RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 LETM1O95202 739 aaPredicted RBP18.12■□□□□ 0.49
COL7A1-208ENST00000470076 APOEP02649 317 aa18.12■□□□□ 0.49
COL7A1-208ENST00000470076 CSKP41240 450 aa18.12■□□□□ 0.49
COL7A1-208ENST00000470076 BNC1Q01954 994 aa18.12■□□□□ 0.49
COL7A1-208ENST00000470076 ARID5BQ14865 1188 aa18.12■□□□□ 0.49
COL7A1-208ENST00000470076 TEAD4Q15561 434 aa18.12■□□□□ 0.49
COL7A1-208ENST00000470076 HLA-BQ31612 363 aa18.12■□□□□ 0.49
COL7A1-208ENST00000470076 HNRNPA1L2Q32P51 320 aaKnown RBP18.12■□□□□ 0.49
COL7A1-208ENST00000470076 SYPL2Q5VXT5 272 aa18.12■□□□□ 0.49
COL7A1-208ENST00000470076 DENND1BQ6P3S1 775 aa18.12■□□□□ 0.49
COL7A1-208ENST00000470076 GLRX5Q86SX6 157 aa18.12■□□□□ 0.49
COL7A1-208ENST00000470076 TMEM110Q86TL2 294 aa18.12■□□□□ 0.49
COL7A1-208ENST00000470076 TAC4Q86UU9 113 aa18.12■□□□□ 0.49
COL7A1-208ENST00000470076 CARNMT1Q8N4J0 409 aa18.12■□□□□ 0.49
COL7A1-208ENST00000470076 ADAM32Q8TC27 787 aa18.12■□□□□ 0.49
COL7A1-208ENST00000470076 ZNF606Q8WXB4 792 aa18.12■□□□□ 0.49
COL7A1-208ENST00000470076 MYO19Q96H55 970 aa18.12■□□□□ 0.49
COL7A1-208ENST00000470076 FAM81BQ96LP2 452 aa18.12■□□□□ 0.49
COL7A1-208ENST00000470076 MED15Q96RN5 788 aa18.12■□□□□ 0.49
COL7A1-208ENST00000470076 NUCKS1Q9H1E3 243 aaKnown RBP18.12■□□□□ 0.49
COL7A1-208ENST00000470076 IL21RQ9HBE5 538 aa18.12■□□□□ 0.49
COL7A1-208ENST00000470076 POPDC2Q9HBU9 364 aa18.12■□□□□ 0.49
COL7A1-208ENST00000470076 PCOLCE2Q9UKZ9 415 aa18.12■□□□□ 0.49
COL7A1-208ENST00000470076 INTS6Q9UL03 887 aaKnown RBP18.12■□□□□ 0.49
COL7A1-208ENST00000470076 NCKAP1Q9Y2A7 1128 aa18.12■□□□□ 0.49
COL7A1-208ENST00000470076 PCDHGB2Q9Y5G2 931 aa18.12■□□□□ 0.49
COL7A1-208ENST00000470076 ANKRD11Q6UB99 2663 aaPredicted RBP18.12■□□□□ 0.49
COL7A1-208ENST00000470076 SPEGQ15772 3267 aa18.11■□□□□ 0.49
COL7A1-208ENST00000470076 A0A1B0GVT2 93 aa18.11■□□□□ 0.49
COL7A1-208ENST00000470076 PAPSS1O43252 624 aaPredicted RBP18.11■□□□□ 0.49
COL7A1-208ENST00000470076 RNASEH1O60930 286 aaKnown RBP18.11■□□□□ 0.49
COL7A1-208ENST00000470076 CBFA2T3O75081 653 aa18.11■□□□□ 0.49
COL7A1-208ENST00000470076 GADD45BO75293 160 aaPredicted RBP18.11■□□□□ 0.49
COL7A1-208ENST00000470076 MOCS3O95396 460 aa18.11■□□□□ 0.49
COL7A1-208ENST00000470076 MOCS2O96007 188 aaPredicted RBP18.11■□□□□ 0.49
COL7A1-208ENST00000470076 FTH1P19P0C7X4 201 aa18.11■□□□□ 0.49
COL7A1-208ENST00000470076 GNA15P30679 374 aa18.11■□□□□ 0.49
COL7A1-208ENST00000470076 CSNK1EP49674 416 aaKnown RBP18.11■□□□□ 0.49
COL7A1-208ENST00000470076 YWHAZP63104 245 aaKnown RBP18.11■□□□□ 0.49
COL7A1-208ENST00000470076 SFSWAPQ12872 951 aaKnown RBP18.11■□□□□ 0.49
COL7A1-208ENST00000470076 DCAF6Q58WW2 860 aa18.11■□□□□ 0.49
COL7A1-208ENST00000470076 USP30Q70CQ3 517 aa18.11■□□□□ 0.49
COL7A1-208ENST00000470076 SETD7Q8WTS6 366 aaKnown RBP18.11■□□□□ 0.49
COL7A1-208ENST00000470076 ADAMTS14Q8WXS8 1223 aa18.11■□□□□ 0.49
COL7A1-208ENST00000470076 ZCCHC14Q8WYQ9 949 aaKnown RBP18.11■□□□□ 0.49
COL7A1-208ENST00000470076 BIRC7Q96CA5 298 aa18.11■□□□□ 0.49
COL7A1-208ENST00000470076 MYEOVQ96EZ4 313 aa18.11■□□□□ 0.49
COL7A1-208ENST00000470076 THAP9Q9H5L6 903 aa18.11■□□□□ 0.49
COL7A1-208ENST00000470076 APOBEC2Q9Y235 224 aaKnown RBP18.11■□□□□ 0.49
COL7A1-208ENST00000470076 FNDC3AQ9Y2H6 1198 aaKnown RBP18.11■□□□□ 0.49
COL7A1-208ENST00000470076 DSPP15924 2871 aaKnown RBP18.11■□□□□ 0.49
COL7A1-208ENST00000470076 E5RJQ4 531 aa18.1■□□□□ 0.49
COL7A1-208ENST00000470076 THAP12O43422 761 aa18.1■□□□□ 0.49
COL7A1-208ENST00000470076 LUC7L3O95232 432 aaKnown RBP18.1■□□□□ 0.49
COL7A1-208ENST00000470076 SRPRAP08240 638 aaKnown RBP18.1■□□□□ 0.49
COL7A1-208ENST00000470076 CD27P26842 260 aa18.1■□□□□ 0.49
COL7A1-208ENST00000470076 GRIA4P48058 902 aa18.1■□□□□ 0.49
COL7A1-208ENST00000470076 FSCBQ5H9T9 825 aa18.1■□□□□ 0.49
COL7A1-208ENST00000470076 PITRM1Q5JRX3 1037 aa18.1■□□□□ 0.49
COL7A1-208ENST00000470076 TRIM65Q6PJ69 517 aa18.1■□□□□ 0.49
COL7A1-208ENST00000470076 DBX2Q6ZNG2 339 aa18.1■□□□□ 0.49
COL7A1-208ENST00000470076 CFAP52Q8N1V2 620 aa18.1■□□□□ 0.49
COL7A1-208ENST00000470076 BTN2A3PQ96KV6 586 aa18.1■□□□□ 0.49
COL7A1-208ENST00000470076 MRGPRX3Q96LB0 322 aa18.1■□□□□ 0.49
COL7A1-208ENST00000470076 PABPC3Q9H361 631 aaKnown RBP18.1■□□□□ 0.49
COL7A1-208ENST00000470076 MTG2Q9H4K7 406 aa18.1■□□□□ 0.49
COL7A1-208ENST00000470076 TM9SF3Q9HD45 589 aa18.1■□□□□ 0.49
COL7A1-208ENST00000470076 KIAA1522Q9P206 1035 aaPredicted RBP18.1■□□□□ 0.49
COL7A1-208ENST00000470076 TJP2Q9UDY2 1190 aa18.1■□□□□ 0.49
COL7A1-208ENST00000470076 CYTH4Q9UIA0 394 aa18.1■□□□□ 0.49
COL7A1-208ENST00000470076 SLCO1B1Q9Y6L6 691 aa18.1■□□□□ 0.49
COL7A1-208ENST00000470076 ZFYVE26Q68DK2 2539 aa18.09■□□□□ 0.49
COL7A1-208ENST00000470076 FREM2Q5SZK8 3169 aa18.09■□□□□ 0.49
COL7A1-208ENST00000470076 TARSL2A2RTX5 802 aaKnown RBP18.09■□□□□ 0.49
COL7A1-208ENST00000470076 FLRT2O43155 660 aa18.09■□□□□ 0.49
COL7A1-208ENST00000470076 SIN3BO75182 1162 aa18.09■□□□□ 0.49
COL7A1-208ENST00000470076 FSBPO95073 299 aa18.09■□□□□ 0.49
COL7A1-208ENST00000470076 TRUB2O95900 331 aaKnown RBP18.09■□□□□ 0.49
COL7A1-208ENST00000470076 IGLV3-25P01717 112 aa18.09■□□□□ 0.49
COL7A1-208ENST00000470076 PDCLQ13371 301 aa18.09■□□□□ 0.49
COL7A1-208ENST00000470076 SUZ12Q15022 739 aaKnown RBP18.09■□□□□ 0.49
COL7A1-208ENST00000470076 KIF19Q2TAC6 998 aa18.09■□□□□ 0.49
COL7A1-208ENST00000470076 ZC3H12AQ5D1E8 599 aaKnown RBP18.09■□□□□ 0.49
COL7A1-208ENST00000470076 CHSY1Q86X52 802 aa18.09■□□□□ 0.49
COL7A1-208ENST00000470076 LGI2Q8N0V4 545 aa18.09■□□□□ 0.49
COL7A1-208ENST00000470076 GANCQ8TET4 914 aa18.09■□□□□ 0.49
COL7A1-208ENST00000470076 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.09■□□□□ 0.49
COL7A1-208ENST00000470076 FBXL12Q9NXK8 326 aa18.09■□□□□ 0.49
COL7A1-208ENST00000470076 SLC12A6Q9UHW9 1150 aa18.09■□□□□ 0.49
COL7A1-208ENST00000470076 XPO7Q9UIA9 1087 aaKnown RBP18.09■□□□□ 0.49
COL7A1-208ENST00000470076 RWDD2AQ9UIY3 292 aa18.09■□□□□ 0.49
COL7A1-208ENST00000470076 ERVW-1Q9UQF0 538 aa18.09■□□□□ 0.49
COL7A1-208ENST00000470076 TMEM131Q92545 1883 aa18.08■□□□□ 0.49
COL7A1-208ENST00000470076 ITIH6Q6UXX5 1313 aa18.08■□□□□ 0.49
COL7A1-208ENST00000470076 SRRM3A6NNA2 597 aaPredicted RBP18.08■□□□□ 0.48
COL7A1-208ENST00000470076 TACR2P21452 398 aa18.08■□□□□ 0.48
COL7A1-208ENST00000470076 ECT2LQ008S8 904 aa18.08■□□□□ 0.48
COL7A1-208ENST00000470076 CST6Q15828 149 aa18.08■□□□□ 0.48
COL7A1-208ENST00000470076 RNF219Q5W0B1 726 aaPredicted RBP18.08■□□□□ 0.48
COL7A1-208ENST00000470076 RAP1GAP2Q684P5 730 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms