RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 CNNM4Q6P4Q7 775 aa6.15□□□□□ -1.42
VARS-222ENST00000470953 SLC39A4Q6P5W5 647 aa6.15□□□□□ -1.42
VARS-222ENST00000470953 TPGS1Q6ZTW0 290 aa6.15□□□□□ -1.42
VARS-222ENST00000470953 NUDT18Q6ZVK8 323 aa6.15□□□□□ -1.42
VARS-222ENST00000470953 C14orf80Q86SX3 495 aa6.15□□□□□ -1.42
VARS-222ENST00000470953 SPATS2Q86XZ4 545 aaKnown RBP6.15□□□□□ -1.42
VARS-222ENST00000470953 NT5DC4Q86YG4 428 aa6.15□□□□□ -1.42
VARS-222ENST00000470953 BRSK2Q8IWQ3 736 aa6.15□□□□□ -1.42
VARS-222ENST00000470953 TP53INP2Q8IXH6 220 aa6.15□□□□□ -1.42
VARS-222ENST00000470953 GRAMD1CQ8IYS0 662 aa6.15□□□□□ -1.42
VARS-222ENST00000470953 GPD1LQ8N335 351 aa6.15□□□□□ -1.42
VARS-222ENST00000470953 ZNF276Q8N554 614 aa6.15□□□□□ -1.42
VARS-222ENST00000470953 LRRN4CLQ8ND94 238 aa6.15□□□□□ -1.42
VARS-222ENST00000470953 GOLGA5Q8TBA6 731 aa6.15□□□□□ -1.42
VARS-222ENST00000470953 KCNN1Q92952 543 aa6.15□□□□□ -1.42
VARS-222ENST00000470953 ABHD17AQ96GS6 310 aa6.15□□□□□ -1.42
VARS-222ENST00000470953 HEXIM2Q96MH2 286 aaKnown RBP6.15□□□□□ -1.42
VARS-222ENST00000470953 FIZ1Q96SL8 496 aa6.15□□□□□ -1.42
VARS-222ENST00000470953 CBWD1Q9BRT8 395 aa6.15□□□□□ -1.42
VARS-222ENST00000470953 GZF1Q9H116 711 aaPredicted RBP6.15□□□□□ -1.42
VARS-222ENST00000470953 ABCB6Q9NP58 842 aa6.15□□□□□ -1.42
VARS-222ENST00000470953 LATS2Q9NRM7 1088 aa6.15□□□□□ -1.42
VARS-222ENST00000470953 TMEM30AQ9NV96 361 aa6.15□□□□□ -1.42
VARS-222ENST00000470953 KBTBD4Q9NVX7 518 aa6.15□□□□□ -1.42
VARS-222ENST00000470953 DPP3Q9NY33 737 aa6.15□□□□□ -1.42
VARS-222ENST00000470953 PLK2Q9NYY3 685 aa6.15□□□□□ -1.42
VARS-222ENST00000470953 TRPM5Q9NZQ8 1165 aa6.15□□□□□ -1.42
VARS-222ENST00000470953 THAP10Q9P2Z0 257 aaPredicted RBP6.15□□□□□ -1.42
VARS-222ENST00000470953 HOOK1Q9UJC3 728 aaKnown RBP6.15□□□□□ -1.42
VARS-222ENST00000470953 ENTPD2Q9Y5L3 495 aa6.15□□□□□ -1.42
VARS-222ENST00000470953 NSD1Q96L73 2696 aaPredicted RBP6.15□□□□□ -1.43
VARS-222ENST00000470953 MYH10P35580 1976 aa6.15□□□□□ -1.43
VARS-222ENST00000470953 RP1P56715 2156 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 LY6G6EA0A0G2JKS1 128 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 PVALEFA0A1B0GWK0 134 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 FAM47DPA6NHR8 397 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 ZNF233A6NK53 670 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 KPNA7A9QM74 516 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 K7EM74 188 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 EXOC3O60645 756 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 HUS1O60921 280 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 PHACTR2O75167 634 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 ITGB3P05106 788 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 MYL1P05976 194 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 SLFN14P0C7P3 912 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 DLATP10515 647 aaKnown RBP6.14□□□□□ -1.43
VARS-222ENST00000470953 CD1EP15812 388 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 TNNI1P19237 187 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 ACO1P21399 889 aaKnown RBP6.14□□□□□ -1.43
VARS-222ENST00000470953 CMA1P23946 247 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 CASP1P29466 404 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 SLC6A4P31645 630 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 DGKGP49619 791 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 PGFP49763 221 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 PDE6CP51160 858 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 CACNA2D1P54289 1103 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 BCAT1P54687 386 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 KRTAP10-9P60411 292 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 TAF10Q12962 218 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 BIRC3Q13489 604 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 CUL4BQ13620 913 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 KCNJ12Q14500 433 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 ZNF234Q14588 700 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 SURF1Q15526 300 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 CFAP221Q4G0U5 840 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 TMEM215Q68D42 235 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 TMC6Q7Z403 805 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 CDH24Q86UP0 819 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 SPATA2LQ8IUW3 424 aaPredicted RBP6.14□□□□□ -1.43
VARS-222ENST00000470953 SLC25A45Q8N413 288 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 PDCL2Q8N4E4 241 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 ZNF366Q8N895 744 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 RBBP8NLQ8NC74 664 aaPredicted RBP6.14□□□□□ -1.43
VARS-222ENST00000470953 OTUB2Q96DC9 234 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 FAM84AQ96KN4 292 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 SPATA17Q96L03 361 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 C7orf25Q9BPX7 421 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 ACBD6Q9BR61 282 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 TTLL2Q9BWV7 592 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 BBS2Q9BXC9 721 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 SLC12A9Q9BXP2 914 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 FGFBP2Q9BYJ0 223 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 MTMR12Q9C0I1 747 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 ZMYND15Q9H091 742 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 LHX5Q9H2C1 402 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 IKZF4Q9H2S9 585 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 GDPD2Q9HCC8 539 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 KIAA1586Q9HCI6 787 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 SLC39A2Q9NP94 309 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 GDF3Q9NR23 364 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 UCKL1Q9NWZ5 548 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 DDX43Q9NXZ2 648 aaKnown RBP6.14□□□□□ -1.43
VARS-222ENST00000470953 SERTAD1Q9UHV2 236 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 KCND3Q9UK17 655 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 RCOR1Q9UKL0 485 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 ITGA11Q9UKX5 1188 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 L1RE1Q9UN81 338 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 TP53TG5Q9Y2B4 290 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 SH3BP1Q9Y3L3 701 aa6.14□□□□□ -1.43
VARS-222ENST00000470953 U3KQA8 63 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms