RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 VANGL2Q9ULK5 521 aa10.62□□□□□ -0.71
HDAC6-222ENST00000478095 NENFQ9UMX5 172 aa10.62□□□□□ -0.71
HDAC6-222ENST00000478095 PAXBP1Q9Y5B6 917 aa10.62□□□□□ -0.71
HDAC6-222ENST00000478095 SCINQ9Y6U3 715 aa10.62□□□□□ -0.71
HDAC6-222ENST00000478095 SSU72P8A0A1W2PR75 194 aa10.61□□□□□ -0.71
HDAC6-222ENST00000478095 ENDOD1O94919 500 aa10.61□□□□□ -0.71
HDAC6-222ENST00000478095 KLF8O95600 359 aaPredicted RBP10.61□□□□□ -0.71
HDAC6-222ENST00000478095 PSMA2P25787 234 aa10.61□□□□□ -0.71
HDAC6-222ENST00000478095 HLA-FP30511 346 aa10.61□□□□□ -0.71
HDAC6-222ENST00000478095 CD70P32970 193 aa10.61□□□□□ -0.71
HDAC6-222ENST00000478095 WASP42768 502 aa10.61□□□□□ -0.71
HDAC6-222ENST00000478095 TNFRSF4P43489 277 aa10.61□□□□□ -0.71
HDAC6-222ENST00000478095 KIR2DL1P43626 348 aaPredicted RBP10.61□□□□□ -0.71
HDAC6-222ENST00000478095 CXCL12P48061 93 aa10.61□□□□□ -0.71
HDAC6-222ENST00000478095 CCR3P51677 355 aa10.61□□□□□ -0.71
HDAC6-222ENST00000478095 GALCP54803 685 aa10.61□□□□□ -0.71
HDAC6-222ENST00000478095 ZNF252P-AS1Q0IIN9 211 aa10.61□□□□□ -0.71
HDAC6-222ENST00000478095 CDH18Q13634 790 aa10.61□□□□□ -0.71
HDAC6-222ENST00000478095 SLC18A3Q16572 532 aa10.61□□□□□ -0.71
HDAC6-222ENST00000478095 ASTE1Q2TB18 679 aaPredicted RBP10.61□□□□□ -0.71
HDAC6-222ENST00000478095 PREPLQ4J6C6 727 aaPredicted RBP10.61□□□□□ -0.71
HDAC6-222ENST00000478095 RABGAP1LQ5R372 815 aa10.61□□□□□ -0.71
HDAC6-222ENST00000478095 MPP7Q5T2T1 576 aa10.61□□□□□ -0.71
HDAC6-222ENST00000478095 EGFLAMQ63HQ2 1017 aa10.61□□□□□ -0.71
HDAC6-222ENST00000478095 SCYL2Q6P3W7 929 aa10.61□□□□□ -0.71
HDAC6-222ENST00000478095 STRADAQ7RTN6 431 aa10.61□□□□□ -0.71
HDAC6-222ENST00000478095 ANKS1BQ7Z6G8 1248 aa10.61□□□□□ -0.71
HDAC6-222ENST00000478095 ALLCQ8N6M5 410 aa10.61□□□□□ -0.71
HDAC6-222ENST00000478095 CCDC185Q8N715 623 aa10.61□□□□□ -0.71
HDAC6-222ENST00000478095 ZNF513Q8N8E2 541 aaPredicted RBP10.61□□□□□ -0.71
HDAC6-222ENST00000478095 TXNDC5Q8NBS9 432 aaKnown RBP10.61□□□□□ -0.71
HDAC6-222ENST00000478095 SPC24Q8NBT2 197 aa10.61□□□□□ -0.71
HDAC6-222ENST00000478095 SORCS1Q8WY21 1168 aa10.61□□□□□ -0.71
HDAC6-222ENST00000478095 CENPIQ92674 756 aaPredicted RBP10.61□□□□□ -0.71
HDAC6-222ENST00000478095 CCDC42Q96M95 316 aa10.61□□□□□ -0.71
HDAC6-222ENST00000478095 ACOX2Q99424 681 aa10.61□□□□□ -0.71
HDAC6-222ENST00000478095 CNPY3Q9BT09 278 aa10.61□□□□□ -0.71
HDAC6-222ENST00000478095 IER2Q9BTL4 223 aa10.61□□□□□ -0.71
HDAC6-222ENST00000478095 MAGEB5Q9BZ81 275 aa10.61□□□□□ -0.71
HDAC6-222ENST00000478095 CIPCQ9C0C6 399 aa10.61□□□□□ -0.71
HDAC6-222ENST00000478095 PRMT8Q9NR22 394 aaPredicted RBP10.61□□□□□ -0.71
HDAC6-222ENST00000478095 FAM86C1Q9NVL1 165 aa10.61□□□□□ -0.71
HDAC6-222ENST00000478095 GGA2Q9UJY4 613 aa10.61□□□□□ -0.71
HDAC6-222ENST00000478095 HCN2Q9UL51 889 aa10.61□□□□□ -0.71
HDAC6-222ENST00000478095 SLC27A6Q9Y2P4 619 aa10.61□□□□□ -0.71
HDAC6-222ENST00000478095 A0A0A0MRY4 1105 aa10.6□□□□□ -0.71
HDAC6-222ENST00000478095 TMEM191CA6NGB0 347 aa10.6□□□□□ -0.71
HDAC6-222ENST00000478095 H0Y626 953 aa10.6□□□□□ -0.71
HDAC6-222ENST00000478095 SGK1O00141 431 aa10.6□□□□□ -0.71
HDAC6-222ENST00000478095 SRGAP2O75044 1071 aa10.6□□□□□ -0.71
HDAC6-222ENST00000478095 ATG13O75143 517 aa10.6□□□□□ -0.71
HDAC6-222ENST00000478095 CNTN5O94779 1100 aa10.6□□□□□ -0.71
HDAC6-222ENST00000478095 LUC7L3O95232 432 aaKnown RBP10.6□□□□□ -0.71
HDAC6-222ENST00000478095 PABPC1P11940 636 aaKnown RBP10.6□□□□□ -0.71
HDAC6-222ENST00000478095 ADRA1BP35368 520 aa10.6□□□□□ -0.71
HDAC6-222ENST00000478095 PXNP49023 591 aaPredicted RBP10.6□□□□□ -0.71
HDAC6-222ENST00000478095 DMWDQ09019 674 aa10.6□□□□□ -0.71
HDAC6-222ENST00000478095 LMAN2Q12907 356 aa10.6□□□□□ -0.71
HDAC6-222ENST00000478095 DMC1Q14565 340 aa10.6□□□□□ -0.71
HDAC6-222ENST00000478095 ARL13BQ3SXY8 428 aa10.6□□□□□ -0.71
HDAC6-222ENST00000478095 FSCBQ5H9T9 825 aa10.6□□□□□ -0.71
HDAC6-222ENST00000478095 DAB2IPQ5VWQ8 1189 aa10.6□□□□□ -0.71
HDAC6-222ENST00000478095 TMEM215Q68D42 235 aa10.6□□□□□ -0.71
HDAC6-222ENST00000478095 RNF43Q68DV7 783 aa10.6□□□□□ -0.71
HDAC6-222ENST00000478095 NUDT18Q6ZVK8 323 aa10.6□□□□□ -0.71
HDAC6-222ENST00000478095 CCDC117Q8IWD4 279 aaPredicted RBP10.6□□□□□ -0.71
HDAC6-222ENST00000478095 CCAR2Q8N163 923 aaKnown RBP10.6□□□□□ -0.71
HDAC6-222ENST00000478095 IL17RCQ8NAC3 791 aa10.6□□□□□ -0.71
HDAC6-222ENST00000478095 RNF166Q96A37 237 aaPredicted RBP10.6□□□□□ -0.71
HDAC6-222ENST00000478095 ACDQ96AP0 544 aa10.6□□□□□ -0.71
HDAC6-222ENST00000478095 BTBD6Q96KE9 485 aa10.6□□□□□ -0.71
HDAC6-222ENST00000478095 HHIPQ96QV1 700 aa10.6□□□□□ -0.71
HDAC6-222ENST00000478095 PRRX2Q99811 253 aa10.6□□□□□ -0.71
HDAC6-222ENST00000478095 NUP85Q9BW27 656 aa10.6□□□□□ -0.71
HDAC6-222ENST00000478095 SLC2A11Q9BYW1 496 aa10.6□□□□□ -0.71
HDAC6-222ENST00000478095 MRPL47Q9HD33 250 aaKnown RBP10.6□□□□□ -0.71
HDAC6-222ENST00000478095 MPP6Q9NZW5 540 aa10.6□□□□□ -0.71
HDAC6-222ENST00000478095 SLC8A2Q9UPR5 921 aa10.6□□□□□ -0.71
HDAC6-222ENST00000478095 A0A1B0GVM2 712 aa10.59□□□□□ -0.71
HDAC6-222ENST00000478095 TCAF2A6NFQ2 919 aa10.59□□□□□ -0.71
HDAC6-222ENST00000478095 CHURC1-FNTBB4DL54 471 aa10.59□□□□□ -0.71
HDAC6-222ENST00000478095 WASH3PC4AMC7 463 aa10.59□□□□□ -0.71
HDAC6-222ENST00000478095 E9PAM4 449 aa10.59□□□□□ -0.71
HDAC6-222ENST00000478095 FAM72CH0Y354 149 aa10.59□□□□□ -0.71
HDAC6-222ENST00000478095 ADAM23O75077 832 aa10.59□□□□□ -0.71
HDAC6-222ENST00000478095 CYP1A2P05177 515 aa10.59□□□□□ -0.71
HDAC6-222ENST00000478095 SP9P0CG40 484 aa10.59□□□□□ -0.71
HDAC6-222ENST00000478095 HNRNPLP14866 589 aaKnown RBP eCLIP10.59□□□□□ -0.71
HDAC6-222ENST00000478095 DESP17661 470 aa10.59□□□□□ -0.71
HDAC6-222ENST00000478095 CDC25BP30305 580 aa10.59□□□□□ -0.71
HDAC6-222ENST00000478095 PTPN5P54829 565 aa10.59□□□□□ -0.71
HDAC6-222ENST00000478095 MRPS21P82921 87 aaKnown RBP10.59□□□□□ -0.71
HDAC6-222ENST00000478095 MTA1Q13330 715 aa10.59□□□□□ -0.71
HDAC6-222ENST00000478095 FUT11Q495W5 492 aa10.59□□□□□ -0.71
HDAC6-222ENST00000478095 ALFQ53S48 1182 aa10.59□□□□□ -0.71
HDAC6-222ENST00000478095 C6orf132Q5T0Z8 1188 aa10.59□□□□□ -0.71
HDAC6-222ENST00000478095 FAM72AQ5TYM5 149 aa10.59□□□□□ -0.71
HDAC6-222ENST00000478095 TTC39BQ5VTQ0 682 aaPredicted RBP10.59□□□□□ -0.71
HDAC6-222ENST00000478095 HEATR6Q6AI08 1181 aaKnown RBP10.59□□□□□ -0.71
HDAC6-222ENST00000478095 FAM72DQ6L9T8 149 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms