RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 TMEM86AQ8N2M4 240 aa16.91■□□□□ 0.3
TMEM53-208ENST00000476724 GIMAP7Q8NHV1 300 aa16.91■□□□□ 0.3
TMEM53-208ENST00000476724 NTAN1Q96AB6 310 aa16.91■□□□□ 0.3
TMEM53-208ENST00000476724 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.91■□□□□ 0.3
TMEM53-208ENST00000476724 UNC93B1Q9H1C4 597 aa16.91■□□□□ 0.3
TMEM53-208ENST00000476724 IGSF9Q9P2J2 1179 aa16.91■□□□□ 0.3
TMEM53-208ENST00000476724 HMX2A2RU54 273 aa16.9■□□□□ 0.3
TMEM53-208ENST00000476724 RNF103O00237 685 aa16.9■□□□□ 0.3
TMEM53-208ENST00000476724 UGT1A9O60656 530 aa16.9■□□□□ 0.3
TMEM53-208ENST00000476724 FAM200BP0CF97 657 aa16.9■□□□□ 0.3
TMEM53-208ENST00000476724 LHX1P48742 406 aa16.9■□□□□ 0.3
TMEM53-208ENST00000476724 TMPRSS15P98073 1019 aa16.9■□□□□ 0.3
TMEM53-208ENST00000476724 MROH9Q5TGP6 573 aa16.9■□□□□ 0.3
TMEM53-208ENST00000476724 OTUD1Q5VV17 481 aaPredicted RBP16.9■□□□□ 0.3
TMEM53-208ENST00000476724 PDCD7Q8N8D1 485 aaKnown RBP16.9■□□□□ 0.3
TMEM53-208ENST00000476724 SLC43A3Q8NBI5 491 aa16.9■□□□□ 0.3
TMEM53-208ENST00000476724 RNF169Q8NCN4 708 aa16.9■□□□□ 0.3
TMEM53-208ENST00000476724 ARMC2Q8NEN0 867 aa16.9■□□□□ 0.3
TMEM53-208ENST00000476724 MED10Q9BTT4 135 aa16.9■□□□□ 0.3
TMEM53-208ENST00000476724 UGT1A7Q9HAW7 530 aa16.9■□□□□ 0.3
TMEM53-208ENST00000476724 UGT1A10Q9HAW8 530 aa16.9■□□□□ 0.3
TMEM53-208ENST00000476724 UGT1A8Q9HAW9 530 aa16.9■□□□□ 0.3
TMEM53-208ENST00000476724 TDRD15B5MCY1 1934 aaKnown RBP16.9■□□□□ 0.3
TMEM53-208ENST00000476724 WDR27A2RRH5 827 aa16.9■□□□□ 0.3
TMEM53-208ENST00000476724 ARL5CA6NH57 179 aa16.9■□□□□ 0.3
TMEM53-208ENST00000476724 C9IYK1 514 aa16.9■□□□□ 0.3
TMEM53-208ENST00000476724 EEF2KO00418 725 aaKnown RBP16.9■□□□□ 0.3
TMEM53-208ENST00000476724 NCAM2O15394 837 aa16.9■□□□□ 0.3
TMEM53-208ENST00000476724 CALB2P22676 271 aa16.9■□□□□ 0.3
TMEM53-208ENST00000476724 HCAR3P49019 387 aa16.9■□□□□ 0.3
TMEM53-208ENST00000476724 SCNN1GP51170 649 aa16.9■□□□□ 0.3
TMEM53-208ENST00000476724 TKTL1P51854 596 aa16.9■□□□□ 0.3
TMEM53-208ENST00000476724 PRMT2P55345 433 aa16.9■□□□□ 0.3
TMEM53-208ENST00000476724 BMPR2Q13873 1038 aa16.9■□□□□ 0.3
TMEM53-208ENST00000476724 DPYSQ14117 519 aa16.9■□□□□ 0.3
TMEM53-208ENST00000476724 MBTPS1Q14703 1052 aa16.9■□□□□ 0.3
TMEM53-208ENST00000476724 ARHGEF6Q15052 776 aa16.9■□□□□ 0.3
TMEM53-208ENST00000476724 WSCD1Q658N2 575 aa16.9■□□□□ 0.3
TMEM53-208ENST00000476724 CASC4Q6P4E1 433 aa16.9■□□□□ 0.3
TMEM53-208ENST00000476724 RFX8Q6ZV50 586 aa16.9■□□□□ 0.3
TMEM53-208ENST00000476724 MRPL10Q7Z7H8 261 aaKnown RBP16.9■□□□□ 0.3
TMEM53-208ENST00000476724 STKLD1Q8NE28 680 aa16.9■□□□□ 0.3
TMEM53-208ENST00000476724 ADAM2Q99965 735 aa16.9■□□□□ 0.3
TMEM53-208ENST00000476724 BTBD10Q9BSF8 475 aa16.9■□□□□ 0.3
TMEM53-208ENST00000476724 TSPYL2Q9H2G4 693 aaPredicted RBP16.9■□□□□ 0.3
TMEM53-208ENST00000476724 RRN3Q9NYV6 651 aa16.9■□□□□ 0.3
TMEM53-208ENST00000476724 C15orf41Q9Y2V0 281 aa16.9■□□□□ 0.3
TMEM53-208ENST00000476724 MFHAS1Q9Y4C4 1052 aa16.9■□□□□ 0.3
TMEM53-208ENST00000476724 TSC2P49815 1807 aa16.89■□□□□ 0.29
TMEM53-208ENST00000476724 CLDN5O00501 218 aa16.89■□□□□ 0.29
TMEM53-208ENST00000476724 CREB3O43889 395 aa16.89■□□□□ 0.29
TMEM53-208ENST00000476724 BEST1O76090 585 aa16.89■□□□□ 0.29
TMEM53-208ENST00000476724 BPGMP07738 259 aa16.89■□□□□ 0.29
TMEM53-208ENST00000476724 MYL2P10916 166 aa16.89■□□□□ 0.29
TMEM53-208ENST00000476724 SERPINB3P29508 390 aa16.89■□□□□ 0.29
TMEM53-208ENST00000476724 ADRA1BP35368 520 aa16.89■□□□□ 0.29
TMEM53-208ENST00000476724 CCNG1P51959 295 aa16.89■□□□□ 0.29
TMEM53-208ENST00000476724 ZNF135P52742 658 aaPredicted RBP16.89■□□□□ 0.29
TMEM53-208ENST00000476724 NIPAL4Q0D2K0 466 aa16.89■□□□□ 0.29
TMEM53-208ENST00000476724 SCAPQ12770 1279 aa16.89■□□□□ 0.29
TMEM53-208ENST00000476724 IFRD2Q12894 506 aaPredicted RBP16.89■□□□□ 0.29
TMEM53-208ENST00000476724 CCDC33Q8N5R6 958 aa16.89■□□□□ 0.29
TMEM53-208ENST00000476724 CCNYQ8ND76 341 aa16.89■□□□□ 0.29
TMEM53-208ENST00000476724 FAM13CQ8NE31 585 aa16.89■□□□□ 0.29
TMEM53-208ENST00000476724 NDRG1Q92597 394 aaKnown RBP16.89■□□□□ 0.29
TMEM53-208ENST00000476724 ATP2A3Q93084 1043 aa16.89■□□□□ 0.29
TMEM53-208ENST00000476724 PTCD3Q96EY7 689 aaKnown RBP16.89■□□□□ 0.29
TMEM53-208ENST00000476724 ANKRD27Q96NW4 1050 aa16.89■□□□□ 0.29
TMEM53-208ENST00000476724 BRD8Q9H0E9 1235 aa16.89■□□□□ 0.29
TMEM53-208ENST00000476724 PRDM12Q9H4Q4 367 aa16.89■□□□□ 0.29
TMEM53-208ENST00000476724 CNGB3Q9NQW8 809 aa16.89■□□□□ 0.29
TMEM53-208ENST00000476724 PCMTD2Q9NV79 361 aa16.89■□□□□ 0.29
TMEM53-208ENST00000476724 E7ENQ6 273 aa16.89■□□□□ 0.29
TMEM53-208ENST00000476724 CAPN9O14815 690 aa16.89■□□□□ 0.29
TMEM53-208ENST00000476724 DCLK1O15075 740 aa16.89■□□□□ 0.29
TMEM53-208ENST00000476724 OCRLQ01968 901 aa16.89■□□□□ 0.29
TMEM53-208ENST00000476724 BST1Q10588 318 aa16.89■□□□□ 0.29
TMEM53-208ENST00000476724 MDH1BQ5I0G3 518 aa16.89■□□□□ 0.29
TMEM53-208ENST00000476724 INTS6LQ5JSJ4 861 aaKnown RBP16.89■□□□□ 0.29
TMEM53-208ENST00000476724 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.89■□□□□ 0.29
TMEM53-208ENST00000476724 ARNTL2Q8WYA1 636 aa16.89■□□□□ 0.29
TMEM53-208ENST00000476724 PGAP3Q96FM1 320 aaPredicted RBP16.89■□□□□ 0.29
TMEM53-208ENST00000476724 RSRC1Q96IZ7 334 aaKnown RBP16.89■□□□□ 0.29
TMEM53-208ENST00000476724 SENP8Q96LD8 212 aa16.89■□□□□ 0.29
TMEM53-208ENST00000476724 PAAF1Q9BRP4 392 aa16.89■□□□□ 0.29
TMEM53-208ENST00000476724 DDX43Q9NXZ2 648 aaKnown RBP16.89■□□□□ 0.29
TMEM53-208ENST00000476724 PHF24Q9UPV7 400 aa16.89■□□□□ 0.29
TMEM53-208ENST00000476724 GLRA3O75311 464 aa16.88■□□□□ 0.29
TMEM53-208ENST00000476724 THP07101 528 aa16.88■□□□□ 0.29
TMEM53-208ENST00000476724 ACAT1P24752 427 aaKnown RBP16.88■□□□□ 0.29
TMEM53-208ENST00000476724 EPHB2P29323 1055 aa16.88■□□□□ 0.29
TMEM53-208ENST00000476724 NDUFV1P49821 464 aa16.88■□□□□ 0.29
TMEM53-208ENST00000476724 CLCNKBP51801 687 aa16.88■□□□□ 0.29
TMEM53-208ENST00000476724 MAP3K7CLP57077 242 aa16.88■□□□□ 0.29
TMEM53-208ENST00000476724 WASHC5Q12768 1159 aa16.88■□□□□ 0.29
TMEM53-208ENST00000476724 NME3Q13232 169 aa16.88■□□□□ 0.29
TMEM53-208ENST00000476724 CHI3L2Q15782 390 aa16.88■□□□□ 0.29
TMEM53-208ENST00000476724 SYPL2Q5VXT5 272 aa16.88■□□□□ 0.29
TMEM53-208ENST00000476724 CRLF3Q8IUI8 442 aa16.88■□□□□ 0.29
TMEM53-208ENST00000476724 ZNF567Q8N184 647 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms