RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 ARID5BQ14865 1188 aa7.12□□□□□ -1.27
BRCA1-215ENST00000478531 ARL13BQ3SXY8 428 aa7.12□□□□□ -1.27
BRCA1-215ENST00000478531 DAB2IPQ5VWQ8 1189 aa7.12□□□□□ -1.27
BRCA1-215ENST00000478531 EGFLAMQ63HQ2 1017 aa7.12□□□□□ -1.27
BRCA1-215ENST00000478531 HEATR6Q6AI08 1181 aaKnown RBP7.12□□□□□ -1.27
BRCA1-215ENST00000478531 STRADAQ7RTN6 431 aa7.12□□□□□ -1.27
BRCA1-215ENST00000478531 BNIPLQ7Z465 357 aa7.12□□□□□ -1.27
BRCA1-215ENST00000478531 C14orf80Q86SX3 495 aa7.12□□□□□ -1.27
BRCA1-215ENST00000478531 TXNDC5Q8NBS9 432 aaKnown RBP7.12□□□□□ -1.27
BRCA1-215ENST00000478531 CCDC26Q8TAB7 109 aa7.12□□□□□ -1.27
BRCA1-215ENST00000478531 USP33Q8TEY7 942 aa7.12□□□□□ -1.27
BRCA1-215ENST00000478531 SORCS1Q8WY21 1168 aa7.12□□□□□ -1.27
BRCA1-215ENST00000478531 IGSF8Q969P0 613 aa7.12□□□□□ -1.27
BRCA1-215ENST00000478531 ACDQ96AP0 544 aa7.12□□□□□ -1.27
BRCA1-215ENST00000478531 ARHGEF26Q96DR7 871 aa7.12□□□□□ -1.27
BRCA1-215ENST00000478531 BTBD6Q96KE9 485 aa7.12□□□□□ -1.27
BRCA1-215ENST00000478531 PRRX2Q99811 253 aa7.12□□□□□ -1.27
BRCA1-215ENST00000478531 CNPY3Q9BT09 278 aa7.12□□□□□ -1.27
BRCA1-215ENST00000478531 IER2Q9BTL4 223 aa7.12□□□□□ -1.27
BRCA1-215ENST00000478531 NUP85Q9BW27 656 aa7.12□□□□□ -1.27
BRCA1-215ENST00000478531 MRPL47Q9HD33 250 aaKnown RBP7.12□□□□□ -1.27
BRCA1-215ENST00000478531 PRMT8Q9NR22 394 aaPredicted RBP7.12□□□□□ -1.27
BRCA1-215ENST00000478531 GGA2Q9UJY4 613 aa7.12□□□□□ -1.27
BRCA1-215ENST00000478531 FBXO10Q9UK96 956 aa7.12□□□□□ -1.27
BRCA1-215ENST00000478531 SLC8A2Q9UPR5 921 aa7.12□□□□□ -1.27
BRCA1-215ENST00000478531 A0A1B0GVM2 712 aa7.11□□□□□ -1.27
BRCA1-215ENST00000478531 TCAF2A6NFQ2 919 aa7.11□□□□□ -1.27
BRCA1-215ENST00000478531 TMEM191CA6NGB0 347 aa7.11□□□□□ -1.27
BRCA1-215ENST00000478531 E9PAM4 449 aa7.11□□□□□ -1.27
BRCA1-215ENST00000478531 ATG13O75143 517 aa7.11□□□□□ -1.27
BRCA1-215ENST00000478531 CNTN5O94779 1100 aa7.11□□□□□ -1.27
BRCA1-215ENST00000478531 ENDOD1O94919 500 aa7.11□□□□□ -1.27
BRCA1-215ENST00000478531 PABPC1P11940 636 aaKnown RBP7.11□□□□□ -1.27
BRCA1-215ENST00000478531 KIR2DL1P43626 348 aaPredicted RBP7.11□□□□□ -1.27
BRCA1-215ENST00000478531 PXNP49023 591 aaPredicted RBP7.11□□□□□ -1.27
BRCA1-215ENST00000478531 PTPN5P54829 565 aa7.11□□□□□ -1.27
BRCA1-215ENST00000478531 ZNF252P-AS1Q0IIN9 211 aa7.11□□□□□ -1.27
BRCA1-215ENST00000478531 LMAN2Q12907 356 aa7.11□□□□□ -1.27
BRCA1-215ENST00000478531 MTA1Q13330 715 aa7.11□□□□□ -1.27
BRCA1-215ENST00000478531 DMC1Q14565 340 aa7.11□□□□□ -1.27
BRCA1-215ENST00000478531 FUT11Q495W5 492 aa7.11□□□□□ -1.27
BRCA1-215ENST00000478531 FSCBQ5H9T9 825 aa7.11□□□□□ -1.27
BRCA1-215ENST00000478531 MPP7Q5T2T1 576 aa7.11□□□□□ -1.27
BRCA1-215ENST00000478531 TTC39BQ5VTQ0 682 aaPredicted RBP7.11□□□□□ -1.27
BRCA1-215ENST00000478531 RWDD4Q6NW29 188 aaKnown RBP7.11□□□□□ -1.27
BRCA1-215ENST00000478531 LRRC31Q6UY01 552 aa7.11□□□□□ -1.27
BRCA1-215ENST00000478531 CHST9Q7L1S5 443 aa7.11□□□□□ -1.27
BRCA1-215ENST00000478531 TFAP2DQ7Z6R9 452 aa7.11□□□□□ -1.27
BRCA1-215ENST00000478531 CHPFQ8IZ52 775 aa7.11□□□□□ -1.27
BRCA1-215ENST00000478531 MAML2Q8IZL2 1156 aaPredicted RBP7.11□□□□□ -1.27
BRCA1-215ENST00000478531 CCAR2Q8N163 923 aaKnown RBP7.11□□□□□ -1.27
BRCA1-215ENST00000478531 IL17RCQ8NAC3 791 aa7.11□□□□□ -1.27
BRCA1-215ENST00000478531 CYB5D2Q8WUJ1 264 aa7.11□□□□□ -1.27
BRCA1-215ENST00000478531 CTNNBL1Q8WYA6 563 aaPredicted RBP7.11□□□□□ -1.27
BRCA1-215ENST00000478531 CENPIQ92674 756 aaPredicted RBP7.11□□□□□ -1.27
BRCA1-215ENST00000478531 ATOH1Q92858 354 aaPredicted RBP7.11□□□□□ -1.27
BRCA1-215ENST00000478531 ACOX2Q99424 681 aa7.11□□□□□ -1.27
BRCA1-215ENST00000478531 SLC2A11Q9BYW1 496 aa7.11□□□□□ -1.27
BRCA1-215ENST00000478531 CACNA2D2Q9NY47 1150 aa7.11□□□□□ -1.27
BRCA1-215ENST00000478531 MPP6Q9NZW5 540 aa7.11□□□□□ -1.27
BRCA1-215ENST00000478531 CTTNBP2NLQ9P2B4 639 aa7.11□□□□□ -1.27
BRCA1-215ENST00000478531 OR12D3Q9UGF7 316 aa7.11□□□□□ -1.27
BRCA1-215ENST00000478531 PCSK1NQ9UHG2 260 aa7.11□□□□□ -1.27
BRCA1-215ENST00000478531 ANAPC7Q9UJX3 599 aa7.11□□□□□ -1.27
BRCA1-215ENST00000478531 MMP17Q9ULZ9 603 aa7.11□□□□□ -1.27
BRCA1-215ENST00000478531 NENFQ9UMX5 172 aa7.11□□□□□ -1.27
BRCA1-215ENST00000478531 SLC27A6Q9Y2P4 619 aa7.11□□□□□ -1.27
BRCA1-215ENST00000478531 EP300Q09472 2414 aaPredicted RBP7.11□□□□□ -1.27
BRCA1-215ENST00000478531 SGK1O00141 431 aa7.11□□□□□ -1.27
BRCA1-215ENST00000478531 ADAM23O75077 832 aa7.11□□□□□ -1.27
BRCA1-215ENST00000478531 RNF8O76064 485 aa7.11□□□□□ -1.27
BRCA1-215ENST00000478531 CYP1A2P05177 515 aa7.11□□□□□ -1.27
BRCA1-215ENST00000478531 SP9P0CG40 484 aa7.11□□□□□ -1.27
BRCA1-215ENST00000478531 CDC25BP30305 580 aa7.11□□□□□ -1.27
BRCA1-215ENST00000478531 ADRA1BP35368 520 aa7.11□□□□□ -1.27
BRCA1-215ENST00000478531 MRPS21P82921 87 aaKnown RBP7.11□□□□□ -1.27
BRCA1-215ENST00000478531 DMWDQ09019 674 aa7.11□□□□□ -1.27
BRCA1-215ENST00000478531 ASTE1Q2TB18 679 aaPredicted RBP7.11□□□□□ -1.27
BRCA1-215ENST00000478531 FNDC3BQ53EP0 1204 aaKnown RBP7.11□□□□□ -1.27
BRCA1-215ENST00000478531 ALFQ53S48 1182 aa7.11□□□□□ -1.27
BRCA1-215ENST00000478531 EFHC2Q5JST6 749 aa7.11□□□□□ -1.27
BRCA1-215ENST00000478531 TMEM215Q68D42 235 aa7.11□□□□□ -1.27
BRCA1-215ENST00000478531 TRMT11Q7Z4G4 463 aaKnown RBP7.11□□□□□ -1.27
BRCA1-215ENST00000478531 SLFN11Q7Z7L1 901 aa7.11□□□□□ -1.27
BRCA1-215ENST00000478531 AHI1Q8N157 1196 aa7.11□□□□□ -1.27
BRCA1-215ENST00000478531 PYROXD2Q8N2H3 581 aa7.11□□□□□ -1.27
BRCA1-215ENST00000478531 FIBINQ8TAL6 211 aa7.11□□□□□ -1.27
BRCA1-215ENST00000478531 ZNF564Q8TBZ8 553 aaPredicted RBP7.11□□□□□ -1.27
BRCA1-215ENST00000478531 UCMAQ8WVF2 138 aa7.11□□□□□ -1.27
BRCA1-215ENST00000478531 HAPLN3Q96S86 360 aa7.11□□□□□ -1.27
BRCA1-215ENST00000478531 MAGEB5Q9BZ81 275 aa7.11□□□□□ -1.27
BRCA1-215ENST00000478531 IRX2Q9BZI1 471 aaPredicted RBP7.11□□□□□ -1.27
BRCA1-215ENST00000478531 TMEM51Q9NW97 253 aa7.11□□□□□ -1.27
BRCA1-215ENST00000478531 GPATCH2LQ9NWQ4 482 aa7.11□□□□□ -1.27
BRCA1-215ENST00000478531 HCN2Q9UL51 889 aa7.11□□□□□ -1.27
BRCA1-215ENST00000478531 RAD54BQ9Y620 910 aa7.11□□□□□ -1.27
BRCA1-215ENST00000478531 NUP205Q92621 2012 aa7.11□□□□□ -1.27
BRCA1-215ENST00000478531 GPR179Q6PRD1 2367 aa7.1□□□□□ -1.27
BRCA1-215ENST00000478531 CHD5Q8TDI0 1954 aa7.1□□□□□ -1.27
BRCA1-215ENST00000478531 A0A0A0MRY4 1105 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms