RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 ZNF567Q8N184 647 aa22.36■■□□□ 1.17
CCM2-206ENST00000474617 SCAMP5Q8TAC9 235 aa22.36■■□□□ 1.17
CCM2-206ENST00000474617 MZB1Q8WU39 189 aa22.36■■□□□ 1.17
CCM2-206ENST00000474617 CDKL2Q92772 493 aa22.36■■□□□ 1.17
CCM2-206ENST00000474617 RABEP2Q9H5N1 569 aa22.36■■□□□ 1.17
CCM2-206ENST00000474617 PLXNA3P51805 1871 aa22.35■■□□□ 1.17
CCM2-206ENST00000474617 B4GALT3O60512 393 aa22.35■■□□□ 1.17
CCM2-206ENST00000474617 ALDH1A2O94788 518 aa22.35■■□□□ 1.17
CCM2-206ENST00000474617 SNRPAP09012 282 aaKnown RBP22.35■■□□□ 1.17
CCM2-206ENST00000474617 CREB1P16220 341 aa22.35■■□□□ 1.17
CCM2-206ENST00000474617 PGAM1P18669 254 aa22.35■■□□□ 1.17
CCM2-206ENST00000474617 KRT4P19013 534 aa22.35■■□□□ 1.17
CCM2-206ENST00000474617 CA4P22748 312 aa22.35■■□□□ 1.17
CCM2-206ENST00000474617 CCNCP24863 283 aa22.35■■□□□ 1.17
CCM2-206ENST00000474617 PTPN3P26045 913 aa22.35■■□□□ 1.17
CCM2-206ENST00000474617 IFNAR2P48551 515 aa22.35■■□□□ 1.17
CCM2-206ENST00000474617 GPR17Q13304 367 aa22.35■■□□□ 1.17
CCM2-206ENST00000474617 PRPSAP1Q14558 356 aa22.35■■□□□ 1.17
CCM2-206ENST00000474617 SEPT7Q16181 437 aaKnown RBP22.35■■□□□ 1.17
CCM2-206ENST00000474617 FAXCQ5TGI0 409 aa22.35■■□□□ 1.17
CCM2-206ENST00000474617 MANEALQ5VSG8 457 aa22.35■■□□□ 1.17
CCM2-206ENST00000474617 PID1Q7Z2X4 250 aa22.35■■□□□ 1.17
CCM2-206ENST00000474617 ANKRD33Q7Z3H0 272 aa22.35■■□□□ 1.17
CCM2-206ENST00000474617 LRRC34Q8IZ02 419 aa22.35■■□□□ 1.17
CCM2-206ENST00000474617 OTUD6BQ8N6M0 293 aa22.35■■□□□ 1.17
CCM2-206ENST00000474617 CFAP36Q96G28 342 aa22.35■■□□□ 1.17
CCM2-206ENST00000474617 CDK5RAP1Q96SZ6 601 aaKnown RBP22.35■■□□□ 1.17
CCM2-206ENST00000474617 GBA3Q9H227 469 aa22.35■■□□□ 1.17
CCM2-206ENST00000474617 MKS1Q9NXB0 559 aa22.35■■□□□ 1.17
CCM2-206ENST00000474617 MFHAS1Q9Y4C4 1052 aa22.35■■□□□ 1.17
CCM2-206ENST00000474617 TRIM17Q9Y577 477 aa22.35■■□□□ 1.17
CCM2-206ENST00000474617 MAGEB16A2A368 324 aa22.34■■□□□ 1.17
CCM2-206ENST00000474617 FAM159BA6NKW6 160 aa22.34■■□□□ 1.17
CCM2-206ENST00000474617 WASH4PA8MWX3 477 aa22.34■■□□□ 1.17
CCM2-206ENST00000474617 AP2A1O95782 977 aa22.34■■□□□ 1.17
CCM2-206ENST00000474617 KPNA1P52294 538 aaPredicted RBP22.34■■□□□ 1.17
CCM2-206ENST00000474617 RPL10AP62906 217 aaKnown RBP22.34■■□□□ 1.17
CCM2-206ENST00000474617 MPP2Q14168 576 aa22.34■■□□□ 1.17
CCM2-206ENST00000474617 TEX44Q53QW1 395 aa22.34■■□□□ 1.17
CCM2-206ENST00000474617 FAM171A1Q5VUB5 890 aa22.34■■□□□ 1.17
CCM2-206ENST00000474617 TIGD7Q6NT04 549 aaPredicted RBP22.34■■□□□ 1.17
CCM2-206ENST00000474617 UNC5AQ6ZN44 842 aa22.34■■□□□ 1.17
CCM2-206ENST00000474617 SCD5Q86SK9 330 aa22.34■■□□□ 1.17
CCM2-206ENST00000474617 CRIPAKQ8N1N5 446 aa22.34■■□□□ 1.17
CCM2-206ENST00000474617 LRRC43Q8N309 656 aa22.34■■□□□ 1.17
CCM2-206ENST00000474617 MGARPQ8TDB4 240 aa22.34■■□□□ 1.17
CCM2-206ENST00000474617 FATE1Q969F0 183 aa22.34■■□□□ 1.17
CCM2-206ENST00000474617 TOX2Q96NM4 488 aa22.34■■□□□ 1.17
CCM2-206ENST00000474617 TGS1Q96RS0 853 aaKnown RBP22.34■■□□□ 1.17
CCM2-206ENST00000474617 ANLNQ9NQW6 1124 aa22.34■■□□□ 1.17
CCM2-206ENST00000474617 TMPRSS4Q9NRS4 437 aa22.34■■□□□ 1.17
CCM2-206ENST00000474617 DNAJB4Q9UDY4 337 aa22.34■■□□□ 1.17
CCM2-206ENST00000474617 KCNU1A8MYU2 1149 aa22.33■■□□□ 1.17
CCM2-206ENST00000474617 I6L893 689 aaPredicted RBP22.33■■□□□ 1.17
CCM2-206ENST00000474617 AVILO75366 819 aa22.33■■□□□ 1.17
CCM2-206ENST00000474617 RABGGTBP53611 331 aa22.33■■□□□ 1.17
CCM2-206ENST00000474617 SLC18A2Q05940 514 aa22.33■■□□□ 1.17
CCM2-206ENST00000474617 PDK4Q16654 411 aa22.33■■□□□ 1.17
CCM2-206ENST00000474617 HHATQ5VTY9 493 aa22.33■■□□□ 1.17
CCM2-206ENST00000474617 CCDC121Q6ZUS5 278 aa22.33■■□□□ 1.17
CCM2-206ENST00000474617 KLHDC8BQ8IXV7 354 aa22.33■■□□□ 1.17
CCM2-206ENST00000474617 RETREG1Q9H6L5 497 aa22.33■■□□□ 1.17
CCM2-206ENST00000474617 ACTR5Q9H9F9 607 aaPredicted RBP22.33■■□□□ 1.17
CCM2-206ENST00000474617 MOCS1Q9NZB8 636 aa22.33■■□□□ 1.17
CCM2-206ENST00000474617 MAD1L1Q9Y6D9 718 aa22.33■■□□□ 1.17
CCM2-206ENST00000474617 TCP11X1B4DZS4 312 aa22.32■■□□□ 1.16
CCM2-206ENST00000474617 C1QAP02745 245 aa22.32■■□□□ 1.16
CCM2-206ENST00000474617 ALADP13716 330 aa22.32■■□□□ 1.16
CCM2-206ENST00000474617 GPNMBQ14956 572 aa22.32■■□□□ 1.16
CCM2-206ENST00000474617 QPCTQ16769 361 aa22.32■■□□□ 1.16
CCM2-206ENST00000474617 FUT10Q6P4F1 479 aa22.32■■□□□ 1.16
CCM2-206ENST00000474617 LINC00523Q86TU6 105 aa22.32■■□□□ 1.16
CCM2-206ENST00000474617 ZNF276Q8N554 614 aa22.32■■□□□ 1.16
CCM2-206ENST00000474617 PDCD7Q8N8D1 485 aaKnown RBP22.32■■□□□ 1.16
CCM2-206ENST00000474617 BANPQ8N9N5 519 aa22.32■■□□□ 1.16
CCM2-206ENST00000474617 VPS11Q9H270 941 aa22.32■■□□□ 1.16
CCM2-206ENST00000474617 KDM4CQ9H3R0 1056 aa22.32■■□□□ 1.16
CCM2-206ENST00000474617 LRRC40Q9H9A6 602 aa22.32■■□□□ 1.16
CCM2-206ENST00000474617 TLR8Q9NR97 1041 aaKnown RBP22.32■■□□□ 1.16
CCM2-206ENST00000474617 SEPT10Q9P0V9 454 aa22.32■■□□□ 1.16
CCM2-206ENST00000474617 TANC1Q9C0D5 1861 aa22.32■■□□□ 1.16
CCM2-206ENST00000474617 F8W810 466 aa22.31■■□□□ 1.16
CCM2-206ENST00000474617 TBC1D4O60343 1298 aa22.31■■□□□ 1.16
CCM2-206ENST00000474617 SNX3O60493 162 aa22.31■■□□□ 1.16
CCM2-206ENST00000474617 PAGE1O75459 146 aa22.31■■□□□ 1.16
CCM2-206ENST00000474617 YWHAQP27348 245 aa22.31■■□□□ 1.16
CCM2-206ENST00000474617 PSMB4P28070 264 aa22.31■■□□□ 1.16
CCM2-206ENST00000474617 NPY2RP49146 381 aa22.31■■□□□ 1.16
CCM2-206ENST00000474617 TTC3P53804 2025 aa22.31■■□□□ 1.16
CCM2-206ENST00000474617 LRRC14Q15048 493 aa22.31■■□□□ 1.16
CCM2-206ENST00000474617 SPANXN3Q5MJ09 141 aa22.31■■□□□ 1.16
CCM2-206ENST00000474617 C1orf53Q5VUE5 145 aa22.31■■□□□ 1.16
CCM2-206ENST00000474617 AGGF1Q8N302 714 aaeCLIP22.31■■□□□ 1.16
CCM2-206ENST00000474617 GBP7Q8N8V2 638 aaPredicted RBP22.31■■□□□ 1.16
CCM2-206ENST00000474617 APOPT1Q96IL0 206 aa22.31■■□□□ 1.16
CCM2-206ENST00000474617 TEKT5Q96M29 485 aa22.31■■□□□ 1.16
CCM2-206ENST00000474617 UNC93B1Q9H1C4 597 aa22.31■■□□□ 1.16
CCM2-206ENST00000474617 BFARQ9NZS9 450 aa22.31■■□□□ 1.16
CCM2-206ENST00000474617 PPARGC1AQ9UBK2 798 aaKnown RBP22.31■■□□□ 1.16
CCM2-206ENST00000474617 AAR2Q9Y312 384 aaKnown RBP22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms