RNA–Protein interactions for RNA: ENST00000472807.1

CHEK2-223, Transcript of checkpoint kinase 2, human

TSL 2

Gene CHEK2, Length 514 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHEK2-223	ENST00000472807	TRUB2	O95900	331 aa	Known RBP	9.24	□□□□□ -0.93
CHEK2-223	ENST00000472807	DNTT	P04053	509 aa		9.24	□□□□□ -0.93
CHEK2-223	ENST00000472807	SLC2A3	P11169	496 aa		9.24	□□□□□ -0.93
CHEK2-223	ENST00000472807	PON1	P27169	355 aa		9.24	□□□□□ -0.93
CHEK2-223	ENST00000472807	MAOB	P27338	520 aa		9.24	□□□□□ -0.93
CHEK2-223	ENST00000472807	CSK	P41240	450 aa		9.24	□□□□□ -0.93
CHEK2-223	ENST00000472807	RPS24	P62847	133 aa	Known RBP	9.24	□□□□□ -0.93
CHEK2-223	ENST00000472807	CDK17	Q00537	523 aa		9.24	□□□□□ -0.93
CHEK2-223	ENST00000472807	APBA1	Q02410	837 aa		9.24	□□□□□ -0.93
CHEK2-223	ENST00000472807	GRIK2	Q13002	908 aa		9.24	□□□□□ -0.93
CHEK2-223	ENST00000472807	SEMA3B	Q13214	749 aa		9.24	□□□□□ -0.93
CHEK2-223	ENST00000472807	SLC14A1	Q13336	389 aa		9.24	□□□□□ -0.93
CHEK2-223	ENST00000472807	MAN2A1	Q16706	1144 aa		9.24	□□□□□ -0.93
CHEK2-223	ENST00000472807	DCAF6	Q58WW2	860 aa		9.24	□□□□□ -0.93
CHEK2-223	ENST00000472807	ZC3H12A	Q5D1E8	599 aa	Known RBP	9.24	□□□□□ -0.93
CHEK2-223	ENST00000472807	LCE2D	Q5TA82	110 aa	Predicted RBP	9.24	□□□□□ -0.93
CHEK2-223	ENST00000472807	DCAF12L1	Q5VU92	463 aa		9.24	□□□□□ -0.93
CHEK2-223	ENST00000472807	SYPL2	Q5VXT5	272 aa		9.24	□□□□□ -0.93
CHEK2-223	ENST00000472807	RNF219	Q5W0B1	726 aa	Predicted RBP	9.24	□□□□□ -0.93
CHEK2-223	ENST00000472807	PIP4P1	Q86T03	277 aa		9.24	□□□□□ -0.93
CHEK2-223	ENST00000472807	CHSY1	Q86X52	802 aa		9.24	□□□□□ -0.93
CHEK2-223	ENST00000472807	PASD1	Q8IV76	773 aa		9.24	□□□□□ -0.93
CHEK2-223	ENST00000472807	LGI2	Q8N0V4	545 aa		9.24	□□□□□ -0.93
CHEK2-223	ENST00000472807	ATP6V0D2	Q8N8Y2	350 aa		9.24	□□□□□ -0.93
CHEK2-223	ENST00000472807	DNASE2B	Q8WZ79	361 aa		9.24	□□□□□ -0.93
CHEK2-223	ENST00000472807	PPP1R13B	Q96KQ4	1090 aa		9.24	□□□□□ -0.93
CHEK2-223	ENST00000472807	BTN2A3P	Q96KV6	586 aa		9.24	□□□□□ -0.93
CHEK2-223	ENST00000472807	SYNC	Q9H7C4	482 aa		9.24	□□□□□ -0.93
CHEK2-223	ENST00000472807	PRSS16	Q9NQE7	514 aa		9.24	□□□□□ -0.93
CHEK2-223	ENST00000472807	DNAAF2	Q9NVR5	837 aa	Known RBP	9.24	□□□□□ -0.93
CHEK2-223	ENST00000472807	SUN2	Q9UH99	717 aa		9.24	□□□□□ -0.93
CHEK2-223	ENST00000472807	SLC12A6	Q9UHW9	1150 aa		9.24	□□□□□ -0.93
CHEK2-223	ENST00000472807	DMXL2	Q8TDJ6	3036 aa		9.24	□□□□□ -0.93
CHEK2-223	ENST00000472807	LAMA5	O15230	3695 aa		9.24	□□□□□ -0.93
CHEK2-223	ENST00000472807	METTL12	A8MUP2	240 aa		9.23	□□□□□ -0.93
CHEK2-223	ENST00000472807	PES1	O00541	588 aa	Known RBP	9.23	□□□□□ -0.93
CHEK2-223	ENST00000472807	BCAT2	O15382	392 aa	Predicted RBP	9.23	□□□□□ -0.93
CHEK2-223	ENST00000472807	RNASEH1	O60930	286 aa	Known RBP	9.23	□□□□□ -0.93
CHEK2-223	ENST00000472807	LUC7L3	O95232	432 aa	Known RBP	9.23	□□□□□ -0.93
CHEK2-223	ENST00000472807	CER1	O95813	267 aa		9.23	□□□□□ -0.93
CHEK2-223	ENST00000472807	IGLV3-25	P01717	112 aa		9.23	□□□□□ -0.93
CHEK2-223	ENST00000472807	GLI1	P08151	1106 aa		9.23	□□□□□ -0.93
CHEK2-223	ENST00000472807	PRKCSH	P14314	528 aa	Predicted RBP	9.23	□□□□□ -0.93
CHEK2-223	ENST00000472807	ABCB4	P21439	1286 aa		9.23	□□□□□ -0.93
CHEK2-223	ENST00000472807	TACR2	P21452	398 aa		9.23	□□□□□ -0.93
CHEK2-223	ENST00000472807	CCR1	P32246	355 aa		9.23	□□□□□ -0.93
CHEK2-223	ENST00000472807	KRT9	P35527	623 aa		9.23	□□□□□ -0.93
CHEK2-223	ENST00000472807	AFF3	P51826	1226 aa	Known RBP	9.23	□□□□□ -0.93
CHEK2-223	ENST00000472807	SIM1	P81133	766 aa	Predicted RBP	9.23	□□□□□ -0.93
CHEK2-223	ENST00000472807	PTK2	Q05397	1052 aa		9.23	□□□□□ -0.93
CHEK2-223	ENST00000472807	HNRNPD	Q14103	355 aa	Known RBP	9.23	□□□□□ -0.93
CHEK2-223	ENST00000472807	HNRNPA1L2	Q32P51	320 aa	Known RBP	9.23	□□□□□ -0.93
CHEK2-223	ENST00000472807	DPCR1	Q3MIW9	517 aa		9.23	□□□□□ -0.93
CHEK2-223	ENST00000472807	PITRM1	Q5JRX3	1037 aa		9.23	□□□□□ -0.93
CHEK2-223	ENST00000472807	EFHC1	Q5JVL4	640 aa		9.23	□□□□□ -0.93
CHEK2-223	ENST00000472807	RABGAP1L	Q5R372	815 aa		9.23	□□□□□ -0.93
CHEK2-223	ENST00000472807	TTC39B	Q5VTQ0	682 aa	Predicted RBP	9.23	□□□□□ -0.93
CHEK2-223	ENST00000472807	RAP1GAP2	Q684P5	730 aa		9.23	□□□□□ -0.93
CHEK2-223	ENST00000472807	IL27RA	Q6UWB1	636 aa		9.23	□□□□□ -0.93
CHEK2-223	ENST00000472807	IRF2BP1	Q8IU81	584 aa		9.23	□□□□□ -0.93
CHEK2-223	ENST00000472807	CFAP52	Q8N1V2	620 aa		9.23	□□□□□ -0.93
CHEK2-223	ENST00000472807	KDM1B	Q8NB78	822 aa		9.23	□□□□□ -0.93
CHEK2-223	ENST00000472807	C1orf131	Q8NDD1	294 aa	Known RBP	9.23	□□□□□ -0.93
CHEK2-223	ENST00000472807	OR2I1P	Q8NGU4	316 aa		9.23	□□□□□ -0.93
CHEK2-223	ENST00000472807	GANC	Q8TET4	914 aa		9.23	□□□□□ -0.93
CHEK2-223	ENST00000472807	RNF34	Q969K3	372 aa		9.23	□□□□□ -0.93
CHEK2-223	ENST00000472807	TTC17	Q96AE7	1141 aa		9.23	□□□□□ -0.93
CHEK2-223	ENST00000472807	MYEOV	Q96EZ4	313 aa		9.23	□□□□□ -0.93
CHEK2-223	ENST00000472807	LMLN	Q96KR4	655 aa		9.23	□□□□□ -0.93
CHEK2-223	ENST00000472807	SLC2A13	Q96QE2	648 aa		9.23	□□□□□ -0.93
CHEK2-223	ENST00000472807	CPXM1	Q96SM3	734 aa		9.23	□□□□□ -0.93
CHEK2-223	ENST00000472807	BTBD1	Q9H0C5	482 aa		9.23	□□□□□ -0.93
CHEK2-223	ENST00000472807	NUP62CL	Q9H1M0	184 aa		9.23	□□□□□ -0.93
CHEK2-223	ENST00000472807	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	9.23	□□□□□ -0.93
CHEK2-223	ENST00000472807	ASNSD1	Q9NWL6	643 aa		9.23	□□□□□ -0.93
CHEK2-223	ENST00000472807	DDIT4	Q9NX09	232 aa		9.23	□□□□□ -0.93
CHEK2-223	ENST00000472807	KIAA1522	Q9P206	1035 aa	Predicted RBP	9.23	□□□□□ -0.93
CHEK2-223	ENST00000472807	XPO7	Q9UIA9	1087 aa	Known RBP	9.23	□□□□□ -0.93
CHEK2-223	ENST00000472807	DNAJC12	Q9UKB3	198 aa		9.23	□□□□□ -0.93
CHEK2-223	ENST00000472807	SCML1	Q9UN30	329 aa		9.23	□□□□□ -0.93
CHEK2-223	ENST00000472807	PCDHGC3	Q9UN70	934 aa		9.23	□□□□□ -0.93
CHEK2-223	ENST00000472807	CABIN1	Q9Y6J0	2220 aa		9.23	□□□□□ -0.93
CHEK2-223	ENST00000472807	ANKRD11	Q6UB99	2663 aa	Predicted RBP	9.22	□□□□□ -0.93
CHEK2-223	ENST00000472807	SYNJ2BP-COX16	A0A087WUM0	186 aa		9.22	□□□□□ -0.93
CHEK2-223	ENST00000472807	EDDM13	A0A1B0GTR0	161 aa		9.22	□□□□□ -0.93
CHEK2-223	ENST00000472807		A0A1B0GVM2	712 aa		9.22	□□□□□ -0.93
CHEK2-223	ENST00000472807	TCAF2	A6NFQ2	919 aa		9.22	□□□□□ -0.93
CHEK2-223	ENST00000472807	KCNU1	A8MYU2	1149 aa		9.22	□□□□□ -0.93
CHEK2-223	ENST00000472807	SEMA4F	O95754	770 aa		9.22	□□□□□ -0.93
CHEK2-223	ENST00000472807	SRPRA	P08240	638 aa	Known RBP	9.22	□□□□□ -0.93
CHEK2-223	ENST00000472807	ERCC5	P28715	1186 aa	Predicted RBP	9.22	□□□□□ -0.93
CHEK2-223	ENST00000472807	ACSL1	P33121	698 aa		9.22	□□□□□ -0.93
CHEK2-223	ENST00000472807	RDX	P35241	583 aa	Known RBP	9.22	□□□□□ -0.93
CHEK2-223	ENST00000472807	BPIFB4	P59827	614 aa		9.22	□□□□□ -0.93
CHEK2-223	ENST00000472807	RPS14	P62263	151 aa	Known RBP	9.22	□□□□□ -0.93
CHEK2-223	ENST00000472807	ECT2L	Q008S8	904 aa		9.22	□□□□□ -0.93
CHEK2-223	ENST00000472807	SFSWAP	Q12872	951 aa	Known RBP	9.22	□□□□□ -0.93
CHEK2-223	ENST00000472807	MTA1	Q13330	715 aa		9.22	□□□□□ -0.93
CHEK2-223	ENST00000472807	ARID5B	Q14865	1188 aa		9.22	□□□□□ -0.93
CHEK2-223	ENST00000472807	TAF5	Q15542	800 aa		9.22	□□□□□ -0.93

Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms