RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 MPP7Q5T2T1 576 aa11.83□□□□□ -0.52
BRCA1-213ENST00000476777 SHC4Q6S5L8 630 aa11.83□□□□□ -0.52
BRCA1-213ENST00000476777 TTC17Q96AE7 1141 aa11.83□□□□□ -0.52
BRCA1-213ENST00000476777 HIC2Q96JB3 615 aa11.83□□□□□ -0.52
BRCA1-213ENST00000476777 SERAC1Q96JX3 654 aa11.83□□□□□ -0.52
BRCA1-213ENST00000476777 HEXIM2Q96MH2 286 aaKnown RBP11.83□□□□□ -0.52
BRCA1-213ENST00000476777 LGMNQ99538 433 aa11.83□□□□□ -0.52
BRCA1-213ENST00000476777 NIF3L1Q9GZT8 377 aa11.83□□□□□ -0.52
BRCA1-213ENST00000476777 KCTD10Q9H3F6 313 aa11.83□□□□□ -0.52
BRCA1-213ENST00000476777 CLMPQ9H6B4 373 aa11.83□□□□□ -0.52
BRCA1-213ENST00000476777 MAGEF1Q9HAY2 307 aa11.83□□□□□ -0.52
BRCA1-213ENST00000476777 SFMBT1Q9UHJ3 866 aa11.83□□□□□ -0.52
BRCA1-213ENST00000476777 FZD4Q9ULV1 537 aa11.83□□□□□ -0.52
BRCA1-213ENST00000476777 TDRD6O60522 2096 aaKnown RBP11.82□□□□□ -0.52
BRCA1-213ENST00000476777 SPTLC2O15270 562 aa11.82□□□□□ -0.52
BRCA1-213ENST00000476777 RNASEH1O60930 286 aaKnown RBP11.82□□□□□ -0.52
BRCA1-213ENST00000476777 RNASEH2AO75792 299 aaKnown RBP11.82□□□□□ -0.52
BRCA1-213ENST00000476777 NR3C1P04150 777 aa11.82□□□□□ -0.52
BRCA1-213ENST00000476777 SLFN14P0C7P3 912 aa11.82□□□□□ -0.52
BRCA1-213ENST00000476777 STK4Q13043 487 aa11.82□□□□□ -0.52
BRCA1-213ENST00000476777 CUL4BQ13620 913 aa11.82□□□□□ -0.52
BRCA1-213ENST00000476777 ARID5BQ14865 1188 aa11.82□□□□□ -0.52
BRCA1-213ENST00000476777 C9orf64Q5T6V5 341 aa11.82□□□□□ -0.52
BRCA1-213ENST00000476777 RFWD3Q6PCD5 774 aa11.82□□□□□ -0.52
BRCA1-213ENST00000476777 SPATS2Q86XZ4 545 aaKnown RBP11.82□□□□□ -0.52
BRCA1-213ENST00000476777 MMAAQ8IVH4 418 aaKnown RBP11.82□□□□□ -0.52
BRCA1-213ENST00000476777 OXR1Q8N573 874 aa11.82□□□□□ -0.52
BRCA1-213ENST00000476777 KIAA0895Q8NCT3 520 aa11.82□□□□□ -0.52
BRCA1-213ENST00000476777 ZNF248Q8NDW4 579 aa11.82□□□□□ -0.52
BRCA1-213ENST00000476777 TAS1R2Q8TE23 839 aa11.82□□□□□ -0.52
BRCA1-213ENST00000476777 NAF1Q96HR8 494 aaKnown RBP11.82□□□□□ -0.52
BRCA1-213ENST00000476777 MRGPRX3Q96LB0 322 aa11.82□□□□□ -0.52
BRCA1-213ENST00000476777 ULBP1Q9BZM6 244 aa11.82□□□□□ -0.52
BRCA1-213ENST00000476777 IMPG2Q9BZV3 1241 aa11.82□□□□□ -0.52
BRCA1-213ENST00000476777 CPNE5Q9HCH3 593 aa11.82□□□□□ -0.52
BRCA1-213ENST00000476777 OLA1Q9NTK5 396 aaKnown RBP11.82□□□□□ -0.52
BRCA1-213ENST00000476777 MTMR6Q9Y217 621 aa11.82□□□□□ -0.52
BRCA1-213ENST00000476777 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.81□□□□□ -0.52
BRCA1-213ENST00000476777 B8ZZF3 427 aa11.81□□□□□ -0.52
BRCA1-213ENST00000476777 PYCARD-AS1I3L0S3 204 aa11.81□□□□□ -0.52
BRCA1-213ENST00000476777 TULP2O00295 520 aa11.81□□□□□ -0.52
BRCA1-213ENST00000476777 POLR2DO15514 142 aaKnown RBP11.81□□□□□ -0.52
BRCA1-213ENST00000476777 MSI1O43347 362 aaKnown RBP11.81□□□□□ -0.52
BRCA1-213ENST00000476777 LATO43561 262 aa11.81□□□□□ -0.52
BRCA1-213ENST00000476777 TBL1XO60907 577 aa11.81□□□□□ -0.52
BRCA1-213ENST00000476777 PPP6R2O75170 966 aa11.81□□□□□ -0.52
BRCA1-213ENST00000476777 MT-CO3P00414 261 aa11.81□□□□□ -0.52
BRCA1-213ENST00000476777 C6P13671 934 aa11.81□□□□□ -0.52
BRCA1-213ENST00000476777 SLC8A1P32418 973 aa11.81□□□□□ -0.52
BRCA1-213ENST00000476777 CSKP41240 450 aa11.81□□□□□ -0.52
BRCA1-213ENST00000476777 GCLMP48507 274 aa11.81□□□□□ -0.52
BRCA1-213ENST00000476777 VAMP7P51809 220 aa11.81□□□□□ -0.52
BRCA1-213ENST00000476777 ADPRHP54922 357 aa11.81□□□□□ -0.52
BRCA1-213ENST00000476777 UCNP55089 124 aa11.81□□□□□ -0.52
BRCA1-213ENST00000476777 PCBP4P57723 403 aaKnown RBP11.81□□□□□ -0.52
BRCA1-213ENST00000476777 TMPRSS3P57727 454 aa11.81□□□□□ -0.52
BRCA1-213ENST00000476777 E2F1Q01094 437 aa11.81□□□□□ -0.52
BRCA1-213ENST00000476777 PPP3CAQ08209 521 aa11.81□□□□□ -0.52
BRCA1-213ENST00000476777 LY6DQ14210 128 aa11.81□□□□□ -0.52
BRCA1-213ENST00000476777 SLC45A4Q5BKX6 768 aa11.81□□□□□ -0.52
BRCA1-213ENST00000476777 ARHGAP40Q5TG30 622 aa11.81□□□□□ -0.52
BRCA1-213ENST00000476777 PIK3R6Q5UE93 754 aa11.81□□□□□ -0.52
BRCA1-213ENST00000476777 ARHGAP17Q68EM7 881 aa11.81□□□□□ -0.52
BRCA1-213ENST00000476777 KDM7AQ6ZMT4 941 aa11.81□□□□□ -0.52
BRCA1-213ENST00000476777 DHX40Q8IX18 779 aaKnown RBP11.81□□□□□ -0.52
BRCA1-213ENST00000476777 AADATQ8N5Z0 425 aa11.81□□□□□ -0.52
BRCA1-213ENST00000476777 FAM181AQ8N9Y4 354 aa11.81□□□□□ -0.52
BRCA1-213ENST00000476777 MFSD2AQ8NA29 543 aa11.81□□□□□ -0.52
BRCA1-213ENST00000476777 ANKRD52Q8NB46 1076 aa11.81□□□□□ -0.52
BRCA1-213ENST00000476777 SLC4A11Q8NBS3 891 aa11.81□□□□□ -0.52
BRCA1-213ENST00000476777 EDEM1Q92611 657 aa11.81□□□□□ -0.52
BRCA1-213ENST00000476777 TTC9Q92623 222 aa11.81□□□□□ -0.52
BRCA1-213ENST00000476777 ZNF578Q96N58 590 aaPredicted RBP11.81□□□□□ -0.52
BRCA1-213ENST00000476777 OMDQ99983 421 aa11.81□□□□□ -0.52
BRCA1-213ENST00000476777 DNAI2Q9GZS0 605 aa11.81□□□□□ -0.52
BRCA1-213ENST00000476777 INTS6Q9UL03 887 aaKnown RBP11.81□□□□□ -0.52
BRCA1-213ENST00000476777 TPX2Q9ULW0 747 aaKnown RBP11.81□□□□□ -0.52
BRCA1-213ENST00000476777 PCDHB1Q9Y5F3 818 aa11.81□□□□□ -0.52
BRCA1-213ENST00000476777 USP9XQ93008 2570 aaPredicted RBP11.81□□□□□ -0.52
BRCA1-213ENST00000476777 UNC79Q9P2D8 2635 aa11.81□□□□□ -0.52
BRCA1-213ENST00000476777 GOLGA6L7A0A1B0GV03 622 aa11.8□□□□□ -0.52
BRCA1-213ENST00000476777 TTC34A8MYJ7 566 aa11.8□□□□□ -0.52
BRCA1-213ENST00000476777 TRIM38O00635 465 aa11.8□□□□□ -0.52
BRCA1-213ENST00000476777 PDXKO00764 312 aa11.8□□□□□ -0.52
BRCA1-213ENST00000476777 ARHGAP6O43182 974 aa11.8□□□□□ -0.52
BRCA1-213ENST00000476777 SIGLEC6O43699 453 aa11.8□□□□□ -0.52
BRCA1-213ENST00000476777 KLRC4O43908 158 aa11.8□□□□□ -0.52
BRCA1-213ENST00000476777 DXOO77932 396 aaKnown RBP11.8□□□□□ -0.52
BRCA1-213ENST00000476777 GOT1P17174 413 aa11.8□□□□□ -0.52
BRCA1-213ENST00000476777 SLC6A4P31645 630 aa11.8□□□□□ -0.52
BRCA1-213ENST00000476777 AFMP43652 599 aa11.8□□□□□ -0.52
BRCA1-213ENST00000476777 PSMD8P48556 350 aa11.8□□□□□ -0.52
BRCA1-213ENST00000476777 RAD23BP54727 409 aa11.8□□□□□ -0.52
BRCA1-213ENST00000476777 ST8SIA6P61647 398 aa11.8□□□□□ -0.52
BRCA1-213ENST00000476777 PPP2CBP62714 309 aa11.8□□□□□ -0.52
BRCA1-213ENST00000476777 PPP2CAP67775 309 aa11.8□□□□□ -0.52
BRCA1-213ENST00000476777 KCNC4Q03721 635 aa11.8□□□□□ -0.52
BRCA1-213ENST00000476777 ZNF211Q13398 564 aaPredicted RBP11.8□□□□□ -0.52
BRCA1-213ENST00000476777 FAM133BQ5BKY9 247 aaKnown RBP11.8□□□□□ -0.52
BRCA1-213ENST00000476777 BSPRYQ5W0U4 402 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms