RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 PON1P27169 355 aa7.28□□□□□ -1.24
HDAC3-207ENST00000475549 PPP1R2P41236 205 aa7.28□□□□□ -1.24
HDAC3-207ENST00000475549 CSKP41240 450 aa7.28□□□□□ -1.24
HDAC3-207ENST00000475549 SLC11A2P49281 568 aa7.28□□□□□ -1.24
HDAC3-207ENST00000475549 NUMBP49757 651 aa7.28□□□□□ -1.24
HDAC3-207ENST00000475549 YWHAZP63104 245 aaKnown RBP7.28□□□□□ -1.24
HDAC3-207ENST00000475549 CETN1Q12798 172 aa7.28□□□□□ -1.24
HDAC3-207ENST00000475549 ARID5BQ14865 1188 aa7.28□□□□□ -1.24
HDAC3-207ENST00000475549 STILQ15468 1287 aa7.28□□□□□ -1.24
HDAC3-207ENST00000475549 HNRNPA1L2Q32P51 320 aaKnown RBP7.28□□□□□ -1.24
HDAC3-207ENST00000475549 FNDC3BQ53EP0 1204 aaKnown RBP7.28□□□□□ -1.24
HDAC3-207ENST00000475549 PITRM1Q5JRX3 1037 aa7.28□□□□□ -1.24
HDAC3-207ENST00000475549 C9orf64Q5T6V5 341 aa7.28□□□□□ -1.24
HDAC3-207ENST00000475549 NUGGCQ68CJ6 796 aa7.28□□□□□ -1.24
HDAC3-207ENST00000475549 LAYNQ6UX15 382 aa7.28□□□□□ -1.24
HDAC3-207ENST00000475549 BEND5Q7L4P6 421 aa7.28□□□□□ -1.24
HDAC3-207ENST00000475549 RAB44Q7Z6P3 723 aaPredicted RBP7.28□□□□□ -1.24
HDAC3-207ENST00000475549 NAXDQ8IW45 347 aa7.28□□□□□ -1.24
HDAC3-207ENST00000475549 MFN1Q8IWA4 741 aa7.28□□□□□ -1.24
HDAC3-207ENST00000475549 APCDD1Q8J025 514 aa7.28□□□□□ -1.24
HDAC3-207ENST00000475549 CARNMT1Q8N4J0 409 aa7.28□□□□□ -1.24
HDAC3-207ENST00000475549 BAHD1Q8TBE0 780 aaPredicted RBP7.28□□□□□ -1.24
HDAC3-207ENST00000475549 WFIKKN2Q8TEU8 576 aa7.28□□□□□ -1.24
HDAC3-207ENST00000475549 BIRC7Q96CA5 298 aa7.28□□□□□ -1.24
HDAC3-207ENST00000475549 CPXM1Q96SM3 734 aa7.28□□□□□ -1.24
HDAC3-207ENST00000475549 FAM129BQ96TA1 746 aa7.28□□□□□ -1.24
HDAC3-207ENST00000475549 IRX2Q9BZI1 471 aaPredicted RBP7.28□□□□□ -1.24
HDAC3-207ENST00000475549 RSPH9Q9H1X1 276 aaPredicted RBP7.28□□□□□ -1.24
HDAC3-207ENST00000475549 LHX5Q9H2C1 402 aa7.28□□□□□ -1.24
HDAC3-207ENST00000475549 GAREM1Q9H706 876 aa7.28□□□□□ -1.24
HDAC3-207ENST00000475549 TOR4AQ9NXH8 423 aa7.28□□□□□ -1.24
HDAC3-207ENST00000475549 KIAA1468Q9P260 1216 aa7.28□□□□□ -1.24
HDAC3-207ENST00000475549 SUSD2Q9UGT4 822 aa7.28□□□□□ -1.24
HDAC3-207ENST00000475549 PCOLCE2Q9UKZ9 415 aa7.28□□□□□ -1.24
HDAC3-207ENST00000475549 MSRB2Q9Y3D2 182 aa7.28□□□□□ -1.24
HDAC3-207ENST00000475549 NEUROG3Q9Y4Z2 214 aa7.28□□□□□ -1.24
HDAC3-207ENST00000475549 I6L893 689 aaPredicted RBP7.27□□□□□ -1.25
HDAC3-207ENST00000475549 FOXN3O00409 490 aaPredicted RBP7.27□□□□□ -1.25
HDAC3-207ENST00000475549 RIOK3O14730 519 aaKnown RBP7.27□□□□□ -1.25
HDAC3-207ENST00000475549 SIN3BO75182 1162 aa7.27□□□□□ -1.25
HDAC3-207ENST00000475549 LUC7L3O95232 432 aaKnown RBP7.27□□□□□ -1.25
HDAC3-207ENST00000475549 TRUB2O95900 331 aaKnown RBP7.27□□□□□ -1.25
HDAC3-207ENST00000475549 MOCS2O96007 188 aaPredicted RBP7.27□□□□□ -1.25
HDAC3-207ENST00000475549 ATP5BP06576 529 aaKnown RBP7.27□□□□□ -1.25
HDAC3-207ENST00000475549 VAV1P15498 845 aa7.27□□□□□ -1.25
HDAC3-207ENST00000475549 POLR2EP19388 210 aaKnown RBP7.27□□□□□ -1.25
HDAC3-207ENST00000475549 IRAK1P51617 712 aa7.27□□□□□ -1.25
HDAC3-207ENST00000475549 ARID5AQ03989 594 aa7.27□□□□□ -1.25
HDAC3-207ENST00000475549 ZBTB16Q05516 673 aa7.27□□□□□ -1.25
HDAC3-207ENST00000475549 PDCLQ13371 301 aa7.27□□□□□ -1.25
HDAC3-207ENST00000475549 NNTQ13423 1086 aa7.27□□□□□ -1.25
HDAC3-207ENST00000475549 KCNJ12Q14500 433 aa7.27□□□□□ -1.25
HDAC3-207ENST00000475549 PRAMEF14Q5SWL7 426 aa7.27□□□□□ -1.25
HDAC3-207ENST00000475549 ARTNQ5T4W7 220 aa7.27□□□□□ -1.25
HDAC3-207ENST00000475549 RAP1GAP2Q684P5 730 aa7.27□□□□□ -1.25
HDAC3-207ENST00000475549 FBXL22Q6P050 247 aa7.27□□□□□ -1.25
HDAC3-207ENST00000475549 MARCH9Q86YJ5 346 aa7.27□□□□□ -1.25
HDAC3-207ENST00000475549 LGI2Q8N0V4 545 aa7.27□□□□□ -1.25
HDAC3-207ENST00000475549 HJURPQ8NCD3 748 aaPredicted RBP7.27□□□□□ -1.25
HDAC3-207ENST00000475549 OR52K2Q8NGK3 314 aa7.27□□□□□ -1.25
HDAC3-207ENST00000475549 SHC3Q92529 594 aa7.27□□□□□ -1.25
HDAC3-207ENST00000475549 FAM149B1Q96BN6 582 aa7.27□□□□□ -1.25
HDAC3-207ENST00000475549 ALG14Q96F25 216 aa7.27□□□□□ -1.25
HDAC3-207ENST00000475549 RPL10LQ96L21 214 aaKnown RBP7.27□□□□□ -1.25
HDAC3-207ENST00000475549 SERPINB11Q96P15 392 aa7.27□□□□□ -1.25
HDAC3-207ENST00000475549 ZDHHC5Q9C0B5 715 aa7.27□□□□□ -1.25
HDAC3-207ENST00000475549 NEUROG2Q9H2A3 272 aa7.27□□□□□ -1.25
HDAC3-207ENST00000475549 THAP9Q9H5L6 903 aa7.27□□□□□ -1.25
HDAC3-207ENST00000475549 POPDC2Q9HBU9 364 aa7.27□□□□□ -1.25
HDAC3-207ENST00000475549 TM9SF3Q9HD45 589 aa7.27□□□□□ -1.25
HDAC3-207ENST00000475549 SIX2Q9NPC8 291 aa7.27□□□□□ -1.25
HDAC3-207ENST00000475549 ANLNQ9NQW6 1124 aa7.27□□□□□ -1.25
HDAC3-207ENST00000475549 SUN2Q9UH99 717 aa7.27□□□□□ -1.25
HDAC3-207ENST00000475549 RWDD2AQ9UIY3 292 aa7.27□□□□□ -1.25
HDAC3-207ENST00000475549 ERVW-1Q9UQF0 538 aa7.27□□□□□ -1.25
HDAC3-207ENST00000475549 BTBD3Q9Y2F9 522 aa7.27□□□□□ -1.25
HDAC3-207ENST00000475549 ANKRD6Q9Y2G4 727 aa7.27□□□□□ -1.25
HDAC3-207ENST00000475549 SNX11Q9Y5W9 270 aa7.27□□□□□ -1.25
HDAC3-207ENST00000475549 THADAQ6YHU6 1953 aa7.27□□□□□ -1.25
HDAC3-207ENST00000475549 MYO18AQ92614 2054 aaKnown RBP7.27□□□□□ -1.25
HDAC3-207ENST00000475549 DSPP15924 2871 aaKnown RBP7.27□□□□□ -1.25
HDAC3-207ENST00000475549 ASCC3Q8N3C0 2202 aaKnown RBP7.27□□□□□ -1.25
HDAC3-207ENST00000475549 RALGAPA1Q6GYQ0 2036 aa7.27□□□□□ -1.25
HDAC3-207ENST00000475549 SRRM3A6NNA2 597 aaPredicted RBP7.26□□□□□ -1.25
HDAC3-207ENST00000475549 THAP12O43422 761 aa7.26□□□□□ -1.25
HDAC3-207ENST00000475549 GRAP2O75791 330 aa7.26□□□□□ -1.25
HDAC3-207ENST00000475549 DKK1O94907 266 aa7.26□□□□□ -1.25
HDAC3-207ENST00000475549 FSBPO95073 299 aa7.26□□□□□ -1.25
HDAC3-207ENST00000475549 SEMA4FO95754 770 aa7.26□□□□□ -1.25
HDAC3-207ENST00000475549 ERBB2P04626 1255 aa7.26□□□□□ -1.25
HDAC3-207ENST00000475549 WNT1P04628 370 aa7.26□□□□□ -1.25
HDAC3-207ENST00000475549 ATXN1LP0C7T5 689 aaKnown RBP7.26□□□□□ -1.25
HDAC3-207ENST00000475549 FTH1P19P0C7X4 201 aa7.26□□□□□ -1.25
HDAC3-207ENST00000475549 ZNF883P0CG24 379 aa7.26□□□□□ -1.25
HDAC3-207ENST00000475549 PNMA6AP0CW24 399 aaPredicted RBP7.26□□□□□ -1.25
HDAC3-207ENST00000475549 TFE3P19532 575 aaPredicted RBP7.26□□□□□ -1.25
HDAC3-207ENST00000475549 TACR2P21452 398 aa7.26□□□□□ -1.25
HDAC3-207ENST00000475549 CD27P26842 260 aa7.26□□□□□ -1.25
HDAC3-207ENST00000475549 MZF1P28698 734 aaPredicted RBP7.26□□□□□ -1.25
HDAC3-207ENST00000475549 GNA15P30679 374 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms