RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 KDM4FA0A1W2PPD8 638 aa19.07■□□□□ 0.64
ECHDC1-214ENST00000474289 E2F8A0AVK6 867 aa19.07■□□□□ 0.64
ECHDC1-214ENST00000474289 FUOMA2VDF0 154 aa19.07■□□□□ 0.64
ECHDC1-214ENST00000474289 ACOT8O14734 319 aa19.07■□□□□ 0.64
ECHDC1-214ENST00000474289 AMHP03971 560 aa19.07■□□□□ 0.64
ECHDC1-214ENST00000474289 P4HA1P13674 534 aa19.07■□□□□ 0.64
ECHDC1-214ENST00000474289 CCDC130P13994 396 aa19.07■□□□□ 0.64
ECHDC1-214ENST00000474289 EIF2AK2P19525 551 aaKnown RBP19.07■□□□□ 0.64
ECHDC1-214ENST00000474289 TCF7P36402 384 aaPredicted RBP19.07■□□□□ 0.64
ECHDC1-214ENST00000474289 RAB6CQ53S08 254 aa19.07■□□□□ 0.64
ECHDC1-214ENST00000474289 SH3PXD2AQ5TCZ1 1133 aa19.07■□□□□ 0.64
ECHDC1-214ENST00000474289 NAPRTQ6XQN6 538 aa19.07■□□□□ 0.64
ECHDC1-214ENST00000474289 SCARA5Q6ZMJ2 495 aa19.07■□□□□ 0.64
ECHDC1-214ENST00000474289 CYP4V2Q6ZWL3 525 aaPredicted RBP19.07■□□□□ 0.64
ECHDC1-214ENST00000474289 XYLT1Q86Y38 959 aa19.07■□□□□ 0.64
ECHDC1-214ENST00000474289 PGAM4Q8N0Y7 254 aa19.07■□□□□ 0.64
ECHDC1-214ENST00000474289 MASTLQ96GX5 879 aa19.07■□□□□ 0.64
ECHDC1-214ENST00000474289 CNDP1Q96KN2 507 aa19.07■□□□□ 0.64
ECHDC1-214ENST00000474289 ACO2Q99798 780 aaKnown RBP19.07■□□□□ 0.64
ECHDC1-214ENST00000474289 TMEM79Q9BSE2 394 aa19.07■□□□□ 0.64
ECHDC1-214ENST00000474289 MSTO1Q9BUK6 570 aa19.07■□□□□ 0.64
ECHDC1-214ENST00000474289 OSBPL11Q9BXB4 747 aa19.07■□□□□ 0.64
ECHDC1-214ENST00000474289 RAB6CQ9H0N0 254 aa19.07■□□□□ 0.64
ECHDC1-214ENST00000474289 PNPLA3Q9NST1 481 aa19.07■□□□□ 0.64
ECHDC1-214ENST00000474289 PSAT1Q9Y617 370 aa19.07■□□□□ 0.64
ECHDC1-214ENST00000474289 TMEM247A6NEH6 219 aa19.06■□□□□ 0.64
ECHDC1-214ENST00000474289 TMX2-CTNND1H3BSU7 103 aa19.06■□□□□ 0.64
ECHDC1-214ENST00000474289 MATN2O00339 956 aa19.06■□□□□ 0.64
ECHDC1-214ENST00000474289 ENTPD3O75355 529 aa19.06■□□□□ 0.64
ECHDC1-214ENST00000474289 METTL18O95568 372 aa19.06■□□□□ 0.64
ECHDC1-214ENST00000474289 HSPA4LO95757 839 aa19.06■□□□□ 0.64
ECHDC1-214ENST00000474289 IKBKEQ14164 716 aa19.06■□□□□ 0.64
ECHDC1-214ENST00000474289 SLC15A3Q8IY34 581 aa19.06■□□□□ 0.64
ECHDC1-214ENST00000474289 CPNE9Q8IYJ1 553 aa19.06■□□□□ 0.64
ECHDC1-214ENST00000474289 TNS4Q8IZW8 715 aa19.06■□□□□ 0.64
ECHDC1-214ENST00000474289 FAM156AQ8NDB6 213 aa19.06■□□□□ 0.64
ECHDC1-214ENST00000474289 MCPH1Q8NEM0 835 aa19.06■□□□□ 0.64
ECHDC1-214ENST00000474289 ATP6V1E2Q96A05 226 aa19.06■□□□□ 0.64
ECHDC1-214ENST00000474289 C12orf43Q96C57 262 aaKnown RBP19.06■□□□□ 0.64
ECHDC1-214ENST00000474289 RNF157Q96PX1 679 aa19.06■□□□□ 0.64
ECHDC1-214ENST00000474289 WDR55Q9H6Y2 383 aaPredicted RBP19.06■□□□□ 0.64
ECHDC1-214ENST00000474289 WDR41Q9HAD4 459 aa19.06■□□□□ 0.64
ECHDC1-214ENST00000474289 PDLIM7Q9NR12 457 aa19.06■□□□□ 0.64
ECHDC1-214ENST00000474289 COQ6Q9Y2Z9 468 aa19.06■□□□□ 0.64
ECHDC1-214ENST00000474289 H0YJX3 145 aa19.06■□□□□ 0.64
ECHDC1-214ENST00000474289 E2F6O75461 281 aa19.06■□□□□ 0.64
ECHDC1-214ENST00000474289 ERBB2P04626 1255 aa19.06■□□□□ 0.64
ECHDC1-214ENST00000474289 NPR1P16066 1061 aa19.06■□□□□ 0.64
ECHDC1-214ENST00000474289 TCN1P20061 433 aaPredicted RBP19.06■□□□□ 0.64
ECHDC1-214ENST00000474289 MYL6P60660 151 aa19.06■□□□□ 0.64
ECHDC1-214ENST00000474289 KRT76Q01546 638 aa19.06■□□□□ 0.64
ECHDC1-214ENST00000474289 NIPAL4Q0D2K0 466 aa19.06■□□□□ 0.64
ECHDC1-214ENST00000474289 FASTKD5Q7L8L6 764 aaKnown RBP19.06■□□□□ 0.64
ECHDC1-214ENST00000474289 MYO1HQ8N1T3 1032 aa19.06■□□□□ 0.64
ECHDC1-214ENST00000474289 PQLC3Q8N755 202 aa19.06■□□□□ 0.64
ECHDC1-214ENST00000474289 SLC4A11Q8NBS3 891 aa19.06■□□□□ 0.64
ECHDC1-214ENST00000474289 RP9Q8TA86 221 aaKnown RBP19.06■□□□□ 0.64
ECHDC1-214ENST00000474289 ADAM32Q8TC27 787 aa19.06■□□□□ 0.64
ECHDC1-214ENST00000474289 PAIP1Q9H074 479 aaKnown RBP19.06■□□□□ 0.64
ECHDC1-214ENST00000474289 VPS45Q9NRW7 570 aa19.06■□□□□ 0.64
ECHDC1-214ENST00000474289 ZNF219Q9P2Y4 722 aaPredicted RBP19.06■□□□□ 0.64
ECHDC1-214ENST00000474289 GABBR1Q9UBS5 961 aa19.06■□□□□ 0.64
ECHDC1-214ENST00000474289 AFG3L2Q9Y4W6 797 aa19.06■□□□□ 0.64
ECHDC1-214ENST00000474289 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.06■□□□□ 0.64
ECHDC1-214ENST00000474289 RBM47A0AV96 593 aaKnown RBP19.05■□□□□ 0.64
ECHDC1-214ENST00000474289 DGAT1O75907 488 aa19.05■□□□□ 0.64
ECHDC1-214ENST00000474289 CSPG5O95196 566 aa19.05■□□□□ 0.64
ECHDC1-214ENST00000474289 YWHAEP62258 255 aaKnown RBP19.05■□□□□ 0.64
ECHDC1-214ENST00000474289 DPYSQ14117 519 aa19.05■□□□□ 0.64
ECHDC1-214ENST00000474289 SMAD1Q15797 465 aaKnown RBP19.05■□□□□ 0.64
ECHDC1-214ENST00000474289 GPR141Q7Z602 305 aa19.05■□□□□ 0.64
ECHDC1-214ENST00000474289 FIBCD1Q8N539 461 aa19.05■□□□□ 0.64
ECHDC1-214ENST00000474289 ZSCAN18Q8TBC5 510 aaPredicted RBP19.05■□□□□ 0.64
ECHDC1-214ENST00000474289 PPP1R36Q96LQ0 422 aa19.05■□□□□ 0.64
ECHDC1-214ENST00000474289 NIF3L1Q9GZT8 377 aa19.05■□□□□ 0.64
ECHDC1-214ENST00000474289 ANLNQ9NQW6 1124 aa19.05■□□□□ 0.64
ECHDC1-214ENST00000474289 NEMP1O14524 444 aa19.05■□□□□ 0.64
ECHDC1-214ENST00000474289 ADAM23O75077 832 aa19.05■□□□□ 0.64
ECHDC1-214ENST00000474289 STBD1O95210 358 aa19.05■□□□□ 0.64
ECHDC1-214ENST00000474289 BMP10O95393 424 aa19.05■□□□□ 0.64
ECHDC1-214ENST00000474289 HMGCRP04035 888 aa19.05■□□□□ 0.64
ECHDC1-214ENST00000474289 MYCLP12524 364 aaPredicted RBP19.05■□□□□ 0.64
ECHDC1-214ENST00000474289 ZNF24P17028 368 aa19.05■□□□□ 0.64
ECHDC1-214ENST00000474289 MX2P20592 715 aa19.05■□□□□ 0.64
ECHDC1-214ENST00000474289 FGFR3P22607 806 aa19.05■□□□□ 0.64
ECHDC1-214ENST00000474289 INSCQ1MX18 579 aa19.05■□□□□ 0.64
ECHDC1-214ENST00000474289 DCDC5Q6ZRR9 648 aa19.05■□□□□ 0.64
ECHDC1-214ENST00000474289 CDAN1Q8IWY9 1227 aa19.05■□□□□ 0.64
ECHDC1-214ENST00000474289 TDRD5Q8NAT2 981 aaKnown RBP19.05■□□□□ 0.64
ECHDC1-214ENST00000474289 CLEC4DQ8WXI8 215 aa19.05■□□□□ 0.64
ECHDC1-214ENST00000474289 HNRNPABQ99729 332 aaKnown RBP19.05■□□□□ 0.64
ECHDC1-214ENST00000474289 CLRN2A0PK11 232 aa19.04■□□□□ 0.64
ECHDC1-214ENST00000474289 BCLAF3A2AJT9 711 aaKnown RBP19.04■□□□□ 0.64
ECHDC1-214ENST00000474289 WDR27A2RRH5 827 aa19.04■□□□□ 0.64
ECHDC1-214ENST00000474289 HTR3EA5X5Y0 456 aa19.04■□□□□ 0.64
ECHDC1-214ENST00000474289 PSMD12O00232 456 aaPredicted RBP19.04■□□□□ 0.64
ECHDC1-214ENST00000474289 PLOD2O00469 737 aa19.04■□□□□ 0.64
ECHDC1-214ENST00000474289 ALDH1A2O94788 518 aa19.04■□□□□ 0.64
ECHDC1-214ENST00000474289 CD19P15391 556 aa19.04■□□□□ 0.64
ECHDC1-214ENST00000474289 RPL10P27635 214 aaKnown RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms