RNA–Protein interactions for RNA: ENST00000473252.5

C9orf85-204, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 5

Gene C9orf85, Length 678 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-204ENST00000473252 DLL3Q9NYJ7 618 aa13.11□□□□□ -0.31
C9orf85-204ENST00000473252 CALCOCO1Q9P1Z2 691 aa13.11□□□□□ -0.31
C9orf85-204ENST00000473252 TMEM59LQ9UK28 342 aa13.11□□□□□ -0.31
C9orf85-204ENST00000473252 A0A1B0GVM2 712 aa13.1□□□□□ -0.31
C9orf85-204ENST00000473252 BCLAF3A2AJT9 711 aaKnown RBP13.1□□□□□ -0.31
C9orf85-204ENST00000473252 TCAF2A6NFQ2 919 aa13.1□□□□□ -0.31
C9orf85-204ENST00000473252 WASH3PC4AMC7 463 aa13.1□□□□□ -0.31
C9orf85-204ENST00000473252 H0Y626 953 aa13.1□□□□□ -0.31
C9orf85-204ENST00000473252 DCLK1O15075 740 aa13.1□□□□□ -0.31
C9orf85-204ENST00000473252 SRPRAP08240 638 aaKnown RBP13.1□□□□□ -0.31
C9orf85-204ENST00000473252 ATP1A3P13637 1013 aa13.1□□□□□ -0.31
C9orf85-204ENST00000473252 FERP16591 822 aa13.1□□□□□ -0.31
C9orf85-204ENST00000473252 NDUFV2P19404 249 aa13.1□□□□□ -0.31
C9orf85-204ENST00000473252 HOXD12P35452 270 aa13.1□□□□□ -0.31
C9orf85-204ENST00000473252 MPLP40238 635 aa13.1□□□□□ -0.31
C9orf85-204ENST00000473252 CXCR3P49682 368 aa13.1□□□□□ -0.31
C9orf85-204ENST00000473252 PLK1P53350 603 aa13.1□□□□□ -0.31
C9orf85-204ENST00000473252 LIMK1P53667 647 aa13.1□□□□□ -0.31
C9orf85-204ENST00000473252 RPS24P62847 133 aaKnown RBP13.1□□□□□ -0.31
C9orf85-204ENST00000473252 PITX1P78337 314 aaPredicted RBP13.1□□□□□ -0.31
C9orf85-204ENST00000473252 CENPCQ03188 943 aa13.1□□□□□ -0.31
C9orf85-204ENST00000473252 CAMK2GQ13555 558 aaPredicted RBP13.1□□□□□ -0.31
C9orf85-204ENST00000473252 ARID5BQ14865 1188 aa13.1□□□□□ -0.31
C9orf85-204ENST00000473252 IQCB1Q15051 598 aa13.1□□□□□ -0.31
C9orf85-204ENST00000473252 FUT11Q495W5 492 aa13.1□□□□□ -0.31
C9orf85-204ENST00000473252 NAA35Q5VZE5 725 aa13.1□□□□□ -0.31
C9orf85-204ENST00000473252 RAP1GAP2Q684P5 730 aa13.1□□□□□ -0.31
C9orf85-204ENST00000473252 ERMP1Q7Z2K6 904 aa13.1□□□□□ -0.31
C9orf85-204ENST00000473252 BNIPLQ7Z465 357 aa13.1□□□□□ -0.31
C9orf85-204ENST00000473252 LGI2Q8N0V4 545 aa13.1□□□□□ -0.31
C9orf85-204ENST00000473252 NETO1Q8TDF5 533 aa13.1□□□□□ -0.31
C9orf85-204ENST00000473252 CPA5Q8WXQ8 436 aa13.1□□□□□ -0.31
C9orf85-204ENST00000473252 C1orf74Q96LT6 269 aa13.1□□□□□ -0.31
C9orf85-204ENST00000473252 EDEM3Q9BZQ6 932 aa13.1□□□□□ -0.31
C9orf85-204ENST00000473252 PRDM16Q9HAZ2 1276 aa13.1□□□□□ -0.31
C9orf85-204ENST00000473252 STIM2Q9P246 746 aa13.1□□□□□ -0.31
C9orf85-204ENST00000473252 DOCK4Q8N1I0 1966 aa13.09□□□□□ -0.31
C9orf85-204ENST00000473252 A0A1B0GTH6 734 aa13.09□□□□□ -0.31
C9orf85-204ENST00000473252 ENDOD1O94919 500 aa13.09□□□□□ -0.31
C9orf85-204ENST00000473252 EPHX1P07099 455 aa13.09□□□□□ -0.31
C9orf85-204ENST00000473252 CHRNB2P17787 502 aa13.09□□□□□ -0.31
C9orf85-204ENST00000473252 OXTRP30559 389 aa13.09□□□□□ -0.31
C9orf85-204ENST00000473252 CD70P32970 193 aa13.09□□□□□ -0.31
C9orf85-204ENST00000473252 SULT1E1P49888 294 aa13.09□□□□□ -0.31
C9orf85-204ENST00000473252 ST8SIA6P61647 398 aa13.09□□□□□ -0.31
C9orf85-204ENST00000473252 FOXK2Q01167 660 aa13.09□□□□□ -0.31
C9orf85-204ENST00000473252 CREB5Q02930 508 aa13.09□□□□□ -0.31
C9orf85-204ENST00000473252 ZBTB16Q05516 673 aa13.09□□□□□ -0.31
C9orf85-204ENST00000473252 DEUP1Q05D60 604 aa13.09□□□□□ -0.31
C9orf85-204ENST00000473252 SULT2A1Q06520 285 aa13.09□□□□□ -0.31
C9orf85-204ENST00000473252 LMAN2Q12907 356 aa13.09□□□□□ -0.31
C9orf85-204ENST00000473252 NME3Q13232 169 aa13.09□□□□□ -0.31
C9orf85-204ENST00000473252 PTPRNQ16849 979 aa13.09□□□□□ -0.31
C9orf85-204ENST00000473252 PHF13Q86YI8 300 aaPredicted RBP13.09□□□□□ -0.31
C9orf85-204ENST00000473252 TMPRSS6Q8IU80 811 aa13.09□□□□□ -0.31
C9orf85-204ENST00000473252 CARNMT1Q8N4J0 409 aa13.09□□□□□ -0.31
C9orf85-204ENST00000473252 C12orf50Q8NA57 414 aaPredicted RBP13.09□□□□□ -0.31
C9orf85-204ENST00000473252 OR2T3Q8NH03 318 aa13.09□□□□□ -0.31
C9orf85-204ENST00000473252 WFDC5Q8TCV5 224 aa13.09□□□□□ -0.31
C9orf85-204ENST00000473252 SLC20A1Q8WUM9 679 aa13.09□□□□□ -0.31
C9orf85-204ENST00000473252 RLN3Q8WXF3 142 aa13.09□□□□□ -0.31
C9orf85-204ENST00000473252 PRCCQ92733 491 aaPredicted RBP13.09□□□□□ -0.31
C9orf85-204ENST00000473252 RTKNQ9BST9 563 aa13.09□□□□□ -0.31
C9orf85-204ENST00000473252 ITM2CQ9NQX7 267 aa13.09□□□□□ -0.31
C9orf85-204ENST00000473252 USP36Q9P275 1121 aaKnown RBP13.09□□□□□ -0.31
C9orf85-204ENST00000473252 XPO7Q9UIA9 1087 aaKnown RBP13.09□□□□□ -0.31
C9orf85-204ENST00000473252 RAD54BQ9Y620 910 aa13.09□□□□□ -0.31
C9orf85-204ENST00000473252 EP300Q09472 2414 aaPredicted RBP13.08□□□□□ -0.32
C9orf85-204ENST00000473252 IGHV1OR15-9A0A0B4J2B8 117 aa13.08□□□□□ -0.32
C9orf85-204ENST00000473252 CLDN11O75508 207 aa13.08□□□□□ -0.32
C9orf85-204ENST00000473252 IGLV3-19P01714 112 aa13.08□□□□□ -0.32
C9orf85-204ENST00000473252 CALB1P05937 261 aa13.08□□□□□ -0.32
C9orf85-204ENST00000473252 BCKDHBP21953 392 aa13.08□□□□□ -0.32
C9orf85-204ENST00000473252 PRKCHP24723 683 aa13.08□□□□□ -0.32
C9orf85-204ENST00000473252 NSFP46459 744 aaKnown RBP13.08□□□□□ -0.32
C9orf85-204ENST00000473252 COPAP53621 1224 aa13.08□□□□□ -0.32
C9orf85-204ENST00000473252 RNASE9P60153 205 aaKnown RBP13.08□□□□□ -0.32
C9orf85-204ENST00000473252 AUHQ13825 339 aaKnown RBP13.08□□□□□ -0.32
C9orf85-204ENST00000473252 FNDC3BQ53EP0 1204 aaKnown RBP13.08□□□□□ -0.32
C9orf85-204ENST00000473252 FIGNQ5HY92 759 aa13.08□□□□□ -0.32
C9orf85-204ENST00000473252 PEAR1Q5VY43 1037 aaPredicted RBP13.08□□□□□ -0.32
C9orf85-204ENST00000473252 FBXL22Q6P050 247 aa13.08□□□□□ -0.32
C9orf85-204ENST00000473252 CYP2U1Q7Z449 544 aa13.08□□□□□ -0.32
C9orf85-204ENST00000473252 RABEPKQ7Z6M1 372 aa13.08□□□□□ -0.32
C9orf85-204ENST00000473252 CCAR2Q8N163 923 aaKnown RBP13.08□□□□□ -0.32
C9orf85-204ENST00000473252 CFAP52Q8N1V2 620 aa13.08□□□□□ -0.32
C9orf85-204ENST00000473252 RMDN1Q96DB5 314 aa13.08□□□□□ -0.32
C9orf85-204ENST00000473252 SIPA1Q96FS4 1042 aa13.08□□□□□ -0.32
C9orf85-204ENST00000473252 RPRD1AQ96P16 312 aaPredicted RBP13.08□□□□□ -0.32
C9orf85-204ENST00000473252 HAPLN3Q96S86 360 aa13.08□□□□□ -0.32
C9orf85-204ENST00000473252 AGPAT1Q99943 283 aa13.08□□□□□ -0.32
C9orf85-204ENST00000473252 TKTL2Q9H0I9 626 aa13.08□□□□□ -0.32
C9orf85-204ENST00000473252 RETREG1Q9H6L5 497 aa13.08□□□□□ -0.32
C9orf85-204ENST00000473252 PIGVQ9NUD9 493 aa13.08□□□□□ -0.32
C9orf85-204ENST00000473252 EVLQ9UI08 416 aaPredicted RBP13.08□□□□□ -0.32
C9orf85-204ENST00000473252 MBD1Q9UIS9 605 aaPredicted RBP13.08□□□□□ -0.32
C9orf85-204ENST00000473252 CDV3Q9UKY7 258 aaKnown RBP13.08□□□□□ -0.32
C9orf85-204ENST00000473252 INTS6Q9UL03 887 aaKnown RBP13.08□□□□□ -0.32
C9orf85-204ENST00000473252 SCML1Q9UN30 329 aa13.08□□□□□ -0.32
C9orf85-204ENST00000473252 INVSQ9Y283 1065 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms