RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 GNSP15586 552 aa13.98□□□□□ -0.17
HMGN1-211ENST00000471260 ENGP17813 658 aa13.98□□□□□ -0.17
HMGN1-211ENST00000471260 PRKCHP24723 683 aa13.98□□□□□ -0.17
HMGN1-211ENST00000471260 EEF1GP26641 437 aaKnown RBP13.98□□□□□ -0.17
HMGN1-211ENST00000471260 TPMTP51580 245 aa13.98□□□□□ -0.17
HMGN1-211ENST00000471260 SGSHP51688 502 aa13.98□□□□□ -0.17
HMGN1-211ENST00000471260 GSDMDP57764 484 aa13.98□□□□□ -0.17
HMGN1-211ENST00000471260 CDK17Q00537 523 aa13.98□□□□□ -0.17
HMGN1-211ENST00000471260 GFPT1Q06210 699 aaPredicted RBP13.98□□□□□ -0.17
HMGN1-211ENST00000471260 SYCP1Q15431 976 aa13.98□□□□□ -0.17
HMGN1-211ENST00000471260 PTPRNQ16849 979 aa13.98□□□□□ -0.17
HMGN1-211ENST00000471260 DCAF6Q58WW2 860 aa13.98□□□□□ -0.17
HMGN1-211ENST00000471260 MIIPQ5JXC2 388 aa13.98□□□□□ -0.17
HMGN1-211ENST00000471260 C11orf57Q6ZUT1 292 aaPredicted RBP13.98□□□□□ -0.17
HMGN1-211ENST00000471260 ZDHHC17Q8IUH5 632 aa13.98□□□□□ -0.17
HMGN1-211ENST00000471260 FAM71AQ8IYT1 594 aa13.98□□□□□ -0.17
HMGN1-211ENST00000471260 DNASE2BQ8WZ79 361 aa13.98□□□□□ -0.17
HMGN1-211ENST00000471260 TOE1Q96GM8 510 aaKnown RBP13.98□□□□□ -0.17
HMGN1-211ENST00000471260 LMLNQ96KR4 655 aa13.98□□□□□ -0.17
HMGN1-211ENST00000471260 SLC2A13Q96QE2 648 aa13.98□□□□□ -0.17
HMGN1-211ENST00000471260 CPXM1Q96SM3 734 aa13.98□□□□□ -0.17
HMGN1-211ENST00000471260 KCND1Q9NSA2 647 aa13.98□□□□□ -0.17
HMGN1-211ENST00000471260 IMPACTQ9P2X3 320 aa13.98□□□□□ -0.17
HMGN1-211ENST00000471260 TJP2Q9UDY2 1190 aa13.98□□□□□ -0.17
HMGN1-211ENST00000471260 UPK3BL1B0FP48 263 aa13.97□□□□□ -0.17
HMGN1-211ENST00000471260 KCNJ18B7U540 433 aa13.97□□□□□ -0.17
HMGN1-211ENST00000471260 UPK3BL2E5RIL1 263 aa13.97□□□□□ -0.17
HMGN1-211ENST00000471260 MOCS3O95396 460 aa13.97□□□□□ -0.17
HMGN1-211ENST00000471260 CFIP05156 583 aa13.97□□□□□ -0.17
HMGN1-211ENST00000471260 CCR1P32246 355 aa13.97□□□□□ -0.17
HMGN1-211ENST00000471260 CD70P32970 193 aa13.97□□□□□ -0.17
HMGN1-211ENST00000471260 ATXN3P54252 364 aaPredicted RBP13.97□□□□□ -0.17
HMGN1-211ENST00000471260 ST8SIA6P61647 398 aa13.97□□□□□ -0.17
HMGN1-211ENST00000471260 APBA1Q02410 837 aa13.97□□□□□ -0.17
HMGN1-211ENST00000471260 SLC12A1Q13621 1099 aa13.97□□□□□ -0.17
HMGN1-211ENST00000471260 CDH18Q13634 790 aa13.97□□□□□ -0.17
HMGN1-211ENST00000471260 ARID5BQ14865 1188 aa13.97□□□□□ -0.17
HMGN1-211ENST00000471260 ZC3H12AQ5D1E8 599 aaKnown RBP13.97□□□□□ -0.17
HMGN1-211ENST00000471260 N4BP2L1Q5TBK1 243 aaPredicted RBP13.97□□□□□ -0.17
HMGN1-211ENST00000471260 TTC39BQ5VTQ0 682 aaPredicted RBP13.97□□□□□ -0.17
HMGN1-211ENST00000471260 RGL4Q8IZJ4 473 aa13.97□□□□□ -0.17
HMGN1-211ENST00000471260 DEFB119Q8N690 84 aa13.97□□□□□ -0.17
HMGN1-211ENST00000471260 C1orf131Q8NDD1 294 aaKnown RBP13.97□□□□□ -0.17
HMGN1-211ENST00000471260 ADAM32Q8TC27 787 aa13.97□□□□□ -0.17
HMGN1-211ENST00000471260 WFDC5Q8TCV5 224 aa13.97□□□□□ -0.17
HMGN1-211ENST00000471260 CYB5D2Q8WUJ1 264 aa13.97□□□□□ -0.17
HMGN1-211ENST00000471260 ERLEC1Q96DZ1 483 aa13.97□□□□□ -0.17
HMGN1-211ENST00000471260 PRICKLE1Q96MT3 831 aaPredicted RBP13.97□□□□□ -0.17
HMGN1-211ENST00000471260 NUCKS1Q9H1E3 243 aaKnown RBP13.97□□□□□ -0.17
HMGN1-211ENST00000471260 CD93Q9NPY3 652 aa13.97□□□□□ -0.17
HMGN1-211ENST00000471260 RRN3Q9NYV6 651 aa13.97□□□□□ -0.17
HMGN1-211ENST00000471260 KIAA1522Q9P206 1035 aaPredicted RBP13.97□□□□□ -0.17
HMGN1-211ENST00000471260 STIM2Q9P246 746 aa13.97□□□□□ -0.17
HMGN1-211ENST00000471260 ATXN2Q99700 1313 aaKnown RBP13.96□□□□□ -0.17
HMGN1-211ENST00000471260 METTL12A8MUP2 240 aa13.96□□□□□ -0.17
HMGN1-211ENST00000471260 KCNU1A8MYU2 1149 aa13.96□□□□□ -0.17
HMGN1-211ENST00000471260 F5H5T6 163 aa13.96□□□□□ -0.17
HMGN1-211ENST00000471260 ARHGAP33O14559 1287 aa13.96□□□□□ -0.17
HMGN1-211ENST00000471260 LUC7L3O95232 432 aaKnown RBP13.96□□□□□ -0.17
HMGN1-211ENST00000471260 MOCS2O96007 188 aaPredicted RBP13.96□□□□□ -0.17
HMGN1-211ENST00000471260 SRPRAP08240 638 aaKnown RBP13.96□□□□□ -0.17
HMGN1-211ENST00000471260 HLA-EP13747 358 aa13.96□□□□□ -0.17
HMGN1-211ENST00000471260 ABCB4P21439 1286 aa13.96□□□□□ -0.17
HMGN1-211ENST00000471260 TACR2P21452 398 aa13.96□□□□□ -0.17
HMGN1-211ENST00000471260 PMLP29590 882 aa13.96□□□□□ -0.17
HMGN1-211ENST00000471260 CDH5P33151 784 aaPredicted RBP13.96□□□□□ -0.17
HMGN1-211ENST00000471260 NOVA1P51513 510 aaKnown RBP13.96□□□□□ -0.17
HMGN1-211ENST00000471260 OXCT1P55809 520 aa13.96□□□□□ -0.17
HMGN1-211ENST00000471260 RPS24P62847 133 aaKnown RBP13.96□□□□□ -0.17
HMGN1-211ENST00000471260 KCNMA1Q12791 1236 aa13.96□□□□□ -0.17
HMGN1-211ENST00000471260 KCNJ12Q14500 433 aa13.96□□□□□ -0.17
HMGN1-211ENST00000471260 TCP11X2Q5H9J9 407 aa13.96□□□□□ -0.17
HMGN1-211ENST00000471260 PSAPL1Q6NUJ1 521 aa13.96□□□□□ -0.17
HMGN1-211ENST00000471260 DPY19L2P1Q6NXN4 242 aa13.96□□□□□ -0.17
HMGN1-211ENST00000471260 OLFML1Q6UWY5 402 aa13.96□□□□□ -0.17
HMGN1-211ENST00000471260 SLC26A9Q7LBE3 791 aa13.96□□□□□ -0.17
HMGN1-211ENST00000471260 SLC47A2Q86VL8 602 aa13.96□□□□□ -0.17
HMGN1-211ENST00000471260 DEFB106AQ8N104 65 aa13.96□□□□□ -0.17
HMGN1-211ENST00000471260 CARNMT1Q8N4J0 409 aa13.96□□□□□ -0.17
HMGN1-211ENST00000471260 HDDC3Q8N4P3 179 aa13.96□□□□□ -0.17
HMGN1-211ENST00000471260 ZNF397Q8NF99 534 aaPredicted RBP13.96□□□□□ -0.17
HMGN1-211ENST00000471260 ENOX1Q8TC92 643 aaKnown RBP13.96□□□□□ -0.17
HMGN1-211ENST00000471260 ZDHHC5Q9C0B5 715 aa13.96□□□□□ -0.17
HMGN1-211ENST00000471260 SLC32A1Q9H598 525 aa13.96□□□□□ -0.17
HMGN1-211ENST00000471260 SYNCQ9H7C4 482 aa13.96□□□□□ -0.17
HMGN1-211ENST00000471260 PRSS16Q9NQE7 514 aa13.96□□□□□ -0.17
HMGN1-211ENST00000471260 DDIT4Q9NX09 232 aa13.96□□□□□ -0.17
HMGN1-211ENST00000471260 SCML1Q9UN30 329 aa13.96□□□□□ -0.17
HMGN1-211ENST00000471260 A0A1B0GTW7 788 aa13.95□□□□□ -0.18
HMGN1-211ENST00000471260 SMTNL1A8MU46 457 aa13.95□□□□□ -0.18
HMGN1-211ENST00000471260 MEI4A8MW99 385 aa13.95□□□□□ -0.18
HMGN1-211ENST00000471260 H0Y626 953 aa13.95□□□□□ -0.18
HMGN1-211ENST00000471260 KIF2AO00139 706 aaPredicted RBP13.95□□□□□ -0.18
HMGN1-211ENST00000471260 DNTTP04053 509 aa13.95□□□□□ -0.18
HMGN1-211ENST00000471260 KCNA4P22459 653 aa13.95□□□□□ -0.18
HMGN1-211ENST00000471260 NOS2P35228 1153 aa13.95□□□□□ -0.18
HMGN1-211ENST00000471260 SCNN1AP37088 669 aa13.95□□□□□ -0.18
HMGN1-211ENST00000471260 CSKP41240 450 aa13.95□□□□□ -0.18
HMGN1-211ENST00000471260 SHC2P98077 582 aa13.95□□□□□ -0.18
HMGN1-211ENST00000471260 SLC6A3Q01959 620 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms