RNA–Protein interactions for RNA: ENST00000478048.5

CBWD3-206, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-206ENST00000478048 CPXM2Q8N436 756 aa11.85□□□□□ -0.51
CBWD3-206ENST00000478048 ATP2A3Q93084 1043 aa11.85□□□□□ -0.51
CBWD3-206ENST00000478048 NTAN1Q96AB6 310 aa11.85□□□□□ -0.51
CBWD3-206ENST00000478048 OTUB2Q96DC9 234 aa11.85□□□□□ -0.51
CBWD3-206ENST00000478048 PRICKLE1Q96MT3 831 aaPredicted RBP11.85□□□□□ -0.51
CBWD3-206ENST00000478048 PRMT1Q99873 361 aaKnown RBP11.85□□□□□ -0.51
CBWD3-206ENST00000478048 SNRNP25Q9BV90 132 aaKnown RBP11.85□□□□□ -0.51
CBWD3-206ENST00000478048 ZWILCHQ9H900 591 aa11.85□□□□□ -0.51
CBWD3-206ENST00000478048 SPHK2Q9NRA0 654 aa11.85□□□□□ -0.51
CBWD3-206ENST00000478048 PLK2Q9NYY3 685 aa11.85□□□□□ -0.51
CBWD3-206ENST00000478048 FZD10Q9ULW2 581 aa11.85□□□□□ -0.51
CBWD3-206ENST00000478048 CAPN6Q9Y6Q1 641 aa11.85□□□□□ -0.51
CBWD3-206ENST00000478048 GRID2IPA4D2P6 1211 aa11.84□□□□□ -0.51
CBWD3-206ENST00000478048 AXIN1O15169 862 aa11.84□□□□□ -0.51
CBWD3-206ENST00000478048 KRT86O43790 486 aa11.84□□□□□ -0.51
CBWD3-206ENST00000478048 PRPSAP2O60256 369 aa11.84□□□□□ -0.51
CBWD3-206ENST00000478048 COMTP21964 271 aa11.84□□□□□ -0.51
CBWD3-206ENST00000478048 MAN1A1P33908 653 aa11.84□□□□□ -0.51
CBWD3-206ENST00000478048 CHKAP35790 457 aa11.84□□□□□ -0.51
CBWD3-206ENST00000478048 IRAK1P51617 712 aa11.84□□□□□ -0.51
CBWD3-206ENST00000478048 MLLT6P55198 1093 aaPredicted RBP11.84□□□□□ -0.51
CBWD3-206ENST00000478048 AUHQ13825 339 aaKnown RBP11.84□□□□□ -0.51
CBWD3-206ENST00000478048 GAB4Q2WGN9 574 aa11.84□□□□□ -0.51
CBWD3-206ENST00000478048 ARL13BQ3SXY8 428 aa11.84□□□□□ -0.51
CBWD3-206ENST00000478048 ATP13A4Q4VNC1 1196 aa11.84□□□□□ -0.51
CBWD3-206ENST00000478048 NAIF1Q69YI7 327 aaPredicted RBP11.84□□□□□ -0.51
CBWD3-206ENST00000478048 FBXL22Q6P050 247 aa11.84□□□□□ -0.51
CBWD3-206ENST00000478048 REXO1L1PQ8IX06 675 aa11.84□□□□□ -0.51
CBWD3-206ENST00000478048 LGI2Q8N0V4 545 aa11.84□□□□□ -0.51
CBWD3-206ENST00000478048 TXLNBQ8N3L3 684 aa11.84□□□□□ -0.51
CBWD3-206ENST00000478048 IGSF8Q969P0 613 aa11.84□□□□□ -0.51
CBWD3-206ENST00000478048 CHFRQ96EP1 664 aa11.84□□□□□ -0.51
CBWD3-206ENST00000478048 HAPLN3Q96S86 360 aa11.84□□□□□ -0.51
CBWD3-206ENST00000478048 SLC2A4RGQ9NR83 387 aa11.84□□□□□ -0.51
CBWD3-206ENST00000478048 HEBP1Q9NRV9 189 aa11.84□□□□□ -0.51
CBWD3-206ENST00000478048 TRMT1Q9NXH9 659 aaKnown RBP11.84□□□□□ -0.51
CBWD3-206ENST00000478048 VANGL2Q9ULK5 521 aa11.84□□□□□ -0.51
CBWD3-206ENST00000478048 ALG6Q9Y672 507 aa11.84□□□□□ -0.51
CBWD3-206ENST00000478048 DOCK4Q8N1I0 1966 aa11.84□□□□□ -0.51
CBWD3-206ENST00000478048 TTC24A2A3L6 582 aaPredicted RBP11.83□□□□□ -0.52
CBWD3-206ENST00000478048 USP27XA6NNY8 438 aa11.83□□□□□ -0.52
CBWD3-206ENST00000478048 NEDD8-MDP1E9PL57 170 aa11.83□□□□□ -0.52
CBWD3-206ENST00000478048 NFATC1O95644 943 aa11.83□□□□□ -0.52
CBWD3-206ENST00000478048 RARAP10276 462 aa11.83□□□□□ -0.52
CBWD3-206ENST00000478048 GJC1P36383 396 aa11.83□□□□□ -0.52
CBWD3-206ENST00000478048 SMCPP49901 116 aaPredicted RBP11.83□□□□□ -0.52
CBWD3-206ENST00000478048 RPS24P62847 133 aaKnown RBP11.83□□□□□ -0.52
CBWD3-206ENST00000478048 SCAPQ12770 1279 aa11.83□□□□□ -0.52
CBWD3-206ENST00000478048 ANO4Q32M45 955 aa11.83□□□□□ -0.52
CBWD3-206ENST00000478048 ERMARDQ5T6L9 678 aa11.83□□□□□ -0.52
CBWD3-206ENST00000478048 ZNF662Q6ZS27 426 aa11.83□□□□□ -0.52
CBWD3-206ENST00000478048 DAAM2Q86T65 1068 aa11.83□□□□□ -0.52
CBWD3-206ENST00000478048 CIR1Q86X95 450 aaPredicted RBP11.83□□□□□ -0.52
CBWD3-206ENST00000478048 ZNF683Q8IZ20 524 aa11.83□□□□□ -0.52
CBWD3-206ENST00000478048 CFAP52Q8N1V2 620 aa11.83□□□□□ -0.52
CBWD3-206ENST00000478048 LRRC57Q8N9N7 239 aa11.83□□□□□ -0.52
CBWD3-206ENST00000478048 USB1Q9BQ65 265 aaKnown RBP11.83□□□□□ -0.52
CBWD3-206ENST00000478048 BBS2Q9BXC9 721 aa11.83□□□□□ -0.52
CBWD3-206ENST00000478048 TSGA10Q9BZW7 698 aa11.83□□□□□ -0.52
CBWD3-206ENST00000478048 DHX35Q9H5Z1 703 aaKnown RBP11.83□□□□□ -0.52
CBWD3-206ENST00000478048 TMEM51Q9NW97 253 aa11.83□□□□□ -0.52
CBWD3-206ENST00000478048 OR12D3Q9UGF7 316 aa11.83□□□□□ -0.52
CBWD3-206ENST00000478048 LCMT1Q9UIC8 334 aa11.83□□□□□ -0.52
CBWD3-206ENST00000478048 CLEC4EQ9ULY5 219 aa11.83□□□□□ -0.52
CBWD3-206ENST00000478048 AP4E1Q9UPM8 1137 aa11.83□□□□□ -0.52
CBWD3-206ENST00000478048 MIA3Q5JRA6 1907 aa11.83□□□□□ -0.52
CBWD3-206ENST00000478048 F5H5T6 163 aa11.83□□□□□ -0.52
CBWD3-206ENST00000478048 SRGAP2O75044 1071 aa11.83□□□□□ -0.52
CBWD3-206ENST00000478048 PALMO75781 387 aa11.83□□□□□ -0.52
CBWD3-206ENST00000478048 ADH5P11766 374 aa11.83□□□□□ -0.52
CBWD3-206ENST00000478048 TNNT1P13805 278 aa11.83□□□□□ -0.52
CBWD3-206ENST00000478048 GJA4P35212 333 aa11.83□□□□□ -0.52
CBWD3-206ENST00000478048 ITPRIPL2Q3MIP1 535 aa11.83□□□□□ -0.52
CBWD3-206ENST00000478048 EFHC2Q5JST6 749 aa11.83□□□□□ -0.52
CBWD3-206ENST00000478048 FYB2Q5VWT5 728 aa11.83□□□□□ -0.52
CBWD3-206ENST00000478048 C11orf63Q6NUN7 778 aa11.83□□□□□ -0.52
CBWD3-206ENST00000478048 C12orf40Q86WS4 652 aa11.83□□□□□ -0.52
CBWD3-206ENST00000478048 CPA6Q8N4T0 437 aa11.83□□□□□ -0.52
CBWD3-206ENST00000478048 NAT16Q8N8M0 369 aa11.83□□□□□ -0.52
CBWD3-206ENST00000478048 CSGALNACT1Q8TDX6 532 aa11.83□□□□□ -0.52
CBWD3-206ENST00000478048 DDI1Q8WTU0 396 aa11.83□□□□□ -0.52
CBWD3-206ENST00000478048 HSPH1Q92598 858 aa11.83□□□□□ -0.52
CBWD3-206ENST00000478048 DNASE1L2Q92874 299 aa11.83□□□□□ -0.52
CBWD3-206ENST00000478048 TMA16Q96EY4 203 aaKnown RBP11.83□□□□□ -0.52
CBWD3-206ENST00000478048 C1orf74Q96LT6 269 aa11.83□□□□□ -0.52
CBWD3-206ENST00000478048 NCAPGQ9BPX3 1015 aa11.83□□□□□ -0.52
CBWD3-206ENST00000478048 OSBPL2Q9H1P3 480 aa11.83□□□□□ -0.52
CBWD3-206ENST00000478048 TRPV5Q9NQA5 729 aa11.83□□□□□ -0.52
CBWD3-206ENST00000478048 KLHL11Q9NVR0 708 aa11.83□□□□□ -0.52
CBWD3-206ENST00000478048 STIM2Q9P246 746 aa11.83□□□□□ -0.52
CBWD3-206ENST00000478048 SHISA7A6NL88 538 aa11.82□□□□□ -0.52
CBWD3-206ENST00000478048 E9PAM4 449 aa11.82□□□□□ -0.52
CBWD3-206ENST00000478048 TRIM24O15164 1050 aa11.82□□□□□ -0.52
CBWD3-206ENST00000478048 SPOPO43791 374 aa11.82□□□□□ -0.52
CBWD3-206ENST00000478048 TBL1XO60907 577 aa11.82□□□□□ -0.52
CBWD3-206ENST00000478048 CNTN5O94779 1100 aa11.82□□□□□ -0.52
CBWD3-206ENST00000478048 LRIG2O94898 1065 aa11.82□□□□□ -0.52
CBWD3-206ENST00000478048 ADH1CP00326 375 aa11.82□□□□□ -0.52
CBWD3-206ENST00000478048 PENKP01210 267 aaPredicted RBP11.82□□□□□ -0.52
CBWD3-206ENST00000478048 TYRP14679 529 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms