RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 LRRC40Q9H9A6 602 aa25.26■■□□□ 1.63
SYNGAP1-206ENST00000479510 KRT82Q9NSB4 513 aa25.26■■□□□ 1.63
SYNGAP1-206ENST00000479510 NCAM2O15394 837 aa25.25■■□□□ 1.63
SYNGAP1-206ENST00000479510 DDNO94850 711 aaPredicted RBP25.25■■□□□ 1.63
SYNGAP1-206ENST00000479510 PRKCGP05129 697 aa25.25■■□□□ 1.63
SYNGAP1-206ENST00000479510 DARSP14868 501 aaKnown RBP25.25■■□□□ 1.63
SYNGAP1-206ENST00000479510 TYK2P29597 1187 aa25.25■■□□□ 1.63
SYNGAP1-206ENST00000479510 IRX4P78413 519 aa25.25■■□□□ 1.63
SYNGAP1-206ENST00000479510 CRADDP78560 199 aa25.25■■□□□ 1.63
SYNGAP1-206ENST00000479510 UBAP2LQ14157 1087 aaKnown RBP25.25■■□□□ 1.63
SYNGAP1-206ENST00000479510 GLRA4Q5JXX5 417 aa25.25■■□□□ 1.63
SYNGAP1-206ENST00000479510 OTUD1Q5VV17 481 aaPredicted RBP25.25■■□□□ 1.63
SYNGAP1-206ENST00000479510 C1orf146Q5VVC0 180 aa25.25■■□□□ 1.63
SYNGAP1-206ENST00000479510 TMEM154Q6P9G4 183 aa25.25■■□□□ 1.63
SYNGAP1-206ENST00000479510 ZNF567Q8N184 647 aa25.25■■□□□ 1.63
SYNGAP1-206ENST00000479510 OR6Y1Q8NGX8 325 aa25.25■■□□□ 1.63
SYNGAP1-206ENST00000479510 PGBD4Q96DM1 585 aa25.25■■□□□ 1.63
SYNGAP1-206ENST00000479510 SLC2A13Q96QE2 648 aa25.25■■□□□ 1.63
SYNGAP1-206ENST00000479510 BRD8Q9H0E9 1235 aa25.25■■□□□ 1.63
SYNGAP1-206ENST00000479510 SCOCQ9UIL1 159 aa25.25■■□□□ 1.63
SYNGAP1-206ENST00000479510 SMIM28A0A1B0GU29 152 aa25.25■■□□□ 1.63
SYNGAP1-206ENST00000479510 ERI2A8K979 691 aaKnown RBP25.25■■□□□ 1.63
SYNGAP1-206ENST00000479510 HCRTO43612 131 aa25.25■■□□□ 1.63
SYNGAP1-206ENST00000479510 SNAI1O95863 264 aaPredicted RBP25.25■■□□□ 1.63
SYNGAP1-206ENST00000479510 ABCE1P61221 599 aaKnown RBP25.25■■□□□ 1.63
SYNGAP1-206ENST00000479510 HIC1Q14526 733 aa25.25■■□□□ 1.63
SYNGAP1-206ENST00000479510 MDH1BQ5I0G3 518 aa25.25■■□□□ 1.63
SYNGAP1-206ENST00000479510 FAM149B1Q96BN6 582 aa25.25■■□□□ 1.63
SYNGAP1-206ENST00000479510 NR1H4Q96RI1 486 aaPredicted RBP25.25■■□□□ 1.63
SYNGAP1-206ENST00000479510 SORT1Q99523 831 aa25.25■■□□□ 1.63
SYNGAP1-206ENST00000479510 PRDM12Q9H4Q4 367 aa25.25■■□□□ 1.63
SYNGAP1-206ENST00000479510 PDCD11Q14690 1871 aaKnown RBP25.25■■□□□ 1.63
SYNGAP1-206ENST00000479510 SMIM35A0A1B0GVV1 85 aa25.24■■□□□ 1.63
SYNGAP1-206ENST00000479510 SPTLC1O15269 473 aa25.24■■□□□ 1.63
SYNGAP1-206ENST00000479510 HUS1O60921 280 aa25.24■■□□□ 1.63
SYNGAP1-206ENST00000479510 SKAP2O75563 359 aaPredicted RBP25.24■■□□□ 1.63
SYNGAP1-206ENST00000479510 KCNA4P22459 653 aa25.24■■□□□ 1.63
SYNGAP1-206ENST00000479510 PRDX6P30041 224 aa25.24■■□□□ 1.63
SYNGAP1-206ENST00000479510 SPRP35270 261 aaPredicted RBP25.24■■□□□ 1.63
SYNGAP1-206ENST00000479510 SERPINB8P50452 374 aa25.24■■□□□ 1.63
SYNGAP1-206ENST00000479510 ADIGQ0VDE8 80 aa25.24■■□□□ 1.63
SYNGAP1-206ENST00000479510 DCAF6Q58WW2 860 aa25.24■■□□□ 1.63
SYNGAP1-206ENST00000479510 RFX8Q6ZV50 586 aa25.24■■□□□ 1.63
SYNGAP1-206ENST00000479510 MOB2Q70IA6 237 aa25.24■■□□□ 1.63
SYNGAP1-206ENST00000479510 C10orf107Q8IVU9 208 aa25.24■■□□□ 1.63
SYNGAP1-206ENST00000479510 B3GALNT2Q8NCR0 500 aa25.24■■□□□ 1.63
SYNGAP1-206ENST00000479510 NTAN1Q96AB6 310 aa25.24■■□□□ 1.63
SYNGAP1-206ENST00000479510 NXF3Q9H4D5 531 aaKnown RBP25.24■■□□□ 1.63
SYNGAP1-206ENST00000479510 NDE1Q9NXR1 346 aa25.24■■□□□ 1.63
SYNGAP1-206ENST00000479510 PSAT1Q9Y617 370 aa25.24■■□□□ 1.63
SYNGAP1-206ENST00000479510 RPS6KL1Q9Y6S9 549 aa25.24■■□□□ 1.63
SYNGAP1-206ENST00000479510 WASF2Q9Y6W5 498 aa25.24■■□□□ 1.63
SYNGAP1-206ENST00000479510 A0A088AWK7 358 aa25.24■■□□□ 1.63
SYNGAP1-206ENST00000479510 DCLK1O15075 740 aa25.24■■□□□ 1.63
SYNGAP1-206ENST00000479510 MTSS1O43312 755 aa25.24■■□□□ 1.63
SYNGAP1-206ENST00000479510 CCNT2O60583 730 aaKnown RBP25.24■■□□□ 1.63
SYNGAP1-206ENST00000479510 SIN3BO75182 1162 aa25.24■■□□□ 1.63
SYNGAP1-206ENST00000479510 LYPLA1O75608 230 aaPredicted RBP25.24■■□□□ 1.63
SYNGAP1-206ENST00000479510 RALBP11234 206 aa25.24■■□□□ 1.63
SYNGAP1-206ENST00000479510 HCAR3P49019 387 aa25.24■■□□□ 1.63
SYNGAP1-206ENST00000479510 IDH3AP50213 366 aa25.24■■□□□ 1.63
SYNGAP1-206ENST00000479510 COPAP53621 1224 aa25.24■■□□□ 1.63
SYNGAP1-206ENST00000479510 DEUP1Q05D60 604 aa25.24■■□□□ 1.63
SYNGAP1-206ENST00000479510 CCNYQ8ND76 341 aa25.24■■□□□ 1.63
SYNGAP1-206ENST00000479510 WNT8BQ93098 351 aa25.24■■□□□ 1.63
SYNGAP1-206ENST00000479510 CMTM5Q96DZ9 223 aa25.24■■□□□ 1.63
SYNGAP1-206ENST00000479510 RBBP8Q99708 897 aa25.24■■□□□ 1.63
SYNGAP1-206ENST00000479510 SETD4Q9NVD3 440 aa25.24■■□□□ 1.63
SYNGAP1-206ENST00000479510 GJD2Q9UKL4 321 aa25.24■■□□□ 1.63
SYNGAP1-206ENST00000479510 HES2Q9Y543 173 aa25.24■■□□□ 1.63
SYNGAP1-206ENST00000479510 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.23■■□□□ 1.63
SYNGAP1-206ENST00000479510 MAGEA13PA6NCF6 341 aa25.23■■□□□ 1.63
SYNGAP1-206ENST00000479510 H2AFYO75367 372 aaKnown RBP25.23■■□□□ 1.63
SYNGAP1-206ENST00000479510 AP2A1O95782 977 aa25.23■■□□□ 1.63
SYNGAP1-206ENST00000479510 MPOP05164 745 aa25.23■■□□□ 1.63
SYNGAP1-206ENST00000479510 C6orf222P0C671 652 aaPredicted RBP25.23■■□□□ 1.63
SYNGAP1-206ENST00000479510 CPA3P15088 417 aa25.23■■□□□ 1.63
SYNGAP1-206ENST00000479510 IRX1P78414 480 aaPredicted RBP25.23■■□□□ 1.63
SYNGAP1-206ENST00000479510 SCAPQ12770 1279 aa25.23■■□□□ 1.63
SYNGAP1-206ENST00000479510 INTS6LQ5JSJ4 861 aaKnown RBP25.23■■□□□ 1.63
SYNGAP1-206ENST00000479510 OR6J1Q8NGC5 347 aa25.23■■□□□ 1.63
SYNGAP1-206ENST00000479510 SREK1Q8WXA9 508 aaKnown RBP25.23■■□□□ 1.63
SYNGAP1-206ENST00000479510 SLC17A6Q9P2U8 582 aa25.23■■□□□ 1.63
SYNGAP1-206ENST00000479510 CDY2AQ9Y6F7 541 aa25.23■■□□□ 1.63
SYNGAP1-206ENST00000479510 CDY1Q9Y6F8 540 aa25.23■■□□□ 1.63
SYNGAP1-206ENST00000479510 NRCAMQ92823 1304 aa25.22■■□□□ 1.63
SYNGAP1-206ENST00000479510 EEF2KO00418 725 aaKnown RBP25.22■■□□□ 1.63
SYNGAP1-206ENST00000479510 NPR3P17342 541 aa25.22■■□□□ 1.63
SYNGAP1-206ENST00000479510 SMPD1P17405 629 aa25.22■■□□□ 1.63
SYNGAP1-206ENST00000479510 SP100P23497 879 aaPredicted RBP25.22■■□□□ 1.63
SYNGAP1-206ENST00000479510 LIMK2P53671 638 aa25.22■■□□□ 1.63
SYNGAP1-206ENST00000479510 TMEM135Q86UB9 458 aa25.22■■□□□ 1.63
SYNGAP1-206ENST00000479510 SYT15Q9BQS2 421 aa25.22■■□□□ 1.63
SYNGAP1-206ENST00000479510 BFARQ9NZS9 450 aa25.22■■□□□ 1.63
SYNGAP1-206ENST00000479510 TMEM216Q9P0N5 145 aa25.22■■□□□ 1.63
SYNGAP1-206ENST00000479510 PCDHB12Q9Y5F1 795 aa25.22■■□□□ 1.63
SYNGAP1-206ENST00000479510 NR2E3Q9Y5X4 410 aa25.22■■□□□ 1.63
SYNGAP1-206ENST00000479510 MAGEB16A2A368 324 aa25.22■■□□□ 1.63
SYNGAP1-206ENST00000479510 TMEM114B3SHH9 223 aa25.22■■□□□ 1.63
SYNGAP1-206ENST00000479510 ZNF195O14628 629 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms