RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 ZNF597Q96LX8 424 aa15.64■□□□□ 0.09
CLSTN1-205ENST00000477264 COPS7BQ9H9Q2 264 aaPredicted RBP15.64■□□□□ 0.09
CLSTN1-205ENST00000477264 PFDN4Q9NQP4 134 aa15.64■□□□□ 0.09
CLSTN1-205ENST00000477264 EMCNQ9ULC0 261 aa15.64■□□□□ 0.09
CLSTN1-205ENST00000477264 PCDHA11Q9Y5I1 949 aa15.64■□□□□ 0.09
CLSTN1-205ENST00000477264 CCDC162PA2VCL2 907 aa15.63■□□□□ 0.09
CLSTN1-205ENST00000477264 SLC15A5A6NIM6 579 aa15.63■□□□□ 0.09
CLSTN1-205ENST00000477264 H3BNH8 94 aa15.63■□□□□ 0.09
CLSTN1-205ENST00000477264 DCXO43602 365 aa15.63■□□□□ 0.09
CLSTN1-205ENST00000477264 H2AFYO75367 372 aaKnown RBP15.63■□□□□ 0.09
CLSTN1-205ENST00000477264 SERPINB7O75635 380 aa15.63■□□□□ 0.09
CLSTN1-205ENST00000477264 TRPA1O75762 1119 aa15.63■□□□□ 0.09
CLSTN1-205ENST00000477264 BCAS2O75934 225 aaPredicted RBP15.63■□□□□ 0.09
CLSTN1-205ENST00000477264 ITGBL1O95965 494 aaPredicted RBP15.63■□□□□ 0.09
CLSTN1-205ENST00000477264 MX2P20592 715 aa15.63■□□□□ 0.09
CLSTN1-205ENST00000477264 ESRRGP62508 458 aa15.63■□□□□ 0.09
CLSTN1-205ENST00000477264 RELAQ04206 551 aa15.63■□□□□ 0.09
CLSTN1-205ENST00000477264 RFTN1Q14699 578 aaPredicted RBP15.63■□□□□ 0.09
CLSTN1-205ENST00000477264 ZNF423Q2M1K9 1284 aa15.63■□□□□ 0.09
CLSTN1-205ENST00000477264 SMTNL2Q2TAL5 461 aa15.63■□□□□ 0.09
CLSTN1-205ENST00000477264 N4BP2L1Q5TBK1 243 aaPredicted RBP15.63■□□□□ 0.09
CLSTN1-205ENST00000477264 MROH9Q5TGP6 573 aa15.63■□□□□ 0.09
CLSTN1-205ENST00000477264 CST9Q5W186 159 aa15.63■□□□□ 0.09
CLSTN1-205ENST00000477264 RSPH3Q86UC2 560 aa15.63■□□□□ 0.09
CLSTN1-205ENST00000477264 VSIG10LQ86VR7 867 aa15.63■□□□□ 0.09
CLSTN1-205ENST00000477264 PGAM4Q8N0Y7 254 aa15.63■□□□□ 0.09
CLSTN1-205ENST00000477264 DNERQ8NFT8 737 aa15.63■□□□□ 0.09
CLSTN1-205ENST00000477264 GIPC3Q8TF64 312 aa15.63■□□□□ 0.09
CLSTN1-205ENST00000477264 KCNN1Q92952 543 aa15.63■□□□□ 0.09
CLSTN1-205ENST00000477264 MS4A4AQ96JQ5 239 aa15.63■□□□□ 0.09
CLSTN1-205ENST00000477264 KIFC3Q9BVG8 833 aa15.63■□□□□ 0.09
CLSTN1-205ENST00000477264 PLAC1Q9HBJ0 212 aa15.63■□□□□ 0.09
CLSTN1-205ENST00000477264 RBPJLQ9UBG7 517 aa15.63■□□□□ 0.09
CLSTN1-205ENST00000477264 TCEAL9Q9UHQ7 104 aa15.63■□□□□ 0.09
CLSTN1-205ENST00000477264 PCDHGB4Q9UN71 923 aa15.63■□□□□ 0.09
CLSTN1-205ENST00000477264 PCDHB12Q9Y5F1 795 aa15.63■□□□□ 0.09
CLSTN1-205ENST00000477264 PCDHGB5Q9Y5G0 923 aa15.63■□□□□ 0.09
CLSTN1-205ENST00000477264 HMX2A2RU54 273 aa15.63■□□□□ 0.09
CLSTN1-205ENST00000477264 TMEM114B3SHH9 223 aa15.63■□□□□ 0.09
CLSTN1-205ENST00000477264 IL1R2P27930 398 aa15.63■□□□□ 0.09
CLSTN1-205ENST00000477264 SSTR3P32745 418 aaPredicted RBP15.63■□□□□ 0.09
CLSTN1-205ENST00000477264 LIG4P49917 911 aa15.63■□□□□ 0.09
CLSTN1-205ENST00000477264 NUDT2P50583 147 aa15.63■□□□□ 0.09
CLSTN1-205ENST00000477264 HUNKP57058 714 aa15.63■□□□□ 0.09
CLSTN1-205ENST00000477264 C16orf72Q14CZ0 275 aa15.63■□□□□ 0.09
CLSTN1-205ENST00000477264 EPGNQ6UW88 154 aa15.63■□□□□ 0.09
CLSTN1-205ENST00000477264 CAND1Q86VP6 1230 aaKnown RBP15.63■□□□□ 0.09
CLSTN1-205ENST00000477264 CARM1Q86X55 608 aa15.63■□□□□ 0.09
CLSTN1-205ENST00000477264 RP9Q8TA86 221 aaKnown RBP15.63■□□□□ 0.09
CLSTN1-205ENST00000477264 PDCD6IPQ8WUM4 868 aaKnown RBP15.63■□□□□ 0.09
CLSTN1-205ENST00000477264 SREK1Q8WXA9 508 aaKnown RBP15.63■□□□□ 0.09
CLSTN1-205ENST00000477264 SLC7A3Q8WY07 619 aa15.63■□□□□ 0.09
CLSTN1-205ENST00000477264 RMND5BQ96G75 393 aaPredicted RBP15.63■□□□□ 0.09
CLSTN1-205ENST00000477264 HNRNPABQ99729 332 aaKnown RBP15.63■□□□□ 0.09
CLSTN1-205ENST00000477264 EBNA1BP2Q99848 306 aaKnown RBP15.63■□□□□ 0.09
CLSTN1-205ENST00000477264 CCDC68Q9H2F9 335 aa15.63■□□□□ 0.09
CLSTN1-205ENST00000477264 MRPL40Q9NQ50 206 aaKnown RBP15.63■□□□□ 0.09
CLSTN1-205ENST00000477264 INIPQ9NRY2 104 aa15.63■□□□□ 0.09
CLSTN1-205ENST00000477264 HACD3Q9P035 362 aa15.63■□□□□ 0.09
CLSTN1-205ENST00000477264 PKD2L1Q9P0L9 805 aa15.63■□□□□ 0.09
CLSTN1-205ENST00000477264 SLC45A1Q9Y2W3 748 aa15.63■□□□□ 0.09
CLSTN1-205ENST00000477264 STYXL1Q9Y6J8 313 aa15.63■□□□□ 0.09
CLSTN1-205ENST00000477264 TANC1Q9C0D5 1861 aa15.63■□□□□ 0.09
CLSTN1-205ENST00000477264 ARHGEF37A1IGU5 675 aa15.62■□□□□ 0.09
CLSTN1-205ENST00000477264 RGSL1A5PLK6 1076 aa15.62■□□□□ 0.09
CLSTN1-205ENST00000477264 WDR64B1ANS9 1081 aa15.62■□□□□ 0.09
CLSTN1-205ENST00000477264 PDHXO00330 501 aa15.62■□□□□ 0.09
CLSTN1-205ENST00000477264 CNMDO75829 334 aa15.62■□□□□ 0.09
CLSTN1-205ENST00000477264 BAIAP3O94812 1187 aa15.62■□□□□ 0.09
CLSTN1-205ENST00000477264 LDHAP00338 332 aaKnown RBP15.62■□□□□ 0.09
CLSTN1-205ENST00000477264 ALDH2P05091 517 aa15.62■□□□□ 0.09
CLSTN1-205ENST00000477264 THOP1P52888 689 aa15.62■□□□□ 0.09
CLSTN1-205ENST00000477264 AP3M2P53677 418 aa15.62■□□□□ 0.09
CLSTN1-205ENST00000477264 KCTD21Q4G0X4 260 aa15.62■□□□□ 0.09
CLSTN1-205ENST00000477264 SPRYD7Q5W111 196 aa15.62■□□□□ 0.09
CLSTN1-205ENST00000477264 PHTF2Q8N3S3 785 aa15.62■□□□□ 0.09
CLSTN1-205ENST00000477264 TMEM102Q8N9M5 508 aaPredicted RBP15.62■□□□□ 0.09
CLSTN1-205ENST00000477264 MCPH1Q8NEM0 835 aa15.62■□□□□ 0.09
CLSTN1-205ENST00000477264 BSNDQ8WZ55 320 aa15.62■□□□□ 0.09
CLSTN1-205ENST00000477264 RANBP9Q96S59 729 aa15.62■□□□□ 0.09
CLSTN1-205ENST00000477264 FERMT1Q9BQL6 677 aa15.62■□□□□ 0.09
CLSTN1-205ENST00000477264 SHCBP1LQ9BZQ2 653 aa15.62■□□□□ 0.09
CLSTN1-205ENST00000477264 CDH19Q9H159 772 aa15.62■□□□□ 0.09
CLSTN1-205ENST00000477264 PDZD7Q9H5P4 517 aa15.62■□□□□ 0.09
CLSTN1-205ENST00000477264 PNPOQ9NVS9 261 aa15.62■□□□□ 0.09
CLSTN1-205ENST00000477264 EPS15L1Q9UBC2 864 aa15.62■□□□□ 0.09
CLSTN1-205ENST00000477264 PTBP2Q9UKA9 531 aaKnown RBP15.62■□□□□ 0.09
CLSTN1-205ENST00000477264 SLC8A2Q9UPR5 921 aa15.62■□□□□ 0.09
CLSTN1-205ENST00000477264 TDRKHQ9Y2W6 561 aaKnown RBP15.62■□□□□ 0.09
CLSTN1-205ENST00000477264 FADS3Q9Y5Q0 445 aa15.62■□□□□ 0.09
CLSTN1-205ENST00000477264 LOC100653049A0A140TA62 436 aa15.62■□□□□ 0.09
CLSTN1-205ENST00000477264 TRIM64CA6NLI5 447 aa15.62■□□□□ 0.09
CLSTN1-205ENST00000477264 H7C0C1 242 aa15.62■□□□□ 0.09
CLSTN1-205ENST00000477264 MAFGO15525 162 aa15.62■□□□□ 0.09
CLSTN1-205ENST00000477264 ADCY6O43306 1168 aa15.62■□□□□ 0.09
CLSTN1-205ENST00000477264 UGT1A9O60656 530 aa15.62■□□□□ 0.09
CLSTN1-205ENST00000477264 KRT34O76011 436 aa15.62■□□□□ 0.09
CLSTN1-205ENST00000477264 CYP2C8P10632 490 aa15.62■□□□□ 0.09
CLSTN1-205ENST00000477264 KRT3P12035 628 aa15.62■□□□□ 0.09
CLSTN1-205ENST00000477264 TPSB2P20231 275 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms