RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 TEX13AQ9BXU3 409 aaPredicted RBP6.25□□□□□ -1.41
RTF1-203ENST00000473214 SLC5A7Q9GZV3 580 aa6.25□□□□□ -1.41
RTF1-203ENST00000473214 TAOK3Q9H2K8 898 aa6.25□□□□□ -1.41
RTF1-203ENST00000473214 VEZTQ9HBM0 779 aa6.25□□□□□ -1.41
RTF1-203ENST00000473214 DDX4Q9NQI0 724 aaKnown RBP6.25□□□□□ -1.41
RTF1-203ENST00000473214 GFOD1Q9NXC2 390 aa6.25□□□□□ -1.41
RTF1-203ENST00000473214 CLEC1BQ9P126 229 aa6.25□□□□□ -1.41
RTF1-203ENST00000473214 ZNF212Q9UDV6 495 aa6.25□□□□□ -1.41
RTF1-203ENST00000473214 LIPT1Q9Y234 373 aa6.25□□□□□ -1.41
RTF1-203ENST00000473214 CHKBQ9Y259 395 aa6.25□□□□□ -1.41
RTF1-203ENST00000473214 CHTOPQ9Y3Y2 248 aaKnown RBP6.25□□□□□ -1.41
RTF1-203ENST00000473214 TRPV2Q9Y5S1 764 aa6.25□□□□□ -1.41
RTF1-203ENST00000473214 SLC4A4Q9Y6R1 1079 aa6.25□□□□□ -1.41
RTF1-203ENST00000473214 NINLQ9Y2I6 1382 aa6.25□□□□□ -1.41
RTF1-203ENST00000473214 CASZ1Q86V15 1759 aa6.25□□□□□ -1.41
RTF1-203ENST00000473214 IQGAP3Q86VI3 1631 aa6.25□□□□□ -1.41
RTF1-203ENST00000473214 TTC41PQ6P2S7 1318 aa6.25□□□□□ -1.41
RTF1-203ENST00000473214 KIF16BQ96L93 1317 aa6.25□□□□□ -1.41
RTF1-203ENST00000473214 TMEM265A0A087WTH1 108 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 EME2A4GXA9 379 aaPredicted RBP6.24□□□□□ -1.41
RTF1-203ENST00000473214 TRIM43BA6NCK2 446 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 C2orf71A6NGG8 1288 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 H0Y8X5 98 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 STX16-NPEPL1H3BU86 382 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 DNM1LO00429 736 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 STX16O14662 325 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 TSPAN4O14817 238 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 DNPH1O43598 174 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 NPHS1O60500 1241 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 TLR2O60603 784 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 PDE8BO95263 885 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 YEATS4O95619 227 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 NPPAP01160 153 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 AMY2AP04746 511 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 CD3EP07766 207 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 PRR35P0CG20 571 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 PLS3P13797 630 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 VAV1P15498 845 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 AMY2BP19961 511 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 EIF4A1P60842 406 aaKnown RBP6.24□□□□□ -1.41
RTF1-203ENST00000473214 YPEL5P62699 121 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 FSTL1Q12841 308 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 TDGQ13569 410 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 FRG1Q14331 258 aaKnown RBP6.24□□□□□ -1.41
RTF1-203ENST00000473214 ARHGEF6Q15052 776 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 EPHA7Q15375 998 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 MED22Q15528 200 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 GPR19Q15760 415 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 STK11Q15831 433 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 NFIL3Q16649 462 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 ZBTB41Q5SVQ8 909 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 NAA35Q5VZE5 725 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 CES4AQ5XG92 561 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 ETFRF1Q6IPR1 90 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 CENPPQ6IPU0 288 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 SLC23A3Q6PIS1 610 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 ATG14Q6ZNE5 492 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 ARHGAP36Q6ZRI8 547 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 DNAAF5Q86Y56 855 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 SIX6OS1Q8N1H7 587 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 FBXW8Q8N3Y1 598 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 FLAD1Q8NFF5 587 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 NEK11Q8NG66 645 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 RAB7BQ96AH8 199 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 SLC22A18Q96BI1 424 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 TRIM43Q96BQ3 446 aaPredicted RBP6.24□□□□□ -1.41
RTF1-203ENST00000473214 CHAMP1Q96JM3 812 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 MRGPRX1Q96LB2 322 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 CNOT6LQ96LI5 555 aaKnown RBP6.24□□□□□ -1.41
RTF1-203ENST00000473214 FUZQ9BT04 418 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 CCDC106Q9BWC9 280 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 FAM129AQ9BZQ8 928 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 NYXQ9GZU5 481 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 ADAM7Q9H2U9 754 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 POFUT1Q9H488 388 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 ST6GALNAC4Q9H4F1 302 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 MRPL44Q9H9J2 332 aaKnown RBP6.24□□□□□ -1.41
RTF1-203ENST00000473214 HPS4Q9NQG7 708 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 SERINC1Q9NRX5 453 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 ABCB8Q9NUT2 735 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 HSPBP1Q9NZL4 362 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 MARCH4Q9P2E8 410 aaPredicted RBP6.24□□□□□ -1.41
RTF1-203ENST00000473214 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.24□□□□□ -1.41
RTF1-203ENST00000473214 PCDHA5Q9Y5H7 936 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 PCDHA1Q9Y5I3 950 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 NEXMIFQ5QGS0 1516 aa6.24□□□□□ -1.41
RTF1-203ENST00000473214 CENPJQ9HC77 1338 aaPredicted RBP6.24□□□□□ -1.41
RTF1-203ENST00000473214 NPIPB15A6NHN6 443 aaPredicted RBP6.23□□□□□ -1.41
RTF1-203ENST00000473214 TBKBP1A7MCY6 615 aa6.23□□□□□ -1.41
RTF1-203ENST00000473214 EBAG9O00559 213 aa6.23□□□□□ -1.41
RTF1-203ENST00000473214 TNPO2O14787 897 aaKnown RBP6.23□□□□□ -1.41
RTF1-203ENST00000473214 CETN3O15182 167 aa6.23□□□□□ -1.41
RTF1-203ENST00000473214 PSMD10O75832 226 aa6.23□□□□□ -1.41
RTF1-203ENST00000473214 APOL3O95236 402 aa6.23□□□□□ -1.41
RTF1-203ENST00000473214 PLGP00747 810 aaPredicted RBP6.23□□□□□ -1.41
RTF1-203ENST00000473214 GJB1P08034 283 aa6.23□□□□□ -1.41
RTF1-203ENST00000473214 ACTN1P12814 892 aa6.23□□□□□ -1.41
RTF1-203ENST00000473214 KRT5P13647 590 aa6.23□□□□□ -1.41
RTF1-203ENST00000473214 ALADP13716 330 aa6.23□□□□□ -1.41
RTF1-203ENST00000473214 GSPT1P15170 499 aaKnown RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms