RNA–Protein interactions for RNA: ENST00000474852.1

TPR-205, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 1 (best)

Gene TPR, Length 2,757 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-205ENST00000474852 CCR10P46092 362 aa16.74■□□□□ 0.27
TPR-205ENST00000474852 USP46P62068 366 aa16.74■□□□□ 0.27
TPR-205ENST00000474852 IGBP1P78318 339 aa16.74■□□□□ 0.27
TPR-205ENST00000474852 SNAPC2Q13487 334 aa16.74■□□□□ 0.27
TPR-205ENST00000474852 SEMA5AQ13591 1074 aa16.74■□□□□ 0.27
TPR-205ENST00000474852 OLFML2BQ68BL8 750 aa16.74■□□□□ 0.27
TPR-205ENST00000474852 SNX32Q86XE0 403 aa16.74■□□□□ 0.27
TPR-205ENST00000474852 KCNK16Q96T55 309 aa16.74■□□□□ 0.27
TPR-205ENST00000474852 COPS7BQ9H9Q2 264 aaPredicted RBP16.74■□□□□ 0.27
TPR-205ENST00000474852 SNX15Q9NRS6 342 aa16.74■□□□□ 0.27
TPR-205ENST00000474852 LZTS1Q9Y250 596 aa16.74■□□□□ 0.27
TPR-205ENST00000474852 EVPLQ92817 2033 aa16.74■□□□□ 0.27
TPR-205ENST00000474852 TFAP2AP05549 437 aa16.74■□□□□ 0.27
TPR-205ENST00000474852 GOT1P17174 413 aa16.74■□□□□ 0.27
TPR-205ENST00000474852 IRF9Q00978 393 aa16.74■□□□□ 0.27
TPR-205ENST00000474852 NADK2Q4G0N4 442 aa16.74■□□□□ 0.27
TPR-205ENST00000474852 TTC30AQ86WT1 665 aa16.74■□□□□ 0.27
TPR-205ENST00000474852 METTL25Q8N6Q8 603 aa16.74■□□□□ 0.27
TPR-205ENST00000474852 HTR3CQ8WXA8 447 aa16.74■□□□□ 0.27
TPR-205ENST00000474852 ARNTL2Q8WYA1 636 aa16.74■□□□□ 0.27
TPR-205ENST00000474852 SEPT1Q8WYJ6 367 aa16.74■□□□□ 0.27
TPR-205ENST00000474852 DTNBP1Q96EV8 351 aa16.74■□□□□ 0.27
TPR-205ENST00000474852 MARK4Q96L34 752 aa16.74■□□□□ 0.27
TPR-205ENST00000474852 BARX2Q9UMQ3 279 aaPredicted RBP16.74■□□□□ 0.27
TPR-205ENST00000474852 AP4E1Q9UPM8 1137 aa16.74■□□□□ 0.27
TPR-205ENST00000474852 PSME4Q14997 1843 aa16.74■□□□□ 0.27
TPR-205ENST00000474852 PARP14Q460N5 1801 aa16.74■□□□□ 0.27
TPR-205ENST00000474852 SYNJ2BP-COX16A0A087WUM0 186 aa16.73■□□□□ 0.27
TPR-205ENST00000474852 SMIM31A0A1B0GVY4 71 aa16.73■□□□□ 0.27
TPR-205ENST00000474852 PAPSS1O43252 624 aaPredicted RBP16.73■□□□□ 0.27
TPR-205ENST00000474852 DNAJA2O60884 412 aa16.73■□□□□ 0.27
TPR-205ENST00000474852 TRPA1O75762 1119 aa16.73■□□□□ 0.27
TPR-205ENST00000474852 PTPRAP18433 802 aa16.73■□□□□ 0.27
TPR-205ENST00000474852 TCN1P20061 433 aaPredicted RBP16.73■□□□□ 0.27
TPR-205ENST00000474852 MX2P20592 715 aa16.73■□□□□ 0.27
TPR-205ENST00000474852 ICAM3P32942 547 aa16.73■□□□□ 0.27
TPR-205ENST00000474852 PHKA2P46019 1235 aa16.73■□□□□ 0.27
TPR-205ENST00000474852 THOP1P52888 689 aa16.73■□□□□ 0.27
TPR-205ENST00000474852 OGFRL1Q5TC84 451 aaPredicted RBP16.73■□□□□ 0.27
TPR-205ENST00000474852 CCDC185Q8N715 623 aa16.73■□□□□ 0.27
TPR-205ENST00000474852 ACMSDQ8TDX5 336 aa16.73■□□□□ 0.27
TPR-205ENST00000474852 KHSRPQ92945 711 aaKnown RBP eCLIP16.73■□□□□ 0.279e-7■■□□□ 12.2
TPR-205ENST00000474852 LRGUKQ96M69 825 aa16.73■□□□□ 0.27
TPR-205ENST00000474852 AGAP3Q96P47 875 aa16.73■□□□□ 0.27
TPR-205ENST00000474852 CDRT15Q96T59 188 aa16.73■□□□□ 0.27
TPR-205ENST00000474852 PRPF18Q99633 342 aaKnown RBP16.73■□□□□ 0.27
TPR-205ENST00000474852 COX16Q9P0S2 106 aa16.73■□□□□ 0.27
TPR-205ENST00000474852 PTPRFP10586 1907 aa16.73■□□□□ 0.27
TPR-205ENST00000474852 ZBTB42B2RXF5 422 aa16.73■□□□□ 0.27
TPR-205ENST00000474852 VILLO15195 856 aa16.73■□□□□ 0.27
TPR-205ENST00000474852 ZSCAN9O15535 394 aaPredicted RBP16.73■□□□□ 0.27
TPR-205ENST00000474852 CHRNGP07510 517 aa16.73■□□□□ 0.27
TPR-205ENST00000474852 EPHA3P29320 983 aa16.73■□□□□ 0.27
TPR-205ENST00000474852 OAZ1P54368 228 aa16.73■□□□□ 0.27
TPR-205ENST00000474852 XIAPP98170 497 aa16.73■□□□□ 0.27
TPR-205ENST00000474852 TNFAIP1Q13829 316 aa16.73■□□□□ 0.27
TPR-205ENST00000474852 FLOT2Q14254 428 aa16.73■□□□□ 0.27
TPR-205ENST00000474852 FSCBQ5H9T9 825 aa16.73■□□□□ 0.27
TPR-205ENST00000474852 C6orf52Q5T4I8 152 aa16.73■□□□□ 0.27
TPR-205ENST00000474852 LCLAT1Q6UWP7 414 aa16.73■□□□□ 0.27
TPR-205ENST00000474852 DCLK2Q8N568 766 aa16.73■□□□□ 0.27
TPR-205ENST00000474852 C7orf31Q8N865 590 aa16.73■□□□□ 0.27
TPR-205ENST00000474852 PRICKLE1Q96MT3 831 aaPredicted RBP16.73■□□□□ 0.27
TPR-205ENST00000474852 CSPG4P5Q96PW8 444 aa16.73■□□□□ 0.27
TPR-205ENST00000474852 GCOM2Q9BZD3 368 aaPredicted RBP16.73■□□□□ 0.27
TPR-205ENST00000474852 RHBDL2Q9NX52 303 aa16.73■□□□□ 0.27
TPR-205ENST00000474852 MTMR10Q9NXD2 777 aa16.73■□□□□ 0.27
TPR-205ENST00000474852 HESX1Q9UBX0 185 aa16.73■□□□□ 0.27
TPR-205ENST00000474852 AP4B1Q9Y6B7 739 aa16.73■□□□□ 0.27
TPR-205ENST00000474852 PHIPQ8WWQ0 1821 aa16.73■□□□□ 0.27
TPR-205ENST00000474852 SPDYE16A6NNV3 312 aaPredicted RBP16.72■□□□□ 0.27
TPR-205ENST00000474852 STX16-NPEPL1H3BU86 382 aa16.72■□□□□ 0.27
TPR-205ENST00000474852 CASQ2O14958 399 aaPredicted RBP16.72■□□□□ 0.27
TPR-205ENST00000474852 ALDH1A2O94788 518 aa16.72■□□□□ 0.27
TPR-205ENST00000474852 CRTAMO95727 393 aa16.72■□□□□ 0.27
TPR-205ENST00000474852 ASLP04424 464 aa16.72■□□□□ 0.27
TPR-205ENST00000474852 SRGAP2BP0DMP2 458 aa16.72■□□□□ 0.27
TPR-205ENST00000474852 XRCC1P18887 633 aaPredicted RBP16.72■□□□□ 0.27
TPR-205ENST00000474852 SAT1P21673 171 aa16.72■□□□□ 0.27
TPR-205ENST00000474852 PSMB4P28070 264 aa16.72■□□□□ 0.27
TPR-205ENST00000474852 SLC6A3Q01959 620 aa16.72■□□□□ 0.27
TPR-205ENST00000474852 KLHDC10Q6PID8 442 aa16.72■□□□□ 0.27
TPR-205ENST00000474852 CCNYQ8ND76 341 aa16.72■□□□□ 0.27
TPR-205ENST00000474852 CNKSR2Q8WXI2 1034 aa16.72■□□□□ 0.27
TPR-205ENST00000474852 QKIQ96PU8 341 aaKnown RBP eCLIP16.72■□□□□ 0.27
TPR-205ENST00000474852 KCTD15Q96SI1 283 aaPredicted RBP16.72■□□□□ 0.27
TPR-205ENST00000474852 NT5C1AQ9BXI3 368 aa16.72■□□□□ 0.27
TPR-205ENST00000474852 CDH19Q9H159 772 aa16.72■□□□□ 0.27
TPR-205ENST00000474852 TCF7L2Q9NQB0 619 aa16.72■□□□□ 0.27
TPR-205ENST00000474852 TMPRSS4Q9NRS4 437 aa16.72■□□□□ 0.27
TPR-205ENST00000474852 RNF19AQ9NV58 838 aa16.72■□□□□ 0.27
TPR-205ENST00000474852 PSMD13Q9UNM6 376 aa16.72■□□□□ 0.27
TPR-205ENST00000474852 HES2Q9Y543 173 aa16.72■□□□□ 0.27
TPR-205ENST00000474852 NOP56O00567 594 aaKnown RBP16.72■□□□□ 0.27
TPR-205ENST00000474852 MDM4O15151 490 aa16.72■□□□□ 0.27
TPR-205ENST00000474852 HCRTO43612 131 aa16.72■□□□□ 0.27
TPR-205ENST00000474852 IL18RAPO95256 599 aa16.72■□□□□ 0.27
TPR-205ENST00000474852 LTFP02788 710 aa16.72■□□□□ 0.27
TPR-205ENST00000474852 P4HA1P13674 534 aa16.72■□□□□ 0.27
TPR-205ENST00000474852 ENO3P13929 434 aaPredicted RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms