RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 LGI2Q8N0V4 545 aa9.77□□□□□ -0.85
PDPN-204ENST00000475043 ZNF366Q8N895 744 aa9.77□□□□□ -0.85
PDPN-204ENST00000475043 ATP6V0D2Q8N8Y2 350 aa9.77□□□□□ -0.85
PDPN-204ENST00000475043 ZNF557Q8N988 423 aaPredicted RBP9.77□□□□□ -0.85
PDPN-204ENST00000475043 TMEM35BQ8NCS4 154 aa9.77□□□□□ -0.85
PDPN-204ENST00000475043 WFDC5Q8TCV5 224 aa9.77□□□□□ -0.85
PDPN-204ENST00000475043 WFIKKN2Q8TEU8 576 aa9.77□□□□□ -0.85
PDPN-204ENST00000475043 PRCCQ92733 491 aaPredicted RBP9.77□□□□□ -0.85
PDPN-204ENST00000475043 SIPA1Q96FS4 1042 aa9.77□□□□□ -0.85
PDPN-204ENST00000475043 SLC39A13Q96H72 371 aa9.77□□□□□ -0.85
PDPN-204ENST00000475043 BTN2A3PQ96KV6 586 aa9.77□□□□□ -0.85
PDPN-204ENST00000475043 PRICKLE1Q96MT3 831 aaPredicted RBP9.77□□□□□ -0.85
PDPN-204ENST00000475043 MKRN2Q9H000 416 aaKnown RBP9.77□□□□□ -0.85
PDPN-204ENST00000475043 NUCKS1Q9H1E3 243 aaKnown RBP9.77□□□□□ -0.85
PDPN-204ENST00000475043 CD93Q9NPY3 652 aa9.77□□□□□ -0.85
PDPN-204ENST00000475043 TMEM74BQ9NUR3 256 aa9.77□□□□□ -0.85
PDPN-204ENST00000475043 DDIT4Q9NX09 232 aa9.77□□□□□ -0.85
PDPN-204ENST00000475043 SLC12A6Q9UHW9 1150 aa9.77□□□□□ -0.85
PDPN-204ENST00000475043 XPO7Q9UIA9 1087 aaKnown RBP9.77□□□□□ -0.85
PDPN-204ENST00000475043 MUC22E2RYF6 1773 aaPredicted RBP9.77□□□□□ -0.85
PDPN-204ENST00000475043 DNAH14Q0VDD8 3507 aa9.77□□□□□ -0.85
PDPN-204ENST00000475043 SDK1Q7Z5N4 2213 aa9.76□□□□□ -0.85
PDPN-204ENST00000475043 ADAMTS9Q9P2N4 1935 aa9.76□□□□□ -0.85
PDPN-204ENST00000475043 C4orf47A7E2U8 309 aa9.76□□□□□ -0.85
PDPN-204ENST00000475043 KCNU1A8MYU2 1149 aa9.76□□□□□ -0.85
PDPN-204ENST00000475043 H0Y626 953 aa9.76□□□□□ -0.85
PDPN-204ENST00000475043 MBD3O95983 291 aa9.76□□□□□ -0.85
PDPN-204ENST00000475043 CFIP05156 583 aa9.76□□□□□ -0.85
PDPN-204ENST00000475043 GLI1P08151 1106 aa9.76□□□□□ -0.85
PDPN-204ENST00000475043 SLC2A3P11169 496 aa9.76□□□□□ -0.85
PDPN-204ENST00000475043 CYP11B1P15538 503 aa9.76□□□□□ -0.85
PDPN-204ENST00000475043 CDK11BP21127 795 aaKnown RBP9.76□□□□□ -0.85
PDPN-204ENST00000475043 ABCB4P21439 1286 aa9.76□□□□□ -0.85
PDPN-204ENST00000475043 TACR2P21452 398 aa9.76□□□□□ -0.85
PDPN-204ENST00000475043 LIMK1P53667 647 aa9.76□□□□□ -0.85
PDPN-204ENST00000475043 RNASE9P60153 205 aaKnown RBP9.76□□□□□ -0.85
PDPN-204ENST00000475043 IRX4P78413 519 aa9.76□□□□□ -0.85
PDPN-204ENST00000475043 SLC6A3Q01959 620 aa9.76□□□□□ -0.85
PDPN-204ENST00000475043 ZNF33AQ06730 810 aa9.76□□□□□ -0.85
PDPN-204ENST00000475043 NME3Q13232 169 aa9.76□□□□□ -0.85
PDPN-204ENST00000475043 ENPP2Q13822 863 aa9.76□□□□□ -0.85
PDPN-204ENST00000475043 KRT31Q15323 416 aa9.76□□□□□ -0.85
PDPN-204ENST00000475043 STX1AQ16623 288 aa9.76□□□□□ -0.85
PDPN-204ENST00000475043 PTPN20Q4JDL3 420 aa9.76□□□□□ -0.85
PDPN-204ENST00000475043 MS4A13Q5J8X5 152 aa9.76□□□□□ -0.85
PDPN-204ENST00000475043 PPM1JQ5JR12 505 aa9.76□□□□□ -0.85
PDPN-204ENST00000475043 CDKAL1Q5VV42 579 aa9.76□□□□□ -0.85
PDPN-204ENST00000475043 SMYD5Q6GMV2 418 aa9.76□□□□□ -0.85
PDPN-204ENST00000475043 DPY19L2P1Q6NXN4 242 aa9.76□□□□□ -0.85
PDPN-204ENST00000475043 RBM43Q6ZSC3 357 aaKnown RBP9.76□□□□□ -0.85
PDPN-204ENST00000475043 RGL4Q8IZJ4 473 aa9.76□□□□□ -0.85
PDPN-204ENST00000475043 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.76□□□□□ -0.85
PDPN-204ENST00000475043 ANKRD20A12PQ8NF67 263 aa9.76□□□□□ -0.85
PDPN-204ENST00000475043 FIBINQ8TAL6 211 aa9.76□□□□□ -0.85
PDPN-204ENST00000475043 DDX1Q92499 740 aaKnown RBP9.76□□□□□ -0.85
PDPN-204ENST00000475043 MYEOVQ96EZ4 313 aa9.76□□□□□ -0.85
PDPN-204ENST00000475043 PCMTD1Q96MG8 357 aaPredicted RBP9.76□□□□□ -0.85
PDPN-204ENST00000475043 HSPA12BQ96MM6 686 aa9.76□□□□□ -0.85
PDPN-204ENST00000475043 NUSAP1Q9BXS6 441 aaKnown RBP9.76□□□□□ -0.85
PDPN-204ENST00000475043 ANO10Q9NW15 660 aa9.76□□□□□ -0.85
PDPN-204ENST00000475043 FANCLQ9NW38 375 aa9.76□□□□□ -0.85
PDPN-204ENST00000475043 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.76□□□□□ -0.85
PDPN-204ENST00000475043 CKAP5Q14008 2032 aa9.76□□□□□ -0.85
PDPN-204ENST00000475043 F5H5T6 163 aa9.75□□□□□ -0.85
PDPN-204ENST00000475043 F8VZ95 297 aa9.75□□□□□ -0.85
PDPN-204ENST00000475043 M0QYT0 321 aa9.75□□□□□ -0.85
PDPN-204ENST00000475043 LUC7L3O95232 432 aaKnown RBP9.75□□□□□ -0.85
PDPN-204ENST00000475043 MOCS3O95396 460 aa9.75□□□□□ -0.85
PDPN-204ENST00000475043 IGLV3-25P01717 112 aa9.75□□□□□ -0.85
PDPN-204ENST00000475043 DLDP09622 509 aaKnown RBP9.75□□□□□ -0.85
PDPN-204ENST00000475043 CD6P30203 668 aa9.75□□□□□ -0.85
PDPN-204ENST00000475043 CCR1P32246 355 aa9.75□□□□□ -0.85
PDPN-204ENST00000475043 DPP6P42658 865 aa9.75□□□□□ -0.85
PDPN-204ENST00000475043 NUMBP49757 651 aa9.75□□□□□ -0.85
PDPN-204ENST00000475043 KLK7P49862 253 aa9.75□□□□□ -0.85
PDPN-204ENST00000475043 TPMTP51580 245 aa9.75□□□□□ -0.85
PDPN-204ENST00000475043 COPAP53621 1224 aa9.75□□□□□ -0.85
PDPN-204ENST00000475043 POLR2FP61218 127 aaKnown RBP9.75□□□□□ -0.85
PDPN-204ENST00000475043 ST8SIA6P61647 398 aa9.75□□□□□ -0.85
PDPN-204ENST00000475043 MYL5Q02045 173 aa9.75□□□□□ -0.85
PDPN-204ENST00000475043 LMAN2Q12907 356 aa9.75□□□□□ -0.85
PDPN-204ENST00000475043 FSCBQ5H9T9 825 aa9.75□□□□□ -0.85
PDPN-204ENST00000475043 OLFML1Q6UWY5 402 aa9.75□□□□□ -0.85
PDPN-204ENST00000475043 MMS22LQ6ZRQ5 1243 aa9.75□□□□□ -0.85
PDPN-204ENST00000475043 KIAA0907Q7Z7F0 614 aaPredicted RBP9.75□□□□□ -0.85
PDPN-204ENST00000475043 NOP9Q86U38 636 aaKnown RBP9.75□□□□□ -0.85
PDPN-204ENST00000475043 FAM124AQ86V42 546 aa9.75□□□□□ -0.85
PDPN-204ENST00000475043 ERICH1Q86X53 443 aa9.75□□□□□ -0.85
PDPN-204ENST00000475043 ZDHHC17Q8IUH5 632 aa9.75□□□□□ -0.85
PDPN-204ENST00000475043 SLC41A1Q8IVJ1 513 aa9.75□□□□□ -0.85
PDPN-204ENST00000475043 OR2T3Q8NH03 318 aa9.75□□□□□ -0.85
PDPN-204ENST00000475043 TOE1Q96GM8 510 aaKnown RBP9.75□□□□□ -0.85
PDPN-204ENST00000475043 SLC2A13Q96QE2 648 aa9.75□□□□□ -0.85
PDPN-204ENST00000475043 GPR174Q9BXC1 333 aa9.75□□□□□ -0.85
PDPN-204ENST00000475043 NAA15Q9BXJ9 866 aaKnown RBP9.75□□□□□ -0.85
PDPN-204ENST00000475043 STK33Q9BYT3 514 aa9.75□□□□□ -0.85
PDPN-204ENST00000475043 TMEM245Q9H330 911 aa9.75□□□□□ -0.85
PDPN-204ENST00000475043 NLRC4Q9NPP4 1024 aa9.75□□□□□ -0.85
PDPN-204ENST00000475043 TMEM9BQ9NQ34 198 aa9.75□□□□□ -0.85
PDPN-204ENST00000475043 ITM2CQ9NQX7 267 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms