RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 SEMA4CQ9C0C4 833 aa19.72■□□□□ 0.75
NCKIPSD-209ENST00000470006 NIF3L1Q9GZT8 377 aa19.72■□□□□ 0.75
NCKIPSD-209ENST00000470006 ERVMER34-1Q9H9K5 563 aa19.72■□□□□ 0.75
NCKIPSD-209ENST00000470006 MORC2Q9Y6X9 1032 aaPredicted RBP19.72■□□□□ 0.75
NCKIPSD-209ENST00000470006 SPTLC2O15270 562 aa19.71■□□□□ 0.75
NCKIPSD-209ENST00000470006 POLR2DO15514 142 aaKnown RBP19.71■□□□□ 0.75
NCKIPSD-209ENST00000470006 KLK10O43240 276 aa19.71■□□□□ 0.75
NCKIPSD-209ENST00000470006 NR3C1P04150 777 aa19.71■□□□□ 0.75
NCKIPSD-209ENST00000470006 MPOP05164 745 aa19.71■□□□□ 0.75
NCKIPSD-209ENST00000470006 SYT1P21579 422 aa19.71■□□□□ 0.75
NCKIPSD-209ENST00000470006 ACP1P24666 158 aa19.71■□□□□ 0.75
NCKIPSD-209ENST00000470006 RXRGP48443 463 aa19.71■□□□□ 0.75
NCKIPSD-209ENST00000470006 HNRNPA1L2Q32P51 320 aaKnown RBP19.71■□□□□ 0.75
NCKIPSD-209ENST00000470006 C8orf34Q49A92 452 aa19.71■□□□□ 0.75
NCKIPSD-209ENST00000470006 RFFLQ8WZ73 363 aa19.71■□□□□ 0.75
NCKIPSD-209ENST00000470006 IPO9Q96P70 1041 aaKnown RBP19.71■□□□□ 0.75
NCKIPSD-209ENST00000470006 BACH2Q9BYV9 841 aa19.71■□□□□ 0.75
NCKIPSD-209ENST00000470006 UBXN6Q9BZV1 441 aa19.71■□□□□ 0.75
NCKIPSD-209ENST00000470006 LRRC4Q9HBW1 653 aa19.71■□□□□ 0.75
NCKIPSD-209ENST00000470006 DMAC2Q9NW81 257 aa19.71■□□□□ 0.75
NCKIPSD-209ENST00000470006 FZD4Q9ULV1 537 aa19.71■□□□□ 0.75
NCKIPSD-209ENST00000470006 CEP83Q9Y592 693 aa19.71■□□□□ 0.75
NCKIPSD-209ENST00000470006 PCDHB1Q9Y5F3 818 aa19.71■□□□□ 0.75
NCKIPSD-209ENST00000470006 SPTA1P02549 2419 aa19.71■□□□□ 0.75
NCKIPSD-209ENST00000470006 PVALEFA0A1B0GWK0 134 aa19.7■□□□□ 0.74
NCKIPSD-209ENST00000470006 MSI1O43347 362 aaKnown RBP19.7■□□□□ 0.74
NCKIPSD-209ENST00000470006 SLC28A2O43868 658 aa19.7■□□□□ 0.74
NCKIPSD-209ENST00000470006 C6P13671 934 aa19.7■□□□□ 0.74
NCKIPSD-209ENST00000470006 CSKP41240 450 aa19.7■□□□□ 0.74
NCKIPSD-209ENST00000470006 GCLMP48507 274 aa19.7■□□□□ 0.74
NCKIPSD-209ENST00000470006 VAMP7P51809 220 aa19.7■□□□□ 0.74
NCKIPSD-209ENST00000470006 CUL4BQ13620 913 aa19.7■□□□□ 0.74
NCKIPSD-209ENST00000470006 RAB41Q5JT25 222 aa19.7■□□□□ 0.74
NCKIPSD-209ENST00000470006 SFMBT2Q5VUG0 894 aa19.7■□□□□ 0.74
NCKIPSD-209ENST00000470006 PRPF39Q86UA1 669 aaKnown RBP19.7■□□□□ 0.74
NCKIPSD-209ENST00000470006 SLC9A9Q8IVB4 645 aa19.7■□□□□ 0.74
NCKIPSD-209ENST00000470006 CCDC117Q8IWD4 279 aaPredicted RBP19.7■□□□□ 0.74
NCKIPSD-209ENST00000470006 ZNF557Q8N988 423 aaPredicted RBP19.7■□□□□ 0.74
NCKIPSD-209ENST00000470006 KCNE4Q8WWG9 221 aa19.7■□□□□ 0.74
NCKIPSD-209ENST00000470006 MAGEF1Q9HAY2 307 aa19.7■□□□□ 0.74
NCKIPSD-209ENST00000470006 GOLGA6L7A0A1B0GV03 622 aa19.69■□□□□ 0.74
NCKIPSD-209ENST00000470006 TYW5A2RUC4 315 aaKnown RBP19.69■□□□□ 0.74
NCKIPSD-209ENST00000470006 SIGLEC6O43699 453 aa19.69■□□□□ 0.74
NCKIPSD-209ENST00000470006 MAGEC1O60732 1142 aa19.69■□□□□ 0.74
NCKIPSD-209ENST00000470006 LATS1O95835 1130 aa19.69■□□□□ 0.74
NCKIPSD-209ENST00000470006 ASLP04424 464 aa19.69■□□□□ 0.74
NCKIPSD-209ENST00000470006 GOT1P17174 413 aa19.69■□□□□ 0.74
NCKIPSD-209ENST00000470006 GABREP78334 506 aa19.69■□□□□ 0.74
NCKIPSD-209ENST00000470006 PKDCCQ504Y2 493 aa19.69■□□□□ 0.74
NCKIPSD-209ENST00000470006 LSMEM2Q8N112 164 aa19.69■□□□□ 0.74
NCKIPSD-209ENST00000470006 CARNMT1Q8N4J0 409 aa19.69■□□□□ 0.74
NCKIPSD-209ENST00000470006 MFSD2AQ8NA29 543 aa19.69■□□□□ 0.74
NCKIPSD-209ENST00000470006 LINC00301Q8NCQ3 95 aa19.69■□□□□ 0.74
NCKIPSD-209ENST00000470006 TAS1R2Q8TE23 839 aa19.69■□□□□ 0.74
NCKIPSD-209ENST00000470006 UPF2Q9HAU5 1272 aaKnown RBP19.69■□□□□ 0.74
NCKIPSD-209ENST00000470006 STOML2Q9UJZ1 356 aa19.69■□□□□ 0.74
NCKIPSD-209ENST00000470006 PIEZO2Q9H5I5 2752 aa19.68■□□□□ 0.74
NCKIPSD-209ENST00000470006 TTC34A8MYJ7 566 aa19.68■□□□□ 0.74
NCKIPSD-209ENST00000470006 IL1BP01584 269 aa19.68■□□□□ 0.74
NCKIPSD-209ENST00000470006 TRIM49P0CI25 452 aa19.68■□□□□ 0.74
NCKIPSD-209ENST00000470006 TRIM49CP0CI26 452 aa19.68■□□□□ 0.74
NCKIPSD-209ENST00000470006 MAT2AP31153 395 aaKnown RBP19.68■□□□□ 0.74
NCKIPSD-209ENST00000470006 SLC11A2P49281 568 aa19.68■□□□□ 0.74
NCKIPSD-209ENST00000470006 NASPP49321 788 aaPredicted RBP19.68■□□□□ 0.74
NCKIPSD-209ENST00000470006 ADPRHP54922 357 aa19.68■□□□□ 0.74
NCKIPSD-209ENST00000470006 PROX2Q3B8N5 592 aa19.68■□□□□ 0.74
NCKIPSD-209ENST00000470006 C1orf220Q5T0J3 134 aa19.68■□□□□ 0.74
NCKIPSD-209ENST00000470006 C9orf64Q5T6V5 341 aa19.68■□□□□ 0.74
NCKIPSD-209ENST00000470006 PIK3R6Q5UE93 754 aa19.68■□□□□ 0.74
NCKIPSD-209ENST00000470006 RNF219Q5W0B1 726 aaPredicted RBP19.68■□□□□ 0.74
NCKIPSD-209ENST00000470006 BSPRYQ5W0U4 402 aa19.68■□□□□ 0.74
NCKIPSD-209ENST00000470006 PM20D1Q6GTS8 502 aa19.68■□□□□ 0.74
NCKIPSD-209ENST00000470006 NAPEPLDQ6IQ20 393 aa19.68■□□□□ 0.74
NCKIPSD-209ENST00000470006 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.68■□□□□ 0.74
NCKIPSD-209ENST00000470006 SPATS2Q86XZ4 545 aaKnown RBP19.68■□□□□ 0.74
NCKIPSD-209ENST00000470006 AADATQ8N5Z0 425 aa19.68■□□□□ 0.74
NCKIPSD-209ENST00000470006 ANKRD52Q8NB46 1076 aa19.68■□□□□ 0.74
NCKIPSD-209ENST00000470006 TTC17Q96AE7 1141 aa19.68■□□□□ 0.74
NCKIPSD-209ENST00000470006 MYO19Q96H55 970 aa19.68■□□□□ 0.74
NCKIPSD-209ENST00000470006 ZSCAN16Q9H4T2 348 aaPredicted RBP19.68■□□□□ 0.74
NCKIPSD-209ENST00000470006 EXOC1Q9NV70 894 aa19.68■□□□□ 0.74
NCKIPSD-209ENST00000470006 TPX2Q9ULW0 747 aaKnown RBP19.68■□□□□ 0.74
NCKIPSD-209ENST00000470006 EDDM13A0A1B0GTR0 161 aa19.67■□□□□ 0.74
NCKIPSD-209ENST00000470006 TARSL2A2RTX5 802 aaKnown RBP19.67■□□□□ 0.74
NCKIPSD-209ENST00000470006 USP12O75317 370 aa19.67■□□□□ 0.74
NCKIPSD-209ENST00000470006 WISP1O95388 367 aa19.67■□□□□ 0.74
NCKIPSD-209ENST00000470006 ADH1BP00325 375 aa19.67■□□□□ 0.74
NCKIPSD-209ENST00000470006 PPP2CBP62714 309 aa19.67■□□□□ 0.74
NCKIPSD-209ENST00000470006 PPP2CAP67775 309 aa19.67■□□□□ 0.74
NCKIPSD-209ENST00000470006 ADIGQ0VDE8 80 aa19.67■□□□□ 0.74
NCKIPSD-209ENST00000470006 STK4Q13043 487 aa19.67■□□□□ 0.74
NCKIPSD-209ENST00000470006 ZNF211Q13398 564 aaPredicted RBP19.67■□□□□ 0.74
NCKIPSD-209ENST00000470006 STAT4Q14765 748 aa19.67■□□□□ 0.74
NCKIPSD-209ENST00000470006 MPP7Q5T2T1 576 aa19.67■□□□□ 0.74
NCKIPSD-209ENST00000470006 KANSL1Q7Z3B3 1105 aa19.67■□□□□ 0.74
NCKIPSD-209ENST00000470006 PRICKLE2Q7Z3G6 844 aa19.67■□□□□ 0.74
NCKIPSD-209ENST00000470006 TMC6Q7Z403 805 aa19.67■□□□□ 0.74
NCKIPSD-209ENST00000470006 SIX6OS1Q8N1H7 587 aa19.67■□□□□ 0.74
NCKIPSD-209ENST00000470006 STK40Q8N2I9 435 aa19.67■□□□□ 0.74
NCKIPSD-209ENST00000470006 SLC4A11Q8NBS3 891 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms