RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 ZC3H18Q86VM9 953 aaKnown RBP12.49□□□□□ -0.41
PRPF39-203ENST00000477626 SH2D3CQ8N5H7 860 aa12.49□□□□□ -0.41
PRPF39-203ENST00000477626 WBP2Q969T9 261 aa12.49□□□□□ -0.41
PRPF39-203ENST00000477626 OXNAD1Q96HP4 312 aaPredicted RBP12.49□□□□□ -0.41
PRPF39-203ENST00000477626 TSPYL1Q9H0U9 437 aa12.49□□□□□ -0.41
PRPF39-203ENST00000477626 WDCPQ9H6R7 721 aa12.49□□□□□ -0.41
PRPF39-203ENST00000477626 PAK5Q9P286 719 aa12.49□□□□□ -0.41
PRPF39-203ENST00000477626 ASIC3Q9UHC3 531 aa12.49□□□□□ -0.41
PRPF39-203ENST00000477626 HMGB1P1B2RPK0 211 aaPredicted RBP12.49□□□□□ -0.41
PRPF39-203ENST00000477626 H3BRJ5 948 aa12.49□□□□□ -0.41
PRPF39-203ENST00000477626 SGK1O00141 431 aa12.49□□□□□ -0.41
PRPF39-203ENST00000477626 EEF2KO00418 725 aaKnown RBP12.49□□□□□ -0.41
PRPF39-203ENST00000477626 F11P03951 625 aa12.49□□□□□ -0.41
PRPF39-203ENST00000477626 HLTFQ14527 1009 aaKnown RBP eCLIP12.49□□□□□ -0.41
PRPF39-203ENST00000477626 PPP6R3Q5H9R7 873 aaPredicted RBP12.49□□□□□ -0.41
PRPF39-203ENST00000477626 NECAB2Q7Z6G3 386 aa12.49□□□□□ -0.41
PRPF39-203ENST00000477626 ATXN2LQ8WWM7 1075 aaKnown RBP12.49□□□□□ -0.41
PRPF39-203ENST00000477626 FAM149B1Q96BN6 582 aa12.49□□□□□ -0.41
PRPF39-203ENST00000477626 RBM15Q96T37 977 aaKnown RBP eCLIP12.49□□□□□ -0.41
PRPF39-203ENST00000477626 FAM204AQ9H8W3 233 aa12.49□□□□□ -0.41
PRPF39-203ENST00000477626 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.49□□□□□ -0.41
PRPF39-203ENST00000477626 LRFN2Q9ULH4 789 aa12.49□□□□□ -0.41
PRPF39-203ENST00000477626 HMX2A2RU54 273 aa12.48□□□□□ -0.41
PRPF39-203ENST00000477626 TBX18O95935 607 aa12.48□□□□□ -0.41
PRPF39-203ENST00000477626 MMP2P08253 660 aa12.48□□□□□ -0.41
PRPF39-203ENST00000477626 LAG3P18627 525 aa12.48□□□□□ -0.41
PRPF39-203ENST00000477626 PRKCHP24723 683 aa12.48□□□□□ -0.41
PRPF39-203ENST00000477626 SLC6A4P31645 630 aa12.48□□□□□ -0.41
PRPF39-203ENST00000477626 TAF10Q12962 218 aa12.48□□□□□ -0.41
PRPF39-203ENST00000477626 ANKRD20A2Q5SQ80 823 aa12.48□□□□□ -0.41
PRPF39-203ENST00000477626 CFAP58Q5T655 872 aa12.48□□□□□ -0.41
PRPF39-203ENST00000477626 ANKRD20A1Q5TYW2 823 aa12.48□□□□□ -0.41
PRPF39-203ENST00000477626 ANKRD20A3Q5VUR7 823 aa12.48□□□□□ -0.41
PRPF39-203ENST00000477626 CDKL3Q8IVW4 592 aaPredicted RBP12.48□□□□□ -0.41
PRPF39-203ENST00000477626 DCAKDQ8WVC6 231 aa12.48□□□□□ -0.41
PRPF39-203ENST00000477626 LMLNQ96KR4 655 aa12.48□□□□□ -0.41
PRPF39-203ENST00000477626 NSMCE3Q96MG7 304 aa12.48□□□□□ -0.41
PRPF39-203ENST00000477626 PRICKLE1Q96MT3 831 aaPredicted RBP12.48□□□□□ -0.41
PRPF39-203ENST00000477626 SERPINB11Q96P15 392 aa12.48□□□□□ -0.41
PRPF39-203ENST00000477626 KLF16Q9BXK1 252 aaPredicted RBP12.48□□□□□ -0.41
PRPF39-203ENST00000477626 PRDM12Q9H4Q4 367 aa12.48□□□□□ -0.41
PRPF39-203ENST00000477626 CCSER2Q9H7U1 834 aa12.48□□□□□ -0.41
PRPF39-203ENST00000477626 E9PAM4 449 aa12.48□□□□□ -0.41
PRPF39-203ENST00000477626 ARHGAP18Q8N392 663 aa12.48□□□□□ -0.41
PRPF39-203ENST00000477626 NETO2Q8NC67 525 aa12.48□□□□□ -0.41
PRPF39-203ENST00000477626 CCDC110Q8TBZ0 833 aa12.48□□□□□ -0.41
PRPF39-203ENST00000477626 TFB1MQ8WVM0 346 aaKnown RBP12.48□□□□□ -0.41
PRPF39-203ENST00000477626 IGSF8Q969P0 613 aa12.48□□□□□ -0.41
PRPF39-203ENST00000477626 FAM193BQ96PV7 902 aaPredicted RBP12.48□□□□□ -0.41
PRPF39-203ENST00000477626 BRD8Q9H0E9 1235 aa12.48□□□□□ -0.41
PRPF39-203ENST00000477626 ZNF334Q9HCZ1 680 aaPredicted RBP12.48□□□□□ -0.41
PRPF39-203ENST00000477626 LCHNA4D1U4 455 aa12.48□□□□□ -0.41
PRPF39-203ENST00000477626 KCNN4O15554 427 aa12.48□□□□□ -0.41
PRPF39-203ENST00000477626 MAP3K6O95382 1288 aa12.48□□□□□ -0.41
PRPF39-203ENST00000477626 KLKB1P03952 638 aa12.48□□□□□ -0.41
PRPF39-203ENST00000477626 CETN2P41208 172 aa12.48□□□□□ -0.41
PRPF39-203ENST00000477626 KYNUQ16719 465 aa12.48□□□□□ -0.41
PRPF39-203ENST00000477626 ABI1Q8IZP0 508 aa12.48□□□□□ -0.41
PRPF39-203ENST00000477626 RTL3Q8N8U3 475 aaKnown RBP12.48□□□□□ -0.41
PRPF39-203ENST00000477626 CCDC134Q9H6E4 229 aa12.48□□□□□ -0.41
PRPF39-203ENST00000477626 SMYD2Q9NRG4 433 aa12.48□□□□□ -0.41
PRPF39-203ENST00000477626 MOCS1Q9NZB8 636 aa12.48□□□□□ -0.41
PRPF39-203ENST00000477626 LZTS1Q9Y250 596 aa12.48□□□□□ -0.41
PRPF39-203ENST00000477626 SRRM3A6NNA2 597 aaPredicted RBP12.47□□□□□ -0.41
PRPF39-203ENST00000477626 ACRP10323 421 aa12.47□□□□□ -0.41
PRPF39-203ENST00000477626 CTSAP10619 480 aa12.47□□□□□ -0.41
PRPF39-203ENST00000477626 YWHAQP27348 245 aa12.47□□□□□ -0.41
PRPF39-203ENST00000477626 GRIA1P42261 906 aa12.47□□□□□ -0.41
PRPF39-203ENST00000477626 EPHA5P54756 1037 aa12.47□□□□□ -0.41
PRPF39-203ENST00000477626 MPP2Q14168 576 aa12.47□□□□□ -0.41
PRPF39-203ENST00000477626 DENND5AQ6IQ26 1287 aa12.47□□□□□ -0.41
PRPF39-203ENST00000477626 ZNF365Q70YC5 407 aa12.47□□□□□ -0.41
PRPF39-203ENST00000477626 OR52K2Q8NGK3 314 aa12.47□□□□□ -0.41
PRPF39-203ENST00000477626 PSMG2Q969U7 264 aa12.47□□□□□ -0.41
PRPF39-203ENST00000477626 TMEM106CQ9BVX2 250 aa12.47□□□□□ -0.41
PRPF39-203ENST00000477626 RETREG1Q9H6L5 497 aa12.47□□□□□ -0.41
PRPF39-203ENST00000477626 KIAA0100Q14667 2235 aaKnown RBP12.47□□□□□ -0.41
PRPF39-203ENST00000477626 FGF10O15520 208 aaPredicted RBP12.47□□□□□ -0.41
PRPF39-203ENST00000477626 MLNP12872 115 aa12.47□□□□□ -0.41
PRPF39-203ENST00000477626 CCR1P32246 355 aa12.47□□□□□ -0.41
PRPF39-203ENST00000477626 KCNC3Q14003 757 aa12.47□□□□□ -0.41
PRPF39-203ENST00000477626 EXOC3L1Q86VI1 746 aa12.47□□□□□ -0.41
PRPF39-203ENST00000477626 MPP5Q8N3R9 675 aa12.47□□□□□ -0.41
PRPF39-203ENST00000477626 RNF38Q9H0F5 515 aa12.47□□□□□ -0.41
PRPF39-203ENST00000477626 CARNS1A5YM72 827 aa12.46□□□□□ -0.41
PRPF39-203ENST00000477626 NDC80O14777 642 aa12.46□□□□□ -0.41
PRPF39-203ENST00000477626 NCAM2O15394 837 aa12.46□□□□□ -0.41
PRPF39-203ENST00000477626 OPHN1O60890 802 aa12.46□□□□□ -0.41
PRPF39-203ENST00000477626 AVILO75366 819 aa12.46□□□□□ -0.41
PRPF39-203ENST00000477626 PSMA3P25788 255 aa12.46□□□□□ -0.41
PRPF39-203ENST00000477626 CCDC13Q8IYE1 715 aa12.46□□□□□ -0.41
PRPF39-203ENST00000477626 ZNF558Q96NG5 402 aa12.46□□□□□ -0.41
PRPF39-203ENST00000477626 GBA3Q9H227 469 aa12.46□□□□□ -0.41
PRPF39-203ENST00000477626 CTNNAL1Q9UBT7 734 aa12.46□□□□□ -0.41
PRPF39-203ENST00000477626 MTRF1LQ9UGC7 380 aaKnown RBP12.46□□□□□ -0.41
PRPF39-203ENST00000477626 YIPF1Q9Y548 306 aa12.46□□□□□ -0.41
PRPF39-203ENST00000477626 COCHO43405 550 aa12.46□□□□□ -0.41
PRPF39-203ENST00000477626 MOSPD3O75425 235 aa12.46□□□□□ -0.41
PRPF39-203ENST00000477626 OR1D2P34982 312 aa12.46□□□□□ -0.41
PRPF39-203ENST00000477626 SLC18A1P54219 525 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms