RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 TMEM63BQ5T3F8 832 aa4.88□□□□□ -1.63
PTCD3-212ENST00000477520 CCNJQ5T5M9 372 aa4.88□□□□□ -1.63
PTCD3-212ENST00000477520 HLA-DQA1Q5Y7H0 255 aa4.88□□□□□ -1.63
PTCD3-212ENST00000477520 CENPPQ6IPU0 288 aa4.88□□□□□ -1.63
PTCD3-212ENST00000477520 TTC27Q6P3X3 843 aa4.88□□□□□ -1.63
PTCD3-212ENST00000477520 CRIP3Q6Q6R5 217 aa4.88□□□□□ -1.63
PTCD3-212ENST00000477520 VSTM1Q6UX27 236 aa4.88□□□□□ -1.63
PTCD3-212ENST00000477520 RBM44Q6ZP01 1051 aaKnown RBP4.88□□□□□ -1.63
PTCD3-212ENST00000477520 RRAGAQ7L523 313 aa4.88□□□□□ -1.63
PTCD3-212ENST00000477520 EPM2AIP1Q7L775 607 aaPredicted RBP4.88□□□□□ -1.63
PTCD3-212ENST00000477520 CLNKQ7Z7G1 428 aa4.88□□□□□ -1.63
PTCD3-212ENST00000477520 ZNF410Q86VK4 478 aa4.88□□□□□ -1.63
PTCD3-212ENST00000477520 JAMLQ86YT9 394 aa4.88□□□□□ -1.63
PTCD3-212ENST00000477520 RTKN2Q8IZC4 609 aa4.88□□□□□ -1.63
PTCD3-212ENST00000477520 METTL13Q8N6R0 699 aa4.88□□□□□ -1.63
PTCD3-212ENST00000477520 NAT16Q8N8M0 369 aa4.88□□□□□ -1.63
PTCD3-212ENST00000477520 LRRC57Q8N9N7 239 aa4.88□□□□□ -1.63
PTCD3-212ENST00000477520 PDPRQ8NCN5 879 aa4.88□□□□□ -1.63
PTCD3-212ENST00000477520 RBM15BQ8NDT2 890 aaKnown RBP4.88□□□□□ -1.63
PTCD3-212ENST00000477520 SLC17A8Q8NDX2 589 aa4.88□□□□□ -1.63
PTCD3-212ENST00000477520 OR7G1Q8NGA0 311 aa4.88□□□□□ -1.63
PTCD3-212ENST00000477520 CEP70Q8NHQ1 597 aa4.88□□□□□ -1.63
PTCD3-212ENST00000477520 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.88□□□□□ -1.63
PTCD3-212ENST00000477520 TTC8Q8TAM2 541 aa4.88□□□□□ -1.63
PTCD3-212ENST00000477520 ZNF420Q8TAQ5 688 aaPredicted RBP4.88□□□□□ -1.63
PTCD3-212ENST00000477520 ADAMTS17Q8TE56 1095 aa4.88□□□□□ -1.63
PTCD3-212ENST00000477520 SH3RF3Q8TEJ3 882 aaPredicted RBP4.88□□□□□ -1.63
PTCD3-212ENST00000477520 FAM172AQ8WUF8 416 aa4.88□□□□□ -1.63
PTCD3-212ENST00000477520 C10orf82Q8WW14 230 aa4.88□□□□□ -1.63
PTCD3-212ENST00000477520 NRG4Q8WWG1 115 aa4.88□□□□□ -1.63
PTCD3-212ENST00000477520 APPBP2Q92624 585 aa4.88□□□□□ -1.63
PTCD3-212ENST00000477520 ALG3Q92685 438 aa4.88□□□□□ -1.63
PTCD3-212ENST00000477520 DPF3Q92784 378 aa4.88□□□□□ -1.63
PTCD3-212ENST00000477520 ART4Q93070 314 aa4.88□□□□□ -1.63
PTCD3-212ENST00000477520 TRIM63Q969Q1 353 aa4.88□□□□□ -1.63
PTCD3-212ENST00000477520 NMD3Q96D46 503 aaKnown RBP4.88□□□□□ -1.63
PTCD3-212ENST00000477520 HES6Q96HZ4 224 aa4.88□□□□□ -1.63
PTCD3-212ENST00000477520 DYDC2Q96IM9 177 aa4.88□□□□□ -1.63
PTCD3-212ENST00000477520 CNOT6LQ96LI5 555 aaKnown RBP4.88□□□□□ -1.63
PTCD3-212ENST00000477520 TSG101Q99816 390 aa4.88□□□□□ -1.63
PTCD3-212ENST00000477520 PSD2Q9BQI7 771 aa4.88□□□□□ -1.63
PTCD3-212ENST00000477520 RSRP1Q9BUV0 290 aa4.88□□□□□ -1.63
PTCD3-212ENST00000477520 CADM1Q9BY67 442 aaKnown RBP4.88□□□□□ -1.63
PTCD3-212ENST00000477520 NDEL1Q9GZM8 345 aa4.88□□□□□ -1.63
PTCD3-212ENST00000477520 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.88□□□□□ -1.636e-13■■■□□ 17.1
PTCD3-212ENST00000477520 VPS11Q9H270 941 aa4.88□□□□□ -1.63
PTCD3-212ENST00000477520 FAM96AQ9H5X1 160 aa4.88□□□□□ -1.63
PTCD3-212ENST00000477520 KCNK9Q9NPC2 374 aa4.88□□□□□ -1.63
PTCD3-212ENST00000477520 CLIC5Q9NZA1 410 aa4.88□□□□□ -1.63
PTCD3-212ENST00000477520 SUCOQ9UBS9 1254 aaKnown RBP4.88□□□□□ -1.63
PTCD3-212ENST00000477520 SEL1LQ9UBV2 794 aa4.88□□□□□ -1.63
PTCD3-212ENST00000477520 ZMAT5Q9UDW3 170 aaKnown RBP4.88□□□□□ -1.63
PTCD3-212ENST00000477520 AMACRQ9UHK6 382 aa4.88□□□□□ -1.63
PTCD3-212ENST00000477520 PTBP2Q9UKA9 531 aaKnown RBP4.88□□□□□ -1.63
PTCD3-212ENST00000477520 CDH7Q9ULB5 785 aa4.88□□□□□ -1.63
PTCD3-212ENST00000477520 ERVK-11Q9UQG0 969 aa4.88□□□□□ -1.63
PTCD3-212ENST00000477520 ANGPTL3Q9Y5C1 460 aa4.88□□□□□ -1.63
PTCD3-212ENST00000477520 SLC12A7Q9Y666 1083 aa4.88□□□□□ -1.63
PTCD3-212ENST00000477520 XDHP47989 1333 aa4.88□□□□□ -1.63
PTCD3-212ENST00000477520 TNRC6CQ9HCJ0 1690 aaKnown RBP4.87□□□□□ -1.63
PTCD3-212ENST00000477520 DLEC1Q9Y238 1755 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 CCDC160A6NGH7 325 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 UNCXA6NJT0 531 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 LRRC53A6NM62 1247 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 RSPH10B2B2RC85 870 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 TM9SF1O15321 606 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 SLC26A4O43511 780 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 NCK2O43639 380 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 BUB1O43683 1085 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 ITM2AO43736 263 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 DTNBO60941 627 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 ZC3H11AO75152 810 aaKnown RBP eCLIP4.87□□□□□ -1.63
PTCD3-212ENST00000477520 IDH1O75874 414 aaKnown RBP4.87□□□□□ -1.63
PTCD3-212ENST00000477520 KRT36O76013 467 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 OXSR1O95747 527 aaPredicted RBP4.87□□□□□ -1.63
PTCD3-212ENST00000477520 TTC4O95801 387 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 NTRK1P04629 796 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 TFAP2AP05549 437 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 IFIT1P09914 478 aaKnown RBP4.87□□□□□ -1.63
PTCD3-212ENST00000477520 H2AFZP0C0S5 128 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 RSPH10BP0C881 870 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 RARBP10826 455 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 PCP11498 1178 aaKnown RBP4.87□□□□□ -1.63
PTCD3-212ENST00000477520 PABPC1P11940 636 aaKnown RBP4.87□□□□□ -1.63
PTCD3-212ENST00000477520 ZNF23P17027 643 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 KLRC1P26715 233 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 CALML3P27482 149 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 PRDX6P30041 224 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 PRKCIP41743 596 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 SLC1A4P43007 532 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 RFX5P48382 616 aaPredicted RBP4.87□□□□□ -1.63
PTCD3-212ENST00000477520 DAB2P98082 770 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 DMPKQ09013 629 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 MGAT5Q09328 741 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 KLHL30Q0D2K2 578 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 TRPC3Q13507 836 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 UBE4AQ14139 1066 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 E2F2Q14209 437 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 NR1D2Q14995 579 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 TGFBIQ15582 683 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms