RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 ZMYND11Q15326 602 aa6.28□□□□□ -1.4
SMARCE1-208ENST00000474246 EFHC1Q5JVL4 640 aa6.28□□□□□ -1.4
SMARCE1-208ENST00000474246 GKAP1Q5VSY0 366 aaPredicted RBP6.28□□□□□ -1.4
SMARCE1-208ENST00000474246 RNF220Q5VTB9 566 aa6.28□□□□□ -1.4
SMARCE1-208ENST00000474246 ZCCHC12Q6PEW1 402 aa6.28□□□□□ -1.4
SMARCE1-208ENST00000474246 LRRC31Q6UY01 552 aa6.28□□□□□ -1.4
SMARCE1-208ENST00000474246 ADGRG6Q86SQ4 1221 aa6.28□□□□□ -1.4
SMARCE1-208ENST00000474246 SLC51BQ86UW2 128 aa6.28□□□□□ -1.4
SMARCE1-208ENST00000474246 ZDHHC17Q8IUH5 632 aa6.28□□□□□ -1.4
SMARCE1-208ENST00000474246 PLD6Q8N2A8 252 aaKnown RBP6.28□□□□□ -1.4
SMARCE1-208ENST00000474246 ARFGAP2Q8N6H7 521 aa6.28□□□□□ -1.4
SMARCE1-208ENST00000474246 PPP1R35Q8TAP8 253 aa6.28□□□□□ -1.4
SMARCE1-208ENST00000474246 AUTS2Q8WXX7 1259 aa6.28□□□□□ -1.4
SMARCE1-208ENST00000474246 IRGQQ8WZA9 623 aa6.28□□□□□ -1.4
SMARCE1-208ENST00000474246 TMA16Q96EY4 203 aaKnown RBP6.28□□□□□ -1.4
SMARCE1-208ENST00000474246 CYFIP2Q96F07 1278 aa6.28□□□□□ -1.4
SMARCE1-208ENST00000474246 CHMP6Q96FZ7 201 aa6.28□□□□□ -1.4
SMARCE1-208ENST00000474246 CALML4Q96GE6 196 aa6.28□□□□□ -1.4
SMARCE1-208ENST00000474246 TMEM68Q96MH6 324 aa6.28□□□□□ -1.4
SMARCE1-208ENST00000474246 WRNIP1Q96S55 665 aa6.28□□□□□ -1.4
SMARCE1-208ENST00000474246 DMRTA2Q96SC8 542 aa6.28□□□□□ -1.4
SMARCE1-208ENST00000474246 RAD9AQ99638 391 aa6.28□□□□□ -1.4
SMARCE1-208ENST00000474246 METTL22Q9BUU2 404 aaPredicted RBP6.28□□□□□ -1.4
SMARCE1-208ENST00000474246 MLPHQ9BV36 600 aaPredicted RBP6.28□□□□□ -1.4
SMARCE1-208ENST00000474246 ZFAND3Q9H8U3 227 aa6.28□□□□□ -1.4
SMARCE1-208ENST00000474246 TUFT1Q9NNX1 390 aa6.28□□□□□ -1.4
SMARCE1-208ENST00000474246 NRIP3Q9NQ35 241 aa6.28□□□□□ -1.4
SMARCE1-208ENST00000474246 EIF2B3Q9NR50 452 aaKnown RBP6.28□□□□□ -1.4
SMARCE1-208ENST00000474246 PGPEP1Q9NXJ5 209 aa6.28□□□□□ -1.4
SMARCE1-208ENST00000474246 SLC7A8Q9UHI5 535 aa6.28□□□□□ -1.4
SMARCE1-208ENST00000474246 BAIAP2L1Q9UHR4 511 aa6.28□□□□□ -1.4
SMARCE1-208ENST00000474246 IPO11Q9UI26 975 aaKnown RBP6.28□□□□□ -1.4
SMARCE1-208ENST00000474246 MAP2P11137 1827 aaKnown RBP6.28□□□□□ -1.4
SMARCE1-208ENST00000474246 ANKRD17O75179 2603 aaKnown RBP6.27□□□□□ -1.4
SMARCE1-208ENST00000474246 CENPFP49454 3210 aa6.27□□□□□ -1.41
SMARCE1-208ENST00000474246 CFAP47Q6ZTR5 3102 aa6.27□□□□□ -1.41
SMARCE1-208ENST00000474246 COL5A3P25940 1745 aaPredicted RBP6.27□□□□□ -1.41
SMARCE1-208ENST00000474246 PTPDC1A2A3K4 754 aa6.27□□□□□ -1.41
SMARCE1-208ENST00000474246 UBE2Q2LH0YL09 131 aa6.27□□□□□ -1.41
SMARCE1-208ENST00000474246 CXCL11O14625 94 aa6.27□□□□□ -1.41
SMARCE1-208ENST00000474246 PPEF2O14830 753 aa6.27□□□□□ -1.41
SMARCE1-208ENST00000474246 GCNT3O95395 438 aa6.27□□□□□ -1.41
SMARCE1-208ENST00000474246 GNA14O95837 355 aa6.27□□□□□ -1.41
SMARCE1-208ENST00000474246 APOEP02649 317 aa6.27□□□□□ -1.41
SMARCE1-208ENST00000474246 CYP1A1P04798 512 aaPredicted RBP6.27□□□□□ -1.41
SMARCE1-208ENST00000474246 JMJD7P0C870 316 aa6.27□□□□□ -1.41
SMARCE1-208ENST00000474246 CCDC166P0CW27 439 aa6.27□□□□□ -1.41
SMARCE1-208ENST00000474246 PRPS2P11908 318 aa6.27□□□□□ -1.41
SMARCE1-208ENST00000474246 KRT5P13647 590 aa6.27□□□□□ -1.41
SMARCE1-208ENST00000474246 CHN1P15882 459 aa6.27□□□□□ -1.41
SMARCE1-208ENST00000474246 TIMP2P16035 220 aa6.27□□□□□ -1.41
SMARCE1-208ENST00000474246 MLH1P40692 756 aa6.27□□□□□ -1.41
SMARCE1-208ENST00000474246 ME1P48163 572 aa6.27□□□□□ -1.41
SMARCE1-208ENST00000474246 AMPHP49418 695 aa6.27□□□□□ -1.41
SMARCE1-208ENST00000474246 GATMP50440 423 aa6.27□□□□□ -1.41
SMARCE1-208ENST00000474246 ATP12AP54707 1039 aa6.27□□□□□ -1.41
SMARCE1-208ENST00000474246 STK4Q13043 487 aa6.27□□□□□ -1.41
SMARCE1-208ENST00000474246 DYNC1I2Q13409 638 aaKnown RBP6.27□□□□□ -1.41
SMARCE1-208ENST00000474246 COL9A3Q14050 684 aaPredicted RBP6.27□□□□□ -1.41
SMARCE1-208ENST00000474246 RCN2Q14257 317 aa6.27□□□□□ -1.41
SMARCE1-208ENST00000474246 PFKFB4Q16877 469 aa6.27□□□□□ -1.41
SMARCE1-208ENST00000474246 ZACNQ401N2 412 aa6.27□□□□□ -1.41
SMARCE1-208ENST00000474246 RASIP1Q5U651 963 aa6.27□□□□□ -1.41
SMARCE1-208ENST00000474246 GTF2IRD2BQ6EKJ0 949 aa6.27□□□□□ -1.41
SMARCE1-208ENST00000474246 MTFR2Q6P444 385 aa6.27□□□□□ -1.41
SMARCE1-208ENST00000474246 STXBP4Q6ZWJ1 553 aa6.27□□□□□ -1.41
SMARCE1-208ENST00000474246 GTF2IRD2Q86UP8 949 aa6.27□□□□□ -1.41
SMARCE1-208ENST00000474246 METTL23Q86XA0 190 aa6.27□□□□□ -1.41
SMARCE1-208ENST00000474246 TUSC5Q8IXB3 177 aa6.27□□□□□ -1.41
SMARCE1-208ENST00000474246 SYCE1Q8N0S2 351 aa6.27□□□□□ -1.41
SMARCE1-208ENST00000474246 PHOSPHO2Q8TCD6 241 aa6.27□□□□□ -1.41
SMARCE1-208ENST00000474246 PIGBQ92521 554 aa6.27□□□□□ -1.41
SMARCE1-208ENST00000474246 STAMQ92783 540 aa6.27□□□□□ -1.41
SMARCE1-208ENST00000474246 VWCEQ96DN2 955 aa6.27□□□□□ -1.41
SMARCE1-208ENST00000474246 TSNARE1Q96NA8 513 aa6.27□□□□□ -1.41
SMARCE1-208ENST00000474246 TUBGCP5Q96RT8 1024 aa6.27□□□□□ -1.41
SMARCE1-208ENST00000474246 ZCCHC2Q9C0B9 1178 aaKnown RBP6.27□□□□□ -1.41
SMARCE1-208ENST00000474246 AP5M1Q9H0R1 490 aa6.27□□□□□ -1.41
SMARCE1-208ENST00000474246 PRDM12Q9H4Q4 367 aa6.27□□□□□ -1.41
SMARCE1-208ENST00000474246 CNTD2Q9H8S5 307 aa6.27□□□□□ -1.41
SMARCE1-208ENST00000474246 KCND1Q9NSA2 647 aa6.27□□□□□ -1.41
SMARCE1-208ENST00000474246 DDX28Q9NUL7 540 aaKnown RBP6.27□□□□□ -1.41
SMARCE1-208ENST00000474246 LARSQ9P2J5 1176 aaKnown RBP6.27□□□□□ -1.41
SMARCE1-208ENST00000474246 SEC63Q9UGP8 760 aaKnown RBP6.27□□□□□ -1.41
SMARCE1-208ENST00000474246 CIDEBQ9UHD4 219 aa6.27□□□□□ -1.41
SMARCE1-208ENST00000474246 FBXL21Q9UKT6 434 aa6.27□□□□□ -1.41
SMARCE1-208ENST00000474246 CNOT11Q9UKZ1 510 aaKnown RBP6.27□□□□□ -1.41
SMARCE1-208ENST00000474246 CFAP54Q96N23 3096 aa6.27□□□□□ -1.41
SMARCE1-208ENST00000474246 LOC100506127A0A0U1RQW1 187 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 TMEM229AB2RXF0 380 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 CDK2AP1O14519 115 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 ATP2A1O14983 1001 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 BIRC5O15392 142 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 CD3EAPO15446 510 aaKnown RBP6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 TBC1D4O60343 1298 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 SURF6O75683 361 aaKnown RBP6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 DGAT1O75907 488 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 HMOX1P09601 288 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms