RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 MBLAC2Q68D91 279 aa8.59□□□□□ -1.03
ERCC8-205ENST00000477893 DPY19L2P1Q6NXN4 242 aa8.59□□□□□ -1.03
ERCC8-205ENST00000477893 CAVIN1Q6NZI2 390 aaKnown RBP8.59□□□□□ -1.03
ERCC8-205ENST00000477893 RBM43Q6ZSC3 357 aaKnown RBP8.59□□□□□ -1.03
ERCC8-205ENST00000477893 TMEM110Q86TL2 294 aa8.59□□□□□ -1.03
ERCC8-205ENST00000477893 NOP9Q86U38 636 aaKnown RBP8.59□□□□□ -1.03
ERCC8-205ENST00000477893 FAM71AQ8IYT1 594 aa8.59□□□□□ -1.03
ERCC8-205ENST00000477893 HJURPQ8NCD3 748 aaPredicted RBP8.59□□□□□ -1.03
ERCC8-205ENST00000477893 ANKRD20A12PQ8NF67 263 aa8.59□□□□□ -1.03
ERCC8-205ENST00000477893 OLIG1Q8TAK6 271 aa8.59□□□□□ -1.03
ERCC8-205ENST00000477893 KCNV2Q8TDN2 545 aa8.59□□□□□ -1.03
ERCC8-205ENST00000477893 STK32AQ8WU08 396 aa8.59□□□□□ -1.03
ERCC8-205ENST00000477893 SLC20A1Q8WUM9 679 aa8.59□□□□□ -1.03
ERCC8-205ENST00000477893 LOXL4Q96JB6 756 aa8.59□□□□□ -1.03
ERCC8-205ENST00000477893 ZC3H10Q96K80 434 aaKnown RBP8.59□□□□□ -1.03
ERCC8-205ENST00000477893 EDEM2Q9BV94 578 aa8.59□□□□□ -1.03
ERCC8-205ENST00000477893 TRIM62Q9BVG3 475 aa8.59□□□□□ -1.03
ERCC8-205ENST00000477893 GANQ9H2C0 597 aa8.59□□□□□ -1.03
ERCC8-205ENST00000477893 MTG2Q9H4K7 406 aa8.59□□□□□ -1.03
ERCC8-205ENST00000477893 FSCN3Q9NQT6 498 aa8.59□□□□□ -1.03
ERCC8-205ENST00000477893 VPS45Q9NRW7 570 aa8.59□□□□□ -1.03
ERCC8-205ENST00000477893 TMEM63CQ9P1W3 806 aa8.59□□□□□ -1.03
ERCC8-205ENST00000477893 THAP10Q9P2Z0 257 aaPredicted RBP8.59□□□□□ -1.03
ERCC8-205ENST00000477893 FBXO10Q9UK96 956 aa8.59□□□□□ -1.03
ERCC8-205ENST00000477893 PCDHGC3Q9UN70 934 aa8.59□□□□□ -1.03
ERCC8-205ENST00000477893 TLR6Q9Y2C9 796 aa8.59□□□□□ -1.03
ERCC8-205ENST00000477893 IGHV1OR15-9A0A0B4J2B8 117 aa8.58□□□□□ -1.04
ERCC8-205ENST00000477893 MED19A0JLT2 244 aaPredicted RBP8.58□□□□□ -1.04
ERCC8-205ENST00000477893 BCLAF3A2AJT9 711 aaKnown RBP8.58□□□□□ -1.04
ERCC8-205ENST00000477893 H0Y626 953 aa8.58□□□□□ -1.04
ERCC8-205ENST00000477893 HSF2BPO75031 334 aa8.58□□□□□ -1.04
ERCC8-205ENST00000477893 NDUFS2O75306 463 aa8.58□□□□□ -1.04
ERCC8-205ENST00000477893 DAB1O75553 588 aa8.58□□□□□ -1.04
ERCC8-205ENST00000477893 CFIP05156 583 aa8.58□□□□□ -1.04
ERCC8-205ENST00000477893 MMEP08473 750 aa8.58□□□□□ -1.04
ERCC8-205ENST00000477893 ZNF806P0C7X5 589 aa8.58□□□□□ -1.04
ERCC8-205ENST00000477893 TACR2P21452 398 aa8.58□□□□□ -1.04
ERCC8-205ENST00000477893 ITPKAP23677 461 aa8.58□□□□□ -1.04
ERCC8-205ENST00000477893 GMPRP36959 345 aa8.58□□□□□ -1.04
ERCC8-205ENST00000477893 SULT1E1P49888 294 aa8.58□□□□□ -1.04
ERCC8-205ENST00000477893 BPIFB4P59827 614 aa8.58□□□□□ -1.04
ERCC8-205ENST00000477893 ZNF445P59923 1031 aa8.58□□□□□ -1.04
ERCC8-205ENST00000477893 SLC6A3Q01959 620 aa8.58□□□□□ -1.04
ERCC8-205ENST00000477893 CENPCQ03188 943 aa8.58□□□□□ -1.04
ERCC8-205ENST00000477893 UBXN1Q04323 297 aa8.58□□□□□ -1.04
ERCC8-205ENST00000477893 RING1Q06587 406 aa8.58□□□□□ -1.04
ERCC8-205ENST00000477893 LMAN2Q12907 356 aa8.58□□□□□ -1.04
ERCC8-205ENST00000477893 BYSLQ13895 437 aaKnown RBP8.58□□□□□ -1.04
ERCC8-205ENST00000477893 EIF4HQ15056 248 aaKnown RBP8.58□□□□□ -1.04
ERCC8-205ENST00000477893 SYCP1Q15431 976 aa8.58□□□□□ -1.04
ERCC8-205ENST00000477893 MS4A13Q5J8X5 152 aa8.58□□□□□ -1.04
ERCC8-205ENST00000477893 FAM102AQ5T9C2 384 aaPredicted RBP8.58□□□□□ -1.04
ERCC8-205ENST00000477893 NAA35Q5VZE5 725 aa8.58□□□□□ -1.04
ERCC8-205ENST00000477893 LYSMD4Q5XG99 296 aa8.58□□□□□ -1.04
ERCC8-205ENST00000477893 OLFML1Q6UWY5 402 aa8.58□□□□□ -1.04
ERCC8-205ENST00000477893 FAM124AQ86V42 546 aa8.58□□□□□ -1.04
ERCC8-205ENST00000477893 C11orf74Q86VG3 221 aa8.58□□□□□ -1.04
ERCC8-205ENST00000477893 CCDC117Q8IWD4 279 aaPredicted RBP8.58□□□□□ -1.04
ERCC8-205ENST00000477893 AHI1Q8N157 1196 aa8.58□□□□□ -1.04
ERCC8-205ENST00000477893 ZSCAN1Q8NBB4 408 aa8.58□□□□□ -1.04
ERCC8-205ENST00000477893 TMEM35BQ8NCS4 154 aa8.58□□□□□ -1.04
ERCC8-205ENST00000477893 NETO1Q8TDF5 533 aa8.58□□□□□ -1.04
ERCC8-205ENST00000477893 WFIKKN2Q8TEU8 576 aa8.58□□□□□ -1.04
ERCC8-205ENST00000477893 CPA5Q8WXQ8 436 aa8.58□□□□□ -1.04
ERCC8-205ENST00000477893 SLC39A13Q96H72 371 aa8.58□□□□□ -1.04
ERCC8-205ENST00000477893 MRGPRX1Q96LB2 322 aa8.58□□□□□ -1.04
ERCC8-205ENST00000477893 SLC2A13Q96QE2 648 aa8.58□□□□□ -1.04
ERCC8-205ENST00000477893 SPAG5Q96R06 1193 aa8.58□□□□□ -1.04
ERCC8-205ENST00000477893 DDX50Q9BQ39 737 aaKnown RBP8.58□□□□□ -1.04
ERCC8-205ENST00000477893 NAA15Q9BXJ9 866 aaKnown RBP8.58□□□□□ -1.04
ERCC8-205ENST00000477893 STK33Q9BYT3 514 aa8.58□□□□□ -1.04
ERCC8-205ENST00000477893 SLC2A11Q9BYW1 496 aa8.58□□□□□ -1.04
ERCC8-205ENST00000477893 MKRN2Q9H000 416 aaKnown RBP8.58□□□□□ -1.04
ERCC8-205ENST00000477893 PRDM16Q9HAZ2 1276 aa8.58□□□□□ -1.04
ERCC8-205ENST00000477893 SEPT11Q9NVA2 429 aaKnown RBP8.58□□□□□ -1.04
ERCC8-205ENST00000477893 DLL3Q9NYJ7 618 aa8.58□□□□□ -1.04
ERCC8-205ENST00000477893 STOML2Q9UJZ1 356 aa8.58□□□□□ -1.04
ERCC8-205ENST00000477893 PCDHGA5Q9Y5G8 931 aa8.58□□□□□ -1.04
ERCC8-205ENST00000477893 SNX10Q9Y5X0 201 aa8.58□□□□□ -1.04
ERCC8-205ENST00000477893 MEI4A8MW99 385 aa8.57□□□□□ -1.04
ERCC8-205ENST00000477893 F5H5T6 163 aa8.57□□□□□ -1.04
ERCC8-205ENST00000477893 J3QL48 77 aa8.57□□□□□ -1.04
ERCC8-205ENST00000477893 M0QYT0 321 aa8.57□□□□□ -1.04
ERCC8-205ENST00000477893 GFRA2O00451 464 aa8.57□□□□□ -1.04
ERCC8-205ENST00000477893 AP5Z1O43299 807 aa8.57□□□□□ -1.04
ERCC8-205ENST00000477893 LUC7L3O95232 432 aaKnown RBP8.57□□□□□ -1.04
ERCC8-205ENST00000477893 GJB6O95452 261 aa8.57□□□□□ -1.04
ERCC8-205ENST00000477893 ACADMP11310 421 aa8.57□□□□□ -1.04
ERCC8-205ENST00000477893 ATP1A3P13637 1013 aa8.57□□□□□ -1.04
ERCC8-205ENST00000477893 POLR2EP19388 210 aaKnown RBP8.57□□□□□ -1.04
ERCC8-205ENST00000477893 TFE3P19532 575 aaPredicted RBP8.57□□□□□ -1.04
ERCC8-205ENST00000477893 ABCB4P21439 1286 aa8.57□□□□□ -1.04
ERCC8-205ENST00000477893 LORP23490 312 aaPredicted RBP8.57□□□□□ -1.04
ERCC8-205ENST00000477893 CSKP41240 450 aa8.57□□□□□ -1.04
ERCC8-205ENST00000477893 CTSOP43234 321 aaPredicted RBP8.57□□□□□ -1.04
ERCC8-205ENST00000477893 MAPK8P45983 427 aa8.57□□□□□ -1.04
ERCC8-205ENST00000477893 NNTQ13423 1086 aa8.57□□□□□ -1.04
ERCC8-205ENST00000477893 UAP1L1Q3KQV9 507 aa8.57□□□□□ -1.04
ERCC8-205ENST00000477893 TRIM61Q5EBN2 209 aa8.57□□□□□ -1.04
ERCC8-205ENST00000477893 FSCBQ5H9T9 825 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms