RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 BCAT2O15382 392 aaPredicted RBP9.45□□□□□ -0.9
SF3A1-206ENST00000471037 NRDCO43847 1150 aa9.45□□□□□ -0.9
SF3A1-206ENST00000471037 SYNCRIPO60506 623 aaKnown RBP9.45□□□□□ -0.9
SF3A1-206ENST00000471037 CYBBP04839 570 aa9.45□□□□□ -0.9
SF3A1-206ENST00000471037 CCDC172P0C7W6 258 aa9.45□□□□□ -0.9
SF3A1-206ENST00000471037 CORO1AP31146 461 aaKnown RBP9.45□□□□□ -0.9
SF3A1-206ENST00000471037 HNRNPH3P31942 346 aaKnown RBP9.45□□□□□ -0.9
SF3A1-206ENST00000471037 STAT1P42224 750 aa9.45□□□□□ -0.9
SF3A1-206ENST00000471037 MATKP42679 507 aa9.45□□□□□ -0.9
SF3A1-206ENST00000471037 ADKP55263 362 aaKnown RBP9.45□□□□□ -0.9
SF3A1-206ENST00000471037 BNC1Q01954 994 aa9.45□□□□□ -0.9
SF3A1-206ENST00000471037 EFEMP1Q12805 493 aa9.45□□□□□ -0.9
SF3A1-206ENST00000471037 ZNF234Q14588 700 aa9.45□□□□□ -0.9
SF3A1-206ENST00000471037 DRAP1Q14919 205 aaPredicted RBP9.45□□□□□ -0.9
SF3A1-206ENST00000471037 RAB41Q5JT25 222 aa9.45□□□□□ -0.9
SF3A1-206ENST00000471037 PPP1R26Q5T8A7 1209 aaPredicted RBP9.45□□□□□ -0.9
SF3A1-206ENST00000471037 GJB7Q6PEY0 223 aa9.45□□□□□ -0.9
SF3A1-206ENST00000471037 RRAGAQ7L523 313 aa9.45□□□□□ -0.9
SF3A1-206ENST00000471037 SLCO6A1Q86UG4 719 aa9.45□□□□□ -0.9
SF3A1-206ENST00000471037 ARHGAP18Q8N392 663 aa9.45□□□□□ -0.9
SF3A1-206ENST00000471037 CCDC112Q8NEF3 446 aa9.45□□□□□ -0.9
SF3A1-206ENST00000471037 SHC3Q92529 594 aa9.45□□□□□ -0.9
SF3A1-206ENST00000471037 KREMEN1Q96MU8 473 aa9.45□□□□□ -0.9
SF3A1-206ENST00000471037 UBXN6Q9BZV1 441 aa9.45□□□□□ -0.9
SF3A1-206ENST00000471037 DNAI2Q9GZS0 605 aa9.45□□□□□ -0.9
SF3A1-206ENST00000471037 CCDC86Q9H6F5 360 aaKnown RBP9.45□□□□□ -0.9
SF3A1-206ENST00000471037 GAREM1Q9H706 876 aa9.45□□□□□ -0.9
SF3A1-206ENST00000471037 IL21RQ9HBE5 538 aa9.45□□□□□ -0.9
SF3A1-206ENST00000471037 TM7SF3Q9NS93 570 aa9.45□□□□□ -0.9
SF3A1-206ENST00000471037 ABHD10Q9NUJ1 306 aa9.45□□□□□ -0.9
SF3A1-206ENST00000471037 ZNHIT6Q9NWK9 470 aaKnown RBP9.45□□□□□ -0.9
SF3A1-206ENST00000471037 RASAL2Q9UJF2 1139 aa9.45□□□□□ -0.9
SF3A1-206ENST00000471037 AJAP1Q9UKB5 411 aaPredicted RBP9.45□□□□□ -0.9
SF3A1-206ENST00000471037 AGO1Q9UL18 857 aaKnown RBP9.45□□□□□ -0.9
SF3A1-206ENST00000471037 FNDC3AQ9Y2H6 1198 aaKnown RBP9.45□□□□□ -0.9
SF3A1-206ENST00000471037 DSPP15924 2871 aaKnown RBP9.45□□□□□ -0.9
SF3A1-206ENST00000471037 MYH10P35580 1976 aa9.44□□□□□ -0.9
SF3A1-206ENST00000471037 ITPR1Q14643 2758 aa9.44□□□□□ -0.9
SF3A1-206ENST00000471037 LAMA5O15230 3695 aa9.44□□□□□ -0.9
SF3A1-206ENST00000471037 LRRC53A6NM62 1247 aa9.44□□□□□ -0.9
SF3A1-206ENST00000471037 RNF225M0QZC1 329 aaPredicted RBP9.44□□□□□ -0.9
SF3A1-206ENST00000471037 FLRT2O43155 660 aa9.44□□□□□ -0.9
SF3A1-206ENST00000471037 TIMM44O43615 452 aa9.44□□□□□ -0.9
SF3A1-206ENST00000471037 EPHX1P07099 455 aa9.44□□□□□ -0.9
SF3A1-206ENST00000471037 ACADMP11310 421 aa9.44□□□□□ -0.9
SF3A1-206ENST00000471037 FERP16591 822 aa9.44□□□□□ -0.9
SF3A1-206ENST00000471037 CD58P19256 250 aa9.44□□□□□ -0.9
SF3A1-206ENST00000471037 FECHP22830 423 aa9.44□□□□□ -0.9
SF3A1-206ENST00000471037 PRKCHP24723 683 aa9.44□□□□□ -0.9
SF3A1-206ENST00000471037 DEKP35659 375 aaKnown RBP9.44□□□□□ -0.9
SF3A1-206ENST00000471037 SOX5P35711 763 aa9.44□□□□□ -0.9
SF3A1-206ENST00000471037 CDK17Q00537 523 aa9.44□□□□□ -0.9
SF3A1-206ENST00000471037 PDE4CQ08493 712 aa9.44□□□□□ -0.9
SF3A1-206ENST00000471037 CAMK2GQ13555 558 aaPredicted RBP9.44□□□□□ -0.9
SF3A1-206ENST00000471037 ASIC2Q16515 512 aa9.44□□□□□ -0.9
SF3A1-206ENST00000471037 MEA1Q16626 185 aa9.44□□□□□ -0.9
SF3A1-206ENST00000471037 ARHGAP44Q17R89 818 aa9.44□□□□□ -0.9
SF3A1-206ENST00000471037 HLA-BQ31612 363 aa9.44□□□□□ -0.9
SF3A1-206ENST00000471037 SFMBT2Q5VUG0 894 aa9.44□□□□□ -0.9
SF3A1-206ENST00000471037 TMEM215Q68D42 235 aa9.44□□□□□ -0.9
SF3A1-206ENST00000471037 TMPRSS7Q7RTY8 843 aa9.44□□□□□ -0.9
SF3A1-206ENST00000471037 DENND1CQ8IV53 801 aa9.44□□□□□ -0.9
SF3A1-206ENST00000471037 LRRC8AQ8IWT6 810 aa9.44□□□□□ -0.9
SF3A1-206ENST00000471037 FAM71AQ8IYT1 594 aa9.44□□□□□ -0.9
SF3A1-206ENST00000471037 SETD7Q8WTS6 366 aaKnown RBP9.44□□□□□ -0.9
SF3A1-206ENST00000471037 KAT5Q92993 513 aa9.44□□□□□ -0.9
SF3A1-206ENST00000471037 PLD4Q96BZ4 506 aa9.44□□□□□ -0.9
SF3A1-206ENST00000471037 CDC6Q99741 560 aa9.44□□□□□ -0.9
SF3A1-206ENST00000471037 CIPCQ9C0C6 399 aa9.44□□□□□ -0.9
SF3A1-206ENST00000471037 MIR1-1HGQ9H1L0 117 aa9.44□□□□□ -0.9
SF3A1-206ENST00000471037 OSGEPQ9NPF4 335 aa9.44□□□□□ -0.9
SF3A1-206ENST00000471037 TOR4AQ9NXH8 423 aa9.44□□□□□ -0.9
SF3A1-206ENST00000471037 AIPL1Q9NZN9 384 aa9.44□□□□□ -0.9
SF3A1-206ENST00000471037 MARCH2Q9P0N8 246 aa9.44□□□□□ -0.9
SF3A1-206ENST00000471037 EIF2B4Q9UI10 523 aaKnown RBP9.44□□□□□ -0.9
SF3A1-206ENST00000471037 STRIP2Q9ULQ0 834 aa9.44□□□□□ -0.9
SF3A1-206ENST00000471037 CLEC4EQ9ULY5 219 aa9.44□□□□□ -0.9
SF3A1-206ENST00000471037 CNTN6Q9UQ52 1028 aa9.44□□□□□ -0.9
SF3A1-206ENST00000471037 MUC22E2RYF6 1773 aaPredicted RBP9.44□□□□□ -0.9
SF3A1-206ENST00000471037 ADAMTS20P59510 1910 aa9.44□□□□□ -0.9
SF3A1-206ENST00000471037 FASNP49327 2511 aaKnown RBP9.43□□□□□ -0.9
SF3A1-206ENST00000471037 PLXNB3Q9ULL4 1909 aa9.43□□□□□ -0.9
SF3A1-206ENST00000471037 FOXN3O00409 490 aaPredicted RBP9.43□□□□□ -0.9
SF3A1-206ENST00000471037 HMBSP08397 361 aa9.43□□□□□ -0.9
SF3A1-206ENST00000471037 HOXD9P28356 352 aaPredicted RBP9.43□□□□□ -0.9
SF3A1-206ENST00000471037 PRKCIP41743 596 aa9.43□□□□□ -0.9
SF3A1-206ENST00000471037 GRIA4P48058 902 aa9.43□□□□□ -0.9
SF3A1-206ENST00000471037 AFF3P51826 1226 aaKnown RBP9.43□□□□□ -0.9
SF3A1-206ENST00000471037 BPIFB4P59827 614 aa9.43□□□□□ -0.9
SF3A1-206ENST00000471037 TRIP4Q15650 581 aaPredicted RBP9.43□□□□□ -0.9
SF3A1-206ENST00000471037 MPPE1Q53F39 396 aa9.43□□□□□ -0.9
SF3A1-206ENST00000471037 HS1BP3Q53T59 392 aa9.43□□□□□ -0.9
SF3A1-206ENST00000471037 ARHGAP17Q68EM7 881 aa9.43□□□□□ -0.9
SF3A1-206ENST00000471037 PM20D1Q6GTS8 502 aa9.43□□□□□ -0.9
SF3A1-206ENST00000471037 SERPINA13PQ6UXR4 307 aa9.43□□□□□ -0.9
SF3A1-206ENST00000471037 PDZD3Q86UT5 571 aa9.43□□□□□ -0.9
SF3A1-206ENST00000471037 PIGZQ86VD9 579 aa9.43□□□□□ -0.9
SF3A1-206ENST00000471037 UBR7Q8N806 425 aa9.43□□□□□ -0.9
SF3A1-206ENST00000471037 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.43□□□□□ -0.9
SF3A1-206ENST00000471037 OR2T3Q8NH03 318 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms