591 ADGRF1Q5T601 910 aa12.3□□□□□ -0.44
TM9SF4-206ENST00000479591 GPR158Q5T848 1215 aa12.3□□□□□ -0.44
TM9SF4-206ENST00000479591 TTC39BQ5VTQ0 682 aaPredicted RBP12.3□□□□□ -0.44
TM9SF4-206ENST00000479591 HEATR6Q6AI08 1181 aaKnown RBP12.3□□□□□ -0.44
TM9SF4-206ENST00000479591 NADSYN1Q6IA69 706 aa12.3□□□□□ -0.44
TM9SF4-206ENST00000479591 FBXL22Q6P050 247 aa12.3□□□□□ -0.44
TM9SF4-206ENST00000479591 FBXO38Q6PIJ6 1188 aa12.3□□□□□ -0.44
TM9SF4-206ENST00000479591 CHRDL2Q6WN34 429 aa12.3□□□□□ -0.44
TM9SF4-206ENST00000479591 TMEM184AQ6ZMB5 413 aa12.3□□□□□ -0.44
TM9SF4-206ENST00000479591 NLRP14Q86W24 1093 aa12.3□□□□□ -0.44
TM9SF4-206ENST00000479591 LRRC49Q8IUZ0 686 aa12.3□□□□□ -0.44
TM9SF4-206ENST00000479591 LRRC45Q96CN5 670 aa12.3□□□□□ -0.44
TM9SF4-206ENST00000479591 HDAC11Q96DB2 347 aa12.3□□□□□ -0.44
TM9SF4-206ENST00000479591 RPRD1AQ96P16 312 aaPredicted RBP12.3□□□□□ -0.44
TM9SF4-206ENST00000479591 CYP2S1Q96SQ9 504 aa12.3□□□□□ -0.44
TM9SF4-206ENST00000479591 HINFPQ9BQA5 517 aa12.3□□□□□ -0.44
TM9SF4-206ENST00000479591 SLC46A2Q9BY10 475 aa12.3□□□□□ -0.44
TM9SF4-206ENST00000479591 TRIM31Q9BZY9 425 aa12.3□□□□□ -0.44
TM9SF4-206ENST00000479591 PIDD1Q9HB75 910 aa12.3□□□□□ -0.44
TM9SF4-206ENST00000479591 USP29Q9HBJ7 922 aa12.3□□□□□ -0.44
TM9SF4-206ENST00000479591 ARFGAP3Q9NP61 516 aa12.3□□□□□ -0.44
TM9SF4-206ENST00000479591 TMEM248Q9NWD8 314 aa12.3□□□□□ -0.44
TM9SF4-206ENST00000479591 SMPD4Q9NXE4 827 aa12.3□□□□□ -0.44
TM9SF4-206ENST00000479591 LMCD1Q9NZU5 365 aa12.3□□□□□ -0.44
TM9SF4-206ENST00000479591 AGO1Q9UL18 857 aaKnown RBP12.3□□□□□ -0.44
TM9SF4-206ENST00000479591 ARHGAP26Q9UNA1 814 aa12.3□□□□□ -0.44
TM9SF4-206ENST00000479591 SNX24Q9Y343 169 aa12.3□□□□□ -0.44
TM9SF4-206ENST00000479591 HELZP42694 1942 aaKnown RBP12.3□□□□□ -0.44
TM9SF4-206ENST00000479591 DOCK4Q8N1I0 1966 aa12.3□□□□□ -0.44
TM9SF4-206ENST00000479591 RFXAPO00287 272 aa12.29□□□□□ -0.44
TM9SF4-206ENST00000479591 KCNN4O15554 427 aa12.29□□□□□ -0.44
TM9SF4-206ENST00000479591 MTSS1O43312 755 aa12.29□□□□□ -0.44
TM9SF4-206ENST00000479591 STK10O94804 968 aaKnown RBP12.29□□□□□ -0.44
TM9SF4-206ENST00000479591 MAP3K6O95382 1288 aa12.29□□□□□ -0.44
TM9SF4-206ENST00000479591 IFNB1P01574 187 aa12.29□□□□□ -0.44
TM9SF4-206ENST00000479591 KLKB1P03952 638 aa12.29□□□□□ -0.44
TM9SF4-206ENST00000479591 GJA1P17302 382 aa12.29□□□□□ -0.44
TM9SF4-206ENST00000479591 RBL1P28749 1068 aa12.29□□□□□ -0.44
TM9SF4-206ENST00000479591 AVPR1AP37288 418 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms