RNA–Protein interactions for RNA: ENST00000470463.1

SND1-208, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-208ENST00000470463 KCNJ11Q14654 390 aa11.31□□□□□ -0.6
SND1-208ENST00000470463 RASA2Q15283 850 aa11.31□□□□□ -0.6
SND1-208ENST00000470463 PARP6Q2NL67 630 aa11.31□□□□□ -0.6
SND1-208ENST00000470463 C10orf120Q5SQS8 335 aa11.31□□□□□ -0.6
SND1-208ENST00000470463 TAOK1Q7L7X3 1001 aa11.31□□□□□ -0.6
SND1-208ENST00000470463 CCNJLQ8IV13 435 aa11.31□□□□□ -0.6
SND1-208ENST00000470463 TCEAL8Q8IYN2 117 aa11.31□□□□□ -0.6
SND1-208ENST00000470463 ATP11CQ8NB49 1132 aa11.31□□□□□ -0.6
SND1-208ENST00000470463 GLIS1Q8NBF1 620 aa11.31□□□□□ -0.6
SND1-208ENST00000470463 PYROXD1Q8WU10 500 aa11.31□□□□□ -0.6
SND1-208ENST00000470463 CLP1Q92989 425 aaKnown RBP11.31□□□□□ -0.6
SND1-208ENST00000470463 AZIN2Q96A70 460 aa11.31□□□□□ -0.6
SND1-208ENST00000470463 B3GALT6Q96L58 329 aa11.31□□□□□ -0.6
SND1-208ENST00000470463 FCRL2Q96LA5 508 aaPredicted RBP11.31□□□□□ -0.6
SND1-208ENST00000470463 TSGA13Q96PP4 275 aa11.31□□□□□ -0.6
SND1-208ENST00000470463 ZBED2Q9BTP6 218 aa11.31□□□□□ -0.6
SND1-208ENST00000470463 NMUR1Q9HB89 426 aa11.31□□□□□ -0.6
SND1-208ENST00000470463 RXFP1Q9HBX9 757 aa11.31□□□□□ -0.6
SND1-208ENST00000470463 SAYSD1Q9NPB0 183 aa11.31□□□□□ -0.6
SND1-208ENST00000470463 ETNK2Q9NVF9 386 aa11.31□□□□□ -0.6
SND1-208ENST00000470463 HAUS2Q9NVX0 235 aa11.31□□□□□ -0.6
SND1-208ENST00000470463 TRPM5Q9NZQ8 1165 aa11.31□□□□□ -0.6
SND1-208ENST00000470463 HCSTQ9UBK5 93 aa11.31□□□□□ -0.6
SND1-208ENST00000470463 XPO7Q9UIA9 1087 aaKnown RBP11.31□□□□□ -0.6
SND1-208ENST00000470463 DNMT3LQ9UJW3 386 aa11.31□□□□□ -0.6
SND1-208ENST00000470463 SLC27A5Q9Y2P5 690 aa11.31□□□□□ -0.6
SND1-208ENST00000470463 CUL9Q8IWT3 2517 aa11.31□□□□□ -0.6
SND1-208ENST00000470463 PRRG1O14668 218 aa11.3□□□□□ -0.6
SND1-208ENST00000470463 RGS16O15492 202 aaPredicted RBP11.3□□□□□ -0.6
SND1-208ENST00000470463 TLR5O60602 858 aa11.3□□□□□ -0.6
SND1-208ENST00000470463 IGLV3-27P01718 113 aa11.3□□□□□ -0.6
SND1-208ENST00000470463 CTSAP10619 480 aa11.3□□□□□ -0.6
SND1-208ENST00000470463 CCNCP24863 283 aa11.3□□□□□ -0.6
SND1-208ENST00000470463 ITGB8P26012 769 aa11.3□□□□□ -0.6
SND1-208ENST00000470463 CHKAP35790 457 aa11.3□□□□□ -0.6
SND1-208ENST00000470463 GARSP41250 739 aaKnown RBP11.3□□□□□ -0.6
SND1-208ENST00000470463 GPR15P49685 360 aa11.3□□□□□ -0.6
SND1-208ENST00000470463 NDST2P52849 883 aa11.3□□□□□ -0.6
SND1-208ENST00000470463 USP46P62068 366 aa11.3□□□□□ -0.6
SND1-208ENST00000470463 PDIA2Q13087 525 aaKnown RBP11.3□□□□□ -0.6
SND1-208ENST00000470463 SEMA5AQ13591 1074 aa11.3□□□□□ -0.6
SND1-208ENST00000470463 ANO4Q32M45 955 aa11.3□□□□□ -0.6
SND1-208ENST00000470463 CCDC38Q502W7 563 aa11.3□□□□□ -0.6
SND1-208ENST00000470463 ANKRD20A2Q5SQ80 823 aa11.3□□□□□ -0.6
SND1-208ENST00000470463 ANKRD20A1Q5TYW2 823 aa11.3□□□□□ -0.6
SND1-208ENST00000470463 MANEALQ5VSG8 457 aa11.3□□□□□ -0.6
SND1-208ENST00000470463 ANKRD20A3Q5VUR7 823 aa11.3□□□□□ -0.6
SND1-208ENST00000470463 RWDD4Q6NW29 188 aaKnown RBP11.3□□□□□ -0.6
SND1-208ENST00000470463 RSPO2Q6UXX9 243 aaPredicted RBP11.3□□□□□ -0.6
SND1-208ENST00000470463 CCDC149Q6ZUS6 474 aa11.3□□□□□ -0.6
SND1-208ENST00000470463 OTOP2Q7RTS6 562 aa11.3□□□□□ -0.6
SND1-208ENST00000470463 RTL3Q8N8U3 475 aaKnown RBP11.3□□□□□ -0.6
SND1-208ENST00000470463 FATE1Q969F0 183 aa11.3□□□□□ -0.6
SND1-208ENST00000470463 PLD4Q96BZ4 506 aa11.3□□□□□ -0.6
SND1-208ENST00000470463 ZNF512Q96ME7 567 aaPredicted RBP11.3□□□□□ -0.6
SND1-208ENST00000470463 RAD9AQ99638 391 aa11.3□□□□□ -0.6
SND1-208ENST00000470463 DDX50Q9BQ39 737 aaKnown RBP11.3□□□□□ -0.6
SND1-208ENST00000470463 VN1R3Q9BXE9 311 aa11.3□□□□□ -0.6
SND1-208ENST00000470463 EPB41L4BQ9H329 900 aa11.3□□□□□ -0.6
SND1-208ENST00000470463 PRDM12Q9H4Q4 367 aa11.3□□□□□ -0.6
SND1-208ENST00000470463 CNOT10Q9H9A5 744 aaKnown RBP11.3□□□□□ -0.6
SND1-208ENST00000470463 CYP4F11Q9HBI6 524 aa11.3□□□□□ -0.6
SND1-208ENST00000470463 NINJ2Q9NZG7 142 aa11.3□□□□□ -0.6
SND1-208ENST00000470463 IGSF9Q9P2J2 1179 aa11.3□□□□□ -0.6
SND1-208ENST00000470463 SFMBT1Q9UHJ3 866 aa11.3□□□□□ -0.6
SND1-208ENST00000470463 ADAM21Q9UKJ8 722 aa11.3□□□□□ -0.6
SND1-208ENST00000470463 COL4A6Q14031 1691 aa11.3□□□□□ -0.6
SND1-208ENST00000470463 MYO16Q9Y6X6 1858 aa11.29□□□□□ -0.6
SND1-208ENST00000470463 E9PAM4 449 aa11.29□□□□□ -0.6
SND1-208ENST00000470463 FAM72CH0Y354 149 aa11.29□□□□□ -0.6
SND1-208ENST00000470463 RNF103O00237 685 aa11.29□□□□□ -0.6
SND1-208ENST00000470463 C2CD2LO14523 706 aa11.29□□□□□ -0.6
SND1-208ENST00000470463 CDH16O75309 829 aa11.29□□□□□ -0.6
SND1-208ENST00000470463 FGF18O76093 207 aa11.29□□□□□ -0.6
SND1-208ENST00000470463 VNN2O95498 520 aa11.29□□□□□ -0.6
SND1-208ENST00000470463 ACSL3O95573 720 aa11.29□□□□□ -0.6
SND1-208ENST00000470463 LATS1O95835 1130 aa11.29□□□□□ -0.6
SND1-208ENST00000470463 RHOQP17081 205 aa11.29□□□□□ -0.6
SND1-208ENST00000470463 PFKLP17858 780 aa11.29□□□□□ -0.6
SND1-208ENST00000470463 ATF6P18850 670 aa11.29□□□□□ -0.6
SND1-208ENST00000470463 LMAN1P49257 510 aa11.29□□□□□ -0.6
SND1-208ENST00000470463 SLC11A2P49281 568 aa11.29□□□□□ -0.6
SND1-208ENST00000470463 HARS2P49590 506 aaKnown RBP11.29□□□□□ -0.6
SND1-208ENST00000470463 UBE3AQ05086 875 aa11.29□□□□□ -0.6
SND1-208ENST00000470463 EFEMP1Q12805 493 aa11.29□□□□□ -0.6
SND1-208ENST00000470463 PRPSAP1Q14558 356 aa11.29□□□□□ -0.6
SND1-208ENST00000470463 KYNUQ16719 465 aa11.29□□□□□ -0.6
SND1-208ENST00000470463 KLHL38Q2WGJ6 581 aa11.29□□□□□ -0.6
SND1-208ENST00000470463 HECTD3Q5T447 861 aa11.29□□□□□ -0.6
SND1-208ENST00000470463 FAM72AQ5TYM5 149 aa11.29□□□□□ -0.6
SND1-208ENST00000470463 SDHAF4Q5VUM1 108 aa11.29□□□□□ -0.6
SND1-208ENST00000470463 ARMC3Q5W041 872 aa11.29□□□□□ -0.6
SND1-208ENST00000470463 FAM72DQ6L9T8 149 aa11.29□□□□□ -0.6
SND1-208ENST00000470463 FAM72BQ86X60 149 aa11.29□□□□□ -0.6
SND1-208ENST00000470463 TDRPQ86YL5 185 aa11.29□□□□□ -0.6
SND1-208ENST00000470463 PALM2Q8IXS6 379 aa11.29□□□□□ -0.6
SND1-208ENST00000470463 CCDC13Q8IYE1 715 aa11.29□□□□□ -0.6
SND1-208ENST00000470463 ZBED8Q8IZ13 594 aa11.29□□□□□ -0.6
SND1-208ENST00000470463 TTC9BQ8N6N2 239 aa11.29□□□□□ -0.6
SND1-208ENST00000470463 SP7Q8TDD2 431 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms