RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 POLR2EP19388 210 aaKnown RBP21.74■■□□□ 1.07
SDF4-206ENST00000478938 ADSLP30566 484 aaPredicted RBP21.74■■□□□ 1.07
SDF4-206ENST00000478938 LGSNQ5TDP6 509 aa21.74■■□□□ 1.07
SDF4-206ENST00000478938 KCTD8Q6ZWB6 473 aa21.74■■□□□ 1.07
SDF4-206ENST00000478938 CHST15Q7LFX5 561 aaPredicted RBP21.74■■□□□ 1.07
SDF4-206ENST00000478938 C10orf107Q8IVU9 208 aa21.74■■□□□ 1.07
SDF4-206ENST00000478938 TFAP2CQ92754 450 aa21.74■■□□□ 1.07
SDF4-206ENST00000478938 OR52B2Q96RD2 323 aa21.74■■□□□ 1.07
SDF4-206ENST00000478938 SNX25Q9H3E2 840 aa21.74■■□□□ 1.07
SDF4-206ENST00000478938 RNPEPQ9H4A4 650 aa21.74■■□□□ 1.07
SDF4-206ENST00000478938 NOL11Q9H8H0 719 aaKnown RBP21.74■■□□□ 1.07
SDF4-206ENST00000478938 WDR41Q9HAD4 459 aa21.74■■□□□ 1.07
SDF4-206ENST00000478938 RABL2AQ9UBK7 228 aaPredicted RBP21.74■■□□□ 1.07
SDF4-206ENST00000478938 SERPINB13Q9UIV8 391 aa21.74■■□□□ 1.07
SDF4-206ENST00000478938 DDX60LQ5H9U9 1706 aaKnown RBP21.74■■□□□ 1.07
SDF4-206ENST00000478938 GOLGA8QA0A0J9YX86 632 aa21.74■■□□□ 1.07
SDF4-206ENST00000478938 GOLGA8OA6NCC3 632 aa21.74■■□□□ 1.07
SDF4-206ENST00000478938 GOLGA8NF8WBI6 632 aa21.74■■□□□ 1.07
SDF4-206ENST00000478938 SOCS2O14508 198 aa21.74■■□□□ 1.07
SDF4-206ENST00000478938 MATN1P21941 496 aa21.74■■□□□ 1.07
SDF4-206ENST00000478938 N4BP2L1Q5TBK1 243 aaPredicted RBP21.74■■□□□ 1.07
SDF4-206ENST00000478938 MAPK15Q8TD08 544 aa21.74■■□□□ 1.07
SDF4-206ENST00000478938 PPP1R36Q96LQ0 422 aa21.74■■□□□ 1.07
SDF4-206ENST00000478938 SMOXQ9NWM0 555 aa21.74■■□□□ 1.07
SDF4-206ENST00000478938 SEPT3Q9UH03 358 aa21.74■■□□□ 1.07
SDF4-206ENST00000478938 GPSM3Q9Y4H4 160 aa21.74■■□□□ 1.07
SDF4-206ENST00000478938 NHSQ6T4R5 1651 aa21.74■■□□□ 1.07
SDF4-206ENST00000478938 ZBTB5O15062 677 aa21.73■■□□□ 1.07
SDF4-206ENST00000478938 SERPINE1P05121 402 aa21.73■■□□□ 1.07
SDF4-206ENST00000478938 HIBADHP31937 336 aaKnown RBP21.73■■□□□ 1.07
SDF4-206ENST00000478938 IFITM3Q01628 133 aa21.73■■□□□ 1.07
SDF4-206ENST00000478938 MAMDC4Q6UXC1 1216 aa21.73■■□□□ 1.07
SDF4-206ENST00000478938 KCTD1Q719H9 257 aa21.73■■□□□ 1.07
SDF4-206ENST00000478938 UTS2BQ765I0 119 aa21.73■■□□□ 1.07
SDF4-206ENST00000478938 ZNF354CQ86Y25 554 aa21.73■■□□□ 1.07
SDF4-206ENST00000478938 KIAA2013Q8IYS2 634 aa21.73■■□□□ 1.07
SDF4-206ENST00000478938 TERB1Q8NA31 727 aa21.73■■□□□ 1.07
SDF4-206ENST00000478938 XXYLT1Q8NBI6 393 aa21.73■■□□□ 1.07
SDF4-206ENST00000478938 MTG1Q9BT17 334 aaPredicted RBP21.73■■□□□ 1.07
SDF4-206ENST00000478938 MARCH7Q9H992 704 aa21.73■■□□□ 1.07
SDF4-206ENST00000478938 PLAC1Q9HBJ0 212 aa21.73■■□□□ 1.07
SDF4-206ENST00000478938 SEL1LQ9UBV2 794 aa21.73■■□□□ 1.07
SDF4-206ENST00000478938 MOSPD1Q9UJG1 213 aa21.73■■□□□ 1.07
SDF4-206ENST00000478938 CLIC3O95833 236 aa21.73■■□□□ 1.07
SDF4-206ENST00000478938 GRK2P25098 689 aa21.73■■□□□ 1.07
SDF4-206ENST00000478938 GABRB2P47870 512 aa21.73■■□□□ 1.07
SDF4-206ENST00000478938 ZNF252P-AS1Q0IIN9 211 aa21.73■■□□□ 1.07
SDF4-206ENST00000478938 PCLAFQ15004 111 aa21.73■■□□□ 1.07
SDF4-206ENST00000478938 GRIK5Q16478 980 aa21.73■■□□□ 1.07
SDF4-206ENST00000478938 SIGIRRQ6IA17 410 aa21.73■■□□□ 1.07
SDF4-206ENST00000478938 HMBOX1Q6NT76 420 aa21.73■■□□□ 1.07
SDF4-206ENST00000478938 FAM117BQ6P1L5 589 aa21.73■■□□□ 1.07
SDF4-206ENST00000478938 ZBTB49Q6ZSB9 765 aa21.73■■□□□ 1.07
SDF4-206ENST00000478938 MRPL47Q9HD33 250 aaKnown RBP21.73■■□□□ 1.07
SDF4-206ENST00000478938 NAV1Q8NEY1 1877 aa21.72■■□□□ 1.07
SDF4-206ENST00000478938 ZNF543Q08ER8 600 aa21.72■■□□□ 1.07
SDF4-206ENST00000478938 CBWD2Q8IUF1 395 aa21.72■■□□□ 1.07
SDF4-206ENST00000478938 TNIP2Q8NFZ5 429 aa21.72■■□□□ 1.07
SDF4-206ENST00000478938 PGBD4Q96DM1 585 aa21.72■■□□□ 1.07
SDF4-206ENST00000478938 ACO2Q99798 780 aaKnown RBP21.72■■□□□ 1.07
SDF4-206ENST00000478938 CD209Q9NNX6 404 aa21.72■■□□□ 1.07
SDF4-206ENST00000478938 PARVAQ9NVD7 372 aa21.72■■□□□ 1.07
SDF4-206ENST00000478938 TBC1D14Q9P2M4 693 aa21.72■■□□□ 1.07
SDF4-206ENST00000478938 PTBP2Q9UKA9 531 aaKnown RBP21.72■■□□□ 1.07
SDF4-206ENST00000478938 TRPC3Q13507 836 aa21.72■■□□□ 1.07
SDF4-206ENST00000478938 CCDC58Q4VC31 144 aa21.72■■□□□ 1.07
SDF4-206ENST00000478938 TMA16Q96EY4 203 aaKnown RBP21.72■■□□□ 1.07
SDF4-206ENST00000478938 HOXD1Q9GZZ0 328 aa21.72■■□□□ 1.07
SDF4-206ENST00000478938 PCDHAC1Q9H158 963 aa21.72■■□□□ 1.07
SDF4-206ENST00000478938 VPS28Q9UK41 221 aa21.72■■□□□ 1.07
SDF4-206ENST00000478938 AGO2Q9UKV8 859 aaKnown RBP21.72■■□□□ 1.07
SDF4-206ENST00000478938 GCATO75600 419 aa21.71■■□□□ 1.07
SDF4-206ENST00000478938 CXCR2P25025 360 aa21.71■■□□□ 1.07
SDF4-206ENST00000478938 TTKP33981 857 aa21.71■■□□□ 1.07
SDF4-206ENST00000478938 TNK2Q07912 1038 aa21.71■■□□□ 1.07
SDF4-206ENST00000478938 FEZF2Q8TBJ5 459 aa21.71■■□□□ 1.07
SDF4-206ENST00000478938 ZNF486Q96H40 463 aaPredicted RBP21.71■■□□□ 1.07
SDF4-206ENST00000478938 FEM1CQ96JP0 617 aa21.71■■□□□ 1.07
SDF4-206ENST00000478938 EGLN2Q96KS0 407 aa21.71■■□□□ 1.07
SDF4-206ENST00000478938 STRA6Q9BX79 667 aa21.71■■□□□ 1.07
SDF4-206ENST00000478938 SCUBE2Q9NQ36 999 aa21.71■■□□□ 1.07
SDF4-206ENST00000478938 CNGB3Q9NQW8 809 aa21.71■■□□□ 1.07
SDF4-206ENST00000478938 ZC3H7BQ9UGR2 993 aaKnown RBP21.71■■□□□ 1.07
SDF4-206ENST00000478938 AGTPBP1Q9UPW5 1226 aa21.71■■□□□ 1.07
SDF4-206ENST00000478938 KMOO15229 486 aa21.71■■□□□ 1.07
SDF4-206ENST00000478938 CST8O60676 142 aa21.71■■□□□ 1.07
SDF4-206ENST00000478938 TGM1P22735 817 aa21.71■■□□□ 1.07
SDF4-206ENST00000478938 YWHAZP63104 245 aaKnown RBP21.71■■□□□ 1.07
SDF4-206ENST00000478938 DPYSL3Q14195 570 aa21.71■■□□□ 1.07
SDF4-206ENST00000478938 SHROOM1Q2M3G4 852 aaPredicted RBP21.71■■□□□ 1.07
SDF4-206ENST00000478938 ATAD3BQ5T9A4 648 aa21.71■■□□□ 1.07
SDF4-206ENST00000478938 TRMT10BQ6PF06 316 aaKnown RBP21.71■■□□□ 1.07
SDF4-206ENST00000478938 ANKRD13BQ86YJ7 626 aa21.71■■□□□ 1.07
SDF4-206ENST00000478938 PGAM4Q8N0Y7 254 aa21.71■■□□□ 1.07
SDF4-206ENST00000478938 SLCO4A1Q96BD0 722 aa21.71■■□□□ 1.07
SDF4-206ENST00000478938 ZNF347Q96SE7 839 aa21.71■■□□□ 1.07
SDF4-206ENST00000478938 PNPLA8Q9NP80 782 aa21.71■■□□□ 1.07
SDF4-206ENST00000478938 POLE4Q9NR33 117 aa21.71■■□□□ 1.07
SDF4-206ENST00000478938 C20orf96Q9NUD7 363 aaPredicted RBP21.71■■□□□ 1.07
SDF4-206ENST00000478938 CDK5RAP2Q96SN8 1893 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms