RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 WDR93Q6P2C0 686 aa1.64□□□□□ -2.15
UBXN4-207ENST00000471246 KSR2Q6VAB6 950 aa1.64□□□□□ -2.15
UBXN4-207ENST00000471246 SLC39A5Q6ZMH5 540 aa1.64□□□□□ -2.15
UBXN4-207ENST00000471246 DPP9Q86TI2 863 aa1.64□□□□□ -2.15
UBXN4-207ENST00000471246 TTC30AQ86WT1 665 aa1.64□□□□□ -2.15
UBXN4-207ENST00000471246 SKAP1Q86WV1 359 aa1.64□□□□□ -2.15
UBXN4-207ENST00000471246 ADGRF3Q8IZF5 1079 aa1.64□□□□□ -2.15
UBXN4-207ENST00000471246 PAQR4Q8N4S7 273 aaPredicted RBP1.64□□□□□ -2.15
UBXN4-207ENST00000471246 FAM47BQ8NA70 645 aa1.64□□□□□ -2.15
UBXN4-207ENST00000471246 ADPRHL1Q8NDY3 354 aa1.64□□□□□ -2.15
UBXN4-207ENST00000471246 BRI3BPQ8WY22 251 aa1.64□□□□□ -2.15
UBXN4-207ENST00000471246 LPAR1Q92633 364 aa1.64□□□□□ -2.15
UBXN4-207ENST00000471246 KIAA1191Q96A73 305 aa1.64□□□□□ -2.15
UBXN4-207ENST00000471246 MCRS1Q96EZ8 462 aa1.64□□□□□ -2.15
UBXN4-207ENST00000471246 CLMNQ96JQ2 1002 aa1.64□□□□□ -2.15
UBXN4-207ENST00000471246 ZNF347Q96SE7 839 aa1.64□□□□□ -2.15
UBXN4-207ENST00000471246 WDR83Q9BRX9 315 aaKnown RBP1.64□□□□□ -2.15
UBXN4-207ENST00000471246 STK33Q9BYT3 514 aa1.64□□□□□ -2.15
UBXN4-207ENST00000471246 HIPK2Q9H2X6 1198 aa1.64□□□□□ -2.15
UBXN4-207ENST00000471246 EPS8L2Q9H6S3 715 aa1.64□□□□□ -2.15
UBXN4-207ENST00000471246 MLXIPQ9HAP2 919 aa1.64□□□□□ -2.15
UBXN4-207ENST00000471246 HELLSQ9NRZ9 838 aa1.64□□□□□ -2.15
UBXN4-207ENST00000471246 MTPAPQ9NVV4 582 aaKnown RBP eCLIP1.64□□□□□ -2.153e-7■■■□□ 15.3
UBXN4-207ENST00000471246 SLC52A1Q9NWF4 448 aa1.64□□□□□ -2.15
UBXN4-207ENST00000471246 MDFICQ9P1T7 246 aa1.64□□□□□ -2.15
UBXN4-207ENST00000471246 ANAPC4Q9UJX5 808 aa1.64□□□□□ -2.15
UBXN4-207ENST00000471246 PHTF1Q9UMS5 762 aa1.64□□□□□ -2.15
UBXN4-207ENST00000471246 LAMP3Q9UQV4 416 aa1.64□□□□□ -2.15
UBXN4-207ENST00000471246 CEP83Q9Y592 693 aa1.64□□□□□ -2.15
UBXN4-207ENST00000471246 LOC105369274A0A096LPK9 316 aa1.63□□□□□ -2.15
UBXN4-207ENST00000471246 LOC102723532A0A0G2JNH3 316 aa1.63□□□□□ -2.15
UBXN4-207ENST00000471246 CXorf65A6NEN9 183 aa1.63□□□□□ -2.15
UBXN4-207ENST00000471246 C3orf70A6NLC5 250 aaPredicted RBP1.63□□□□□ -2.15
UBXN4-207ENST00000471246 GTPBP1O00178 669 aaKnown RBP1.63□□□□□ -2.15
UBXN4-207ENST00000471246 HNRNPDLO14979 420 aaKnown RBP1.63□□□□□ -2.15
UBXN4-207ENST00000471246 PIP5K1BO14986 540 aa1.63□□□□□ -2.15
UBXN4-207ENST00000471246 MDM4O15151 490 aa1.63□□□□□ -2.15
UBXN4-207ENST00000471246 SPTLC2O15270 562 aa1.63□□□□□ -2.15
UBXN4-207ENST00000471246 PRPF4O43172 522 aaKnown RBP eCLIP1.63□□□□□ -2.15
UBXN4-207ENST00000471246 ASNA1O43681 348 aa1.63□□□□□ -2.15
UBXN4-207ENST00000471246 NFATC1O95644 943 aa1.63□□□□□ -2.15
UBXN4-207ENST00000471246 CER1O95813 267 aa1.63□□□□□ -2.15
UBXN4-207ENST00000471246 ANXA6P08133 673 aa1.63□□□□□ -2.15
UBXN4-207ENST00000471246 ALDOCP09972 364 aaKnown RBP1.63□□□□□ -2.15
UBXN4-207ENST00000471246 NBPF7P0C2Y1 421 aaPredicted RBP1.63□□□□□ -2.15
UBXN4-207ENST00000471246 T-ENOLP0DO92 83 aa1.63□□□□□ -2.15
UBXN4-207ENST00000471246 PEPDP12955 493 aa1.63□□□□□ -2.15
UBXN4-207ENST00000471246 NPPBP16860 134 aa1.63□□□□□ -2.15
UBXN4-207ENST00000471246 IGFBP2P18065 325 aa1.63□□□□□ -2.15
UBXN4-207ENST00000471246 ABCB4P21439 1286 aa1.63□□□□□ -2.15
UBXN4-207ENST00000471246 TBXAS1P24557 533 aaPredicted RBP1.63□□□□□ -2.15
UBXN4-207ENST00000471246 CDC25AP30304 524 aa1.63□□□□□ -2.15
UBXN4-207ENST00000471246 CDKN2AP42771 156 aaKnown RBP1.63□□□□□ -2.15
UBXN4-207ENST00000471246 POLD2P49005 469 aa1.63□□□□□ -2.15
UBXN4-207ENST00000471246 NEK3P51956 506 aa1.63□□□□□ -2.15
UBXN4-207ENST00000471246 PGGT1BP53609 377 aa1.63□□□□□ -2.15
UBXN4-207ENST00000471246 AK2P54819 239 aa1.63□□□□□ -2.15
UBXN4-207ENST00000471246 ALDH18A1P54886 795 aaKnown RBP1.63□□□□□ -2.15
UBXN4-207ENST00000471246 SHC2P98077 582 aa1.63□□□□□ -2.15
UBXN4-207ENST00000471246 TLE3Q04726 772 aa1.63□□□□□ -2.15
UBXN4-207ENST00000471246 RNASELQ05823 741 aaKnown RBP1.63□□□□□ -2.15
UBXN4-207ENST00000471246 HYAL1Q12794 435 aa1.63□□□□□ -2.15
UBXN4-207ENST00000471246 HLTFQ14527 1009 aaKnown RBP eCLIP1.63□□□□□ -2.153e-8■■□□□ 12.6
UBXN4-207ENST00000471246 ARL13AQ5H913 290 aaPredicted RBP1.63□□□□□ -2.15
UBXN4-207ENST00000471246 CYB5R4Q7L1T6 521 aa1.63□□□□□ -2.15
UBXN4-207ENST00000471246 RTL10Q7L3V2 364 aa1.63□□□□□ -2.15
UBXN4-207ENST00000471246 MDGA2Q7Z553 956 aa1.63□□□□□ -2.15
UBXN4-207ENST00000471246 C11orf96Q7Z7L8 435 aa1.63□□□□□ -2.15
UBXN4-207ENST00000471246 TRABD2AQ86V40 505 aa1.63□□□□□ -2.15
UBXN4-207ENST00000471246 OR4N4Q8N0Y3 316 aa1.63□□□□□ -2.15
UBXN4-207ENST00000471246 EXD3Q8N9H8 876 aa1.63□□□□□ -2.15
UBXN4-207ENST00000471246 SRFBP1Q8NEF9 429 aaKnown RBP1.63□□□□□ -2.15
UBXN4-207ENST00000471246 B4GALNT2Q8NHY0 566 aa1.63□□□□□ -2.15
UBXN4-207ENST00000471246 KAT2AQ92830 837 aa1.63□□□□□ -2.15
UBXN4-207ENST00000471246 MUL1Q969V5 352 aa1.63□□□□□ -2.15
UBXN4-207ENST00000471246 WBP1Q96G27 269 aa1.63□□□□□ -2.15
UBXN4-207ENST00000471246 REXO5Q96IC2 774 aaKnown RBP1.63□□□□□ -2.15
UBXN4-207ENST00000471246 THOC3Q96J01 351 aaKnown RBP1.63□□□□□ -2.15
UBXN4-207ENST00000471246 ZNF479Q96JC4 524 aa1.63□□□□□ -2.15
UBXN4-207ENST00000471246 CCDC136Q96JN2 1154 aa1.63□□□□□ -2.15
UBXN4-207ENST00000471246 CCDC138Q96M89 665 aa1.63□□□□□ -2.15
UBXN4-207ENST00000471246 OSBPL5Q9H0X9 879 aaPredicted RBP1.63□□□□□ -2.15
UBXN4-207ENST00000471246 RBM38Q9H0Z9 239 aaKnown RBP1.63□□□□□ -2.15
UBXN4-207ENST00000471246 SPAG4Q9NPE6 437 aa1.63□□□□□ -2.15
UBXN4-207ENST00000471246 FZD3Q9NPG1 666 aa1.63□□□□□ -2.15
UBXN4-207ENST00000471246 TM7SF3Q9NS93 570 aa1.63□□□□□ -2.15
UBXN4-207ENST00000471246 FNIP2Q9P278 1114 aa1.63□□□□□ -2.15
UBXN4-207ENST00000471246 IGSF9Q9P2J2 1179 aa1.63□□□□□ -2.15
UBXN4-207ENST00000471246 RAB21Q9UL25 225 aa1.63□□□□□ -2.15
UBXN4-207ENST00000471246 TRPC5Q9UL62 973 aaPredicted RBP1.63□□□□□ -2.15
UBXN4-207ENST00000471246 SLC39A10Q9ULF5 831 aa1.63□□□□□ -2.15
UBXN4-207ENST00000471246 TCF20Q9UGU0 1960 aaKnown RBP1.62□□□□□ -2.15
UBXN4-207ENST00000471246 AQP12BA6NM10 295 aa1.62□□□□□ -2.15
UBXN4-207ENST00000471246 SLC38A8A6NNN8 435 aa1.62□□□□□ -2.15
UBXN4-207ENST00000471246 FOXO6A8MYZ6 492 aa1.62□□□□□ -2.15
UBXN4-207ENST00000471246 KIF28PB7ZC32 967 aa1.62□□□□□ -2.15
UBXN4-207ENST00000471246 TNFRSF13BO14836 293 aaPredicted RBP1.62□□□□□ -2.15
UBXN4-207ENST00000471246 MSI1O43347 362 aaKnown RBP1.62□□□□□ -2.15
UBXN4-207ENST00000471246 PLA2G6O60733 806 aa1.62□□□□□ -2.15
UBXN4-207ENST00000471246 NEURL1O76050 574 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms