RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 ARGLU1Q9NWB6 273 aaPredicted RBP6.95□□□□□ -1.3
VCP-205ENST00000479300 HMGXB4Q9UGU5 601 aa6.95□□□□□ -1.3
VCP-205ENST00000479300 ARMCX3Q9UH62 379 aaPredicted RBP6.95□□□□□ -1.3
VCP-205ENST00000479300 DNMT3LQ9UJW3 386 aa6.95□□□□□ -1.3
VCP-205ENST00000479300 NAGPAQ9UK23 515 aa6.95□□□□□ -1.3
VCP-205ENST00000479300 CLEC4EQ9ULY5 219 aa6.95□□□□□ -1.3
VCP-205ENST00000479300 SCML2Q9UQR0 700 aa6.95□□□□□ -1.3
VCP-205ENST00000479300 ZNF510Q9Y2H8 683 aa6.95□□□□□ -1.3
VCP-205ENST00000479300 PCDHGB2Q9Y5G2 931 aa6.95□□□□□ -1.3
VCP-205ENST00000479300 SNX11Q9Y5W9 270 aa6.95□□□□□ -1.3
VCP-205ENST00000479300 EIF4E1BA6NMX2 242 aaKnown RBP6.94□□□□□ -1.3
VCP-205ENST00000479300 HHLA1C9JL84 531 aa6.94□□□□□ -1.3
VCP-205ENST00000479300 H0Y8X5 98 aa6.94□□□□□ -1.3
VCP-205ENST00000479300 MYO1CO00159 1063 aa6.94□□□□□ -1.3
VCP-205ENST00000479300 CBX4O00257 560 aa6.94□□□□□ -1.3
VCP-205ENST00000479300 PLK4O00444 970 aa6.94□□□□□ -1.3
VCP-205ENST00000479300 FLRT2O43155 660 aa6.94□□□□□ -1.3
VCP-205ENST00000479300 CYP26A1O43174 497 aa6.94□□□□□ -1.3
VCP-205ENST00000479300 CER1O95813 267 aa6.94□□□□□ -1.3
VCP-205ENST00000479300 PENKP01210 267 aaPredicted RBP6.94□□□□□ -1.3
VCP-205ENST00000479300 CYBBP04839 570 aa6.94□□□□□ -1.3
VCP-205ENST00000479300 TPM1P09493 284 aa6.94□□□□□ -1.3
VCP-205ENST00000479300 CD19P15391 556 aa6.94□□□□□ -1.3
VCP-205ENST00000479300 TBXAS1P24557 533 aaPredicted RBP6.94□□□□□ -1.3
VCP-205ENST00000479300 ABCG1P45844 678 aa6.94□□□□□ -1.3
VCP-205ENST00000479300 DGKGP49619 791 aa6.94□□□□□ -1.3
VCP-205ENST00000479300 ZNF75DP51815 510 aa6.94□□□□□ -1.3
VCP-205ENST00000479300 MFAP3P55082 362 aa6.94□□□□□ -1.3
VCP-205ENST00000479300 COG7P83436 770 aa6.94□□□□□ -1.3
VCP-205ENST00000479300 C19orf57Q0VDD7 668 aa6.94□□□□□ -1.3
VCP-205ENST00000479300 COBLL1Q53SF7 1204 aa6.94□□□□□ -1.3
VCP-205ENST00000479300 SGO2Q562F6 1265 aa6.94□□□□□ -1.3
VCP-205ENST00000479300 C1orf220Q5T0J3 134 aa6.94□□□□□ -1.3
VCP-205ENST00000479300 FYB2Q5VWT5 728 aa6.94□□□□□ -1.3
VCP-205ENST00000479300 ANKRD40Q6AI12 368 aa6.94□□□□□ -1.3
VCP-205ENST00000479300 CLEC20AQ6ZU45 233 aa6.94□□□□□ -1.3
VCP-205ENST00000479300 TMPRSS6Q8IU80 811 aa6.94□□□□□ -1.3
VCP-205ENST00000479300 SMYD4Q8IYR2 804 aaPredicted RBP6.94□□□□□ -1.3
VCP-205ENST00000479300 RNF139Q8WU17 664 aa6.94□□□□□ -1.3
VCP-205ENST00000479300 SORCS1Q8WY21 1168 aa6.94□□□□□ -1.3
VCP-205ENST00000479300 GOLGA1Q92805 767 aa6.94□□□□□ -1.3
VCP-205ENST00000479300 DHTKD1Q96HY7 919 aaPredicted RBP6.94□□□□□ -1.3
VCP-205ENST00000479300 PIWIL1Q96J94 861 aaKnown RBP6.94□□□□□ -1.3
VCP-205ENST00000479300 CEP63Q96MT8 703 aa6.94□□□□□ -1.3
VCP-205ENST00000479300 CDC6Q99741 560 aa6.94□□□□□ -1.3
VCP-205ENST00000479300 UBXN6Q9BZV1 441 aa6.94□□□□□ -1.3
VCP-205ENST00000479300 L2HGDHQ9H9P8 463 aa6.94□□□□□ -1.3
VCP-205ENST00000479300 LRRC4Q9HBW1 653 aa6.94□□□□□ -1.3
VCP-205ENST00000479300 CYLDQ9NQC7 956 aa6.94□□□□□ -1.3
VCP-205ENST00000479300 CISHQ9NSE2 258 aa6.94□□□□□ -1.3
VCP-205ENST00000479300 ZNF446Q9NWS9 450 aa6.94□□□□□ -1.3
VCP-205ENST00000479300 THAP10Q9P2Z0 257 aaPredicted RBP6.94□□□□□ -1.3
VCP-205ENST00000479300 RASAL2Q9UJF2 1139 aa6.94□□□□□ -1.3
VCP-205ENST00000479300 NUDT5Q9UKK9 219 aa6.94□□□□□ -1.3
VCP-205ENST00000479300 KIAA1257Q9ULG3 409 aa6.94□□□□□ -1.3
VCP-205ENST00000479300 FHOD1Q9Y613 1164 aa6.94□□□□□ -1.3
VCP-205ENST00000479300 TP53BP1Q12888 1972 aaPredicted RBP6.93□□□□□ -1.3
VCP-205ENST00000479300 A0A1W2PQH9 124 aa6.93□□□□□ -1.3
VCP-205ENST00000479300 C3orf80F5H4A9 247 aa6.93□□□□□ -1.3
VCP-205ENST00000479300 TK2O00142 265 aa6.93□□□□□ -1.3
VCP-205ENST00000479300 TNFSF14O43557 240 aa6.93□□□□□ -1.3
VCP-205ENST00000479300 KIF1CO43896 1103 aaKnown RBP6.93□□□□□ -1.3
VCP-205ENST00000479300 STC2O76061 302 aa6.93□□□□□ -1.3
VCP-205ENST00000479300 ZRANB2O95218 330 aaKnown RBP eCLIP6.93□□□□□ -1.3
VCP-205ENST00000479300 GNA14O95837 355 aa6.93□□□□□ -1.3
VCP-205ENST00000479300 IVLP07476 585 aa6.93□□□□□ -1.3
VCP-205ENST00000479300 PNMA6AP0CW24 399 aaPredicted RBP6.93□□□□□ -1.3
VCP-205ENST00000479300 ACSL1P33121 698 aa6.93□□□□□ -1.3
VCP-205ENST00000479300 CHKAP35790 457 aa6.93□□□□□ -1.3
VCP-205ENST00000479300 EIF2S3P41091 472 aaKnown RBP6.93□□□□□ -1.3
VCP-205ENST00000479300 IL9RQ01113 521 aa6.93□□□□□ -1.3
VCP-205ENST00000479300 ARID5AQ03989 594 aa6.93□□□□□ -1.3
VCP-205ENST00000479300 LRMPQ12912 555 aa6.93□□□□□ -1.3
VCP-205ENST00000479300 ZNF234Q14588 700 aa6.93□□□□□ -1.3
VCP-205ENST00000479300 SHBQ15464 509 aa6.93□□□□□ -1.3
VCP-205ENST00000479300 GOLGA7BQ2TAP0 167 aa6.93□□□□□ -1.3
VCP-205ENST00000479300 ZCWPW2Q504Y3 356 aa6.93□□□□□ -1.3
VCP-205ENST00000479300 CCDC157Q569K6 752 aa6.93□□□□□ -1.3
VCP-205ENST00000479300 ARSIQ5FYB1 569 aa6.93□□□□□ -1.3
VCP-205ENST00000479300 PPP1R26Q5T8A7 1209 aaPredicted RBP6.93□□□□□ -1.3
VCP-205ENST00000479300 ISM2Q6H9L7 571 aa6.93□□□□□ -1.3
VCP-205ENST00000479300 KLHL10Q6JEL2 608 aa6.93□□□□□ -1.3
VCP-205ENST00000479300 KLHDC10Q6PID8 442 aa6.93□□□□□ -1.3
VCP-205ENST00000479300 SYT10Q6XYQ8 523 aa6.93□□□□□ -1.3
VCP-205ENST00000479300 CCDC186Q7Z3E2 898 aa6.93□□□□□ -1.3
VCP-205ENST00000479300 SCD5Q86SK9 330 aa6.93□□□□□ -1.3
VCP-205ENST00000479300 SRLQ86TD4 932 aa6.93□□□□□ -1.3
VCP-205ENST00000479300 FAM124AQ86V42 546 aa6.93□□□□□ -1.3
VCP-205ENST00000479300 SIX6OS1Q8N1H7 587 aa6.93□□□□□ -1.3
VCP-205ENST00000479300 GALNT15Q8N3T1 639 aa6.93□□□□□ -1.3
VCP-205ENST00000479300 ANKRD52Q8NB46 1076 aa6.93□□□□□ -1.3
VCP-205ENST00000479300 SPC24Q8NBT2 197 aa6.93□□□□□ -1.3
VCP-205ENST00000479300 UCMAQ8WVF2 138 aa6.93□□□□□ -1.3
VCP-205ENST00000479300 SIPA1Q96FS4 1042 aa6.93□□□□□ -1.3
VCP-205ENST00000479300 EEF2KMTQ96G04 330 aa6.93□□□□□ -1.3
VCP-205ENST00000479300 NT5C1BQ96P26 610 aa6.93□□□□□ -1.3
VCP-205ENST00000479300 TWNKQ96RR1 684 aa6.93□□□□□ -1.3
VCP-205ENST00000479300 APOBEC3GQ9HC16 384 aaKnown RBP6.93□□□□□ -1.3
VCP-205ENST00000479300 TM9SF3Q9HD45 589 aa6.93□□□□□ -1.3
VCP-205ENST00000479300 OLA1Q9NTK5 396 aaKnown RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 133.7 ms