RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 HPS3Q969F9 1004 aa15.99■□□□□ 0.15
SMG5-204ENST00000476954 EPSTI1Q96J88 318 aa15.99■□□□□ 0.15
SMG5-204ENST00000476954 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.99■□□□□ 0.15
SMG5-204ENST00000476954 MARCH2Q9P0N8 246 aa15.99■□□□□ 0.15
SMG5-204ENST00000476954 TJP2Q9UDY2 1190 aa15.99■□□□□ 0.15
SMG5-204ENST00000476954 ATXN7L1Q9ULK2 861 aaPredicted RBP15.99■□□□□ 0.15
SMG5-204ENST00000476954 FZD4Q9ULV1 537 aa15.99■□□□□ 0.15
SMG5-204ENST00000476954 PCDHA5Q9Y5H7 936 aa15.99■□□□□ 0.15
SMG5-204ENST00000476954 TBC1D3DA0A087WVF3 549 aa15.98■□□□□ 0.15
SMG5-204ENST00000476954 TBC1D3IA0A087WXS9 549 aa15.98■□□□□ 0.15
SMG5-204ENST00000476954 TBC1D3EA0A087X179 549 aa15.98■□□□□ 0.15
SMG5-204ENST00000476954 TBC1D3KA0A087X1G2 549 aa15.98■□□□□ 0.15
SMG5-204ENST00000476954 TBC1D3FA6NER0 549 aaPredicted RBP15.98■□□□□ 0.15
SMG5-204ENST00000476954 TBC1D3LB9A6J9 549 aa15.98■□□□□ 0.15
SMG5-204ENST00000476954 KIAA0391O15091 583 aaKnown RBP15.98■□□□□ 0.15
SMG5-204ENST00000476954 TNFSF15O95150 251 aa15.98■□□□□ 0.15
SMG5-204ENST00000476954 TBC1D3HP0C7X1 549 aa15.98■□□□□ 0.15
SMG5-204ENST00000476954 RALAP11233 206 aa15.98■□□□□ 0.15
SMG5-204ENST00000476954 POLR2EP19388 210 aaKnown RBP15.98■□□□□ 0.15
SMG5-204ENST00000476954 CASP4P49662 377 aa15.98■□□□□ 0.15
SMG5-204ENST00000476954 DUSP3P51452 185 aaPredicted RBP15.98■□□□□ 0.15
SMG5-204ENST00000476954 NDST1P52848 882 aa15.98■□□□□ 0.15
SMG5-204ENST00000476954 PDE4CQ08493 712 aa15.98■□□□□ 0.15
SMG5-204ENST00000476954 PSMD6Q15008 389 aa15.98■□□□□ 0.15
SMG5-204ENST00000476954 SNRNP35Q16560 246 aaKnown RBP15.98■□□□□ 0.15
SMG5-204ENST00000476954 SKIDA1Q1XH10 827 aa15.98■□□□□ 0.15
SMG5-204ENST00000476954 TBC1D3GQ6DHY5 549 aa15.98■□□□□ 0.15
SMG5-204ENST00000476954 TBC1D3CQ6IPX1 549 aa15.98■□□□□ 0.15
SMG5-204ENST00000476954 CRTC1Q6UUV9 634 aa15.98■□□□□ 0.15
SMG5-204ENST00000476954 CLEC14AQ86T13 490 aa15.98■□□□□ 0.15
SMG5-204ENST00000476954 PTRH1Q86Y79 214 aaKnown RBP15.98■□□□□ 0.15
SMG5-204ENST00000476954 TBC1D3Q8IZP1 549 aaPredicted RBP15.98■□□□□ 0.15
SMG5-204ENST00000476954 CRYBG2Q8N1P7 616 aa15.98■□□□□ 0.15
SMG5-204ENST00000476954 ZNF276Q8N554 614 aa15.98■□□□□ 0.15
SMG5-204ENST00000476954 SYAP1Q96A49 352 aaPredicted RBP15.98■□□□□ 0.15
SMG5-204ENST00000476954 ARRDC3Q96B67 414 aa15.98■□□□□ 0.15
SMG5-204ENST00000476954 SGF29Q96ES7 293 aa15.98■□□□□ 0.15
SMG5-204ENST00000476954 EPN3Q9H201 632 aa15.98■□□□□ 0.15
SMG5-204ENST00000476954 CLIC5Q9NZA1 410 aa15.98■□□□□ 0.15
SMG5-204ENST00000476954 SRPK3Q9UPE1 567 aa15.98■□□□□ 0.15
SMG5-204ENST00000476954 PCDHGA8Q9Y5G5 932 aa15.98■□□□□ 0.15
SMG5-204ENST00000476954 LZTS3O60299 673 aaPredicted RBP15.97■□□□□ 0.15
SMG5-204ENST00000476954 NOBOXO60393 691 aa15.97■□□□□ 0.15
SMG5-204ENST00000476954 RNASEH1O60930 286 aaKnown RBP15.97■□□□□ 0.15
SMG5-204ENST00000476954 KRT38O76015 456 aa15.97■□□□□ 0.15
SMG5-204ENST00000476954 ATP5BP06576 529 aaKnown RBP15.97■□□□□ 0.15
SMG5-204ENST00000476954 ATICP31939 592 aa15.97■□□□□ 0.15
SMG5-204ENST00000476954 METAP1P53582 386 aa15.97■□□□□ 0.15
SMG5-204ENST00000476954 CYP24A1Q07973 514 aa15.97■□□□□ 0.15
SMG5-204ENST00000476954 SFSWAPQ12872 951 aaKnown RBP15.97■□□□□ 0.15
SMG5-204ENST00000476954 BMT2Q1RMZ1 405 aa15.97■□□□□ 0.15
SMG5-204ENST00000476954 ZNF699Q32M78 642 aa15.97■□□□□ 0.15
SMG5-204ENST00000476954 HNRNPA1L2Q32P51 320 aaKnown RBP15.97■□□□□ 0.15
SMG5-204ENST00000476954 ZNF667Q5HYK9 610 aa15.97■□□□□ 0.15
SMG5-204ENST00000476954 C9orf64Q5T6V5 341 aa15.97■□□□□ 0.15
SMG5-204ENST00000476954 XKR5Q6UX68 686 aa15.97■□□□□ 0.15
SMG5-204ENST00000476954 SND1Q7KZF4 910 aaKnown RBP eCLIP15.97■□□□□ 0.15
SMG5-204ENST00000476954 CCDC186Q7Z3E2 898 aa15.97■□□□□ 0.15
SMG5-204ENST00000476954 TADA2BQ86TJ2 420 aa15.97■□□□□ 0.15
SMG5-204ENST00000476954 IFI44Q8TCB0 444 aa15.97■□□□□ 0.15
SMG5-204ENST00000476954 MRGPRX3Q96LB0 322 aa15.97■□□□□ 0.15
SMG5-204ENST00000476954 TWNKQ96RR1 684 aa15.97■□□□□ 0.15
SMG5-204ENST00000476954 FAM129BQ96TA1 746 aa15.97■□□□□ 0.15
SMG5-204ENST00000476954 MYOCQ99972 504 aa15.97■□□□□ 0.15
SMG5-204ENST00000476954 SEMA3CQ99985 751 aa15.97■□□□□ 0.15
SMG5-204ENST00000476954 CYTH4Q9UIA0 394 aa15.97■□□□□ 0.15
SMG5-204ENST00000476954 ENO4A6NNW6 628 aa15.96■□□□□ 0.15
SMG5-204ENST00000476954 TTC34A8MYJ7 566 aa15.96■□□□□ 0.15
SMG5-204ENST00000476954 PHACTR2O75167 634 aa15.96■□□□□ 0.15
SMG5-204ENST00000476954 NEBLO76041 1014 aa15.96■□□□□ 0.15
SMG5-204ENST00000476954 KIF20AO95235 890 aa15.96■□□□□ 0.15
SMG5-204ENST00000476954 GJB6O95452 261 aa15.96■□□□□ 0.15
SMG5-204ENST00000476954 ITGB2P05107 769 aa15.96■□□□□ 0.15
SMG5-204ENST00000476954 GP1BAP07359 652 aa15.96■□□□□ 0.15
SMG5-204ENST00000476954 THEGLP0DJG4 465 aa15.96■□□□□ 0.15
SMG5-204ENST00000476954 GOT1P17174 413 aa15.96■□□□□ 0.15
SMG5-204ENST00000476954 LONP1P36776 959 aaKnown RBP15.96■□□□□ 0.15
SMG5-204ENST00000476954 PSEN1P49768 467 aa15.96■□□□□ 0.15
SMG5-204ENST00000476954 ALCAMQ13740 583 aa15.96■□□□□ 0.15
SMG5-204ENST00000476954 TBR1Q16650 682 aa15.96■□□□□ 0.15
SMG5-204ENST00000476954 HS1BP3Q53T59 392 aa15.96■□□□□ 0.15
SMG5-204ENST00000476954 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.96■□□□□ 0.15
SMG5-204ENST00000476954 PRPF39Q86UA1 669 aaKnown RBP15.96■□□□□ 0.15
SMG5-204ENST00000476954 IQCHQ86VS3 1027 aa15.96■□□□□ 0.15
SMG5-204ENST00000476954 PLEKHO2Q8TD55 490 aa15.96■□□□□ 0.15
SMG5-204ENST00000476954 TMA16Q96EY4 203 aaKnown RBP15.96■□□□□ 0.15
SMG5-204ENST00000476954 FRMD3A2A2Y4 597 aa15.95■□□□□ 0.14
SMG5-204ENST00000476954 CLIC2O15247 247 aa15.95■□□□□ 0.14
SMG5-204ENST00000476954 RTN2O75298 545 aa15.95■□□□□ 0.14
SMG5-204ENST00000476954 PPFIA2O75334 1257 aa15.95■□□□□ 0.14
SMG5-204ENST00000476954 PIAS2O75928 621 aa15.95■□□□□ 0.14
SMG5-204ENST00000476954 CTSOP43234 321 aaPredicted RBP15.95■□□□□ 0.14
SMG5-204ENST00000476954 CCR10P46092 362 aa15.95■□□□□ 0.14
SMG5-204ENST00000476954 CYP2J2P51589 502 aa15.95■□□□□ 0.14
SMG5-204ENST00000476954 CYP4F2P78329 520 aa15.95■□□□□ 0.14
SMG5-204ENST00000476954 FOXK1P85037 733 aa15.95■□□□□ 0.14
SMG5-204ENST00000476954 STAT4Q14765 748 aa15.95■□□□□ 0.14
SMG5-204ENST00000476954 CLCA4Q14CN2 919 aa15.95■□□□□ 0.14
SMG5-204ENST00000476954 TRIP4Q15650 581 aaPredicted RBP15.95■□□□□ 0.14
SMG5-204ENST00000476954 STK40Q8N2I9 435 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms