RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 TWF1Q12792 350 aa18.65■□□□□ 0.58
SMC4-211ENST00000469858 VEPH1Q14D04 833 aa18.65■□□□□ 0.58
SMC4-211ENST00000469858 SKIDA1Q1XH10 827 aa18.65■□□□□ 0.58
SMC4-211ENST00000469858 MSS51Q4VC12 460 aa18.65■□□□□ 0.58
SMC4-211ENST00000469858 HERC6Q8IVU3 1022 aa18.65■□□□□ 0.58
SMC4-211ENST00000469858 CCDC13Q8IYE1 715 aa18.65■□□□□ 0.58
SMC4-211ENST00000469858 KLHL23Q8NBE8 558 aa18.65■□□□□ 0.58
SMC4-211ENST00000469858 CLP1Q92989 425 aaKnown RBP18.65■□□□□ 0.58
SMC4-211ENST00000469858 C1orf74Q96LT6 269 aa18.65■□□□□ 0.58
SMC4-211ENST00000469858 NACA2Q9H009 215 aa18.65■□□□□ 0.58
SMC4-211ENST00000469858 MPP6Q9NZW5 540 aa18.65■□□□□ 0.58
SMC4-211ENST00000469858 SLC12A6Q9UHW9 1150 aa18.65■□□□□ 0.58
SMC4-211ENST00000469858 VANGL2Q9ULK5 521 aa18.65■□□□□ 0.58
SMC4-211ENST00000469858 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.65■□□□□ 0.58
SMC4-211ENST00000469858 SLC4A7Q9Y6M7 1214 aa18.65■□□□□ 0.58
SMC4-211ENST00000469858 TLDC2A0PJX2 215 aa18.64■□□□□ 0.58
SMC4-211ENST00000469858 F5H423 210 aaPredicted RBP18.64■□□□□ 0.58
SMC4-211ENST00000469858 KCNK1O00180 336 aa18.64■□□□□ 0.58
SMC4-211ENST00000469858 CTSAP10619 480 aa18.64■□□□□ 0.58
SMC4-211ENST00000469858 GARSP41250 739 aaKnown RBP18.64■□□□□ 0.58
SMC4-211ENST00000469858 NRG1Q02297 640 aaPredicted RBP18.64■□□□□ 0.58
SMC4-211ENST00000469858 PPIDQ08752 370 aaKnown RBP18.64■□□□□ 0.58
SMC4-211ENST00000469858 MS4A13Q5J8X5 152 aa18.64■□□□□ 0.58
SMC4-211ENST00000469858 ARTNQ5T4W7 220 aa18.64■□□□□ 0.58
SMC4-211ENST00000469858 ANKMY2Q8IV38 441 aa18.64■□□□□ 0.58
SMC4-211ENST00000469858 PDIK1LQ8N165 341 aa18.64■□□□□ 0.58
SMC4-211ENST00000469858 FAM76AQ8TAV0 307 aa18.64■□□□□ 0.58
SMC4-211ENST00000469858 EPS8L3Q8TE67 593 aaKnown RBP18.64■□□□□ 0.58
SMC4-211ENST00000469858 OVCA2Q8WZ82 227 aa18.64■□□□□ 0.58
SMC4-211ENST00000469858 HDAC11Q96DB2 347 aa18.64■□□□□ 0.58
SMC4-211ENST00000469858 BTN2A3PQ96KV6 586 aa18.64■□□□□ 0.58
SMC4-211ENST00000469858 FNIP2Q9P278 1114 aa18.64■□□□□ 0.58
SMC4-211ENST00000469858 INSL5Q9Y5Q6 135 aa18.64■□□□□ 0.58
SMC4-211ENST00000469858 ANAPC1Q9H1A4 1944 aa18.64■□□□□ 0.57
SMC4-211ENST00000469858 LCHNA4D1U4 455 aa18.64■□□□□ 0.57
SMC4-211ENST00000469858 ZNF840PA6NDX5 716 aa18.64■□□□□ 0.57
SMC4-211ENST00000469858 HMGB1P1B2RPK0 211 aaPredicted RBP18.64■□□□□ 0.57
SMC4-211ENST00000469858 ALOX15BO15296 676 aa18.64■□□□□ 0.57
SMC4-211ENST00000469858 TLL1O43897 1013 aa18.64■□□□□ 0.57
SMC4-211ENST00000469858 LILRB3O75022 631 aa18.64■□□□□ 0.57
SMC4-211ENST00000469858 CSPG5O95196 566 aa18.64■□□□□ 0.57
SMC4-211ENST00000469858 IGLV3-27P01718 113 aa18.64■□□□□ 0.57
SMC4-211ENST00000469858 SPATA31D3P0C874 917 aa18.64■□□□□ 0.57
SMC4-211ENST00000469858 ATP5C1P36542 298 aaKnown RBP18.64■□□□□ 0.57
SMC4-211ENST00000469858 SLCO1A2P46721 670 aa18.64■□□□□ 0.57
SMC4-211ENST00000469858 CREMQ03060 361 aa18.64■□□□□ 0.57
SMC4-211ENST00000469858 WASHC5Q12768 1159 aa18.64■□□□□ 0.57
SMC4-211ENST00000469858 BBS9Q3SYG4 887 aa18.64■□□□□ 0.57
SMC4-211ENST00000469858 PPP1R21Q6ZMI0 780 aa18.64■□□□□ 0.57
SMC4-211ENST00000469858 SPATA31D4Q6ZUB0 917 aa18.64■□□□□ 0.57
SMC4-211ENST00000469858 TTC25Q96NG3 672 aa18.64■□□□□ 0.57
SMC4-211ENST00000469858 CDK5RAP1Q96SZ6 601 aaKnown RBP18.64■□□□□ 0.57
SMC4-211ENST00000469858 PHACTR1Q9C0D0 580 aa18.64■□□□□ 0.57
SMC4-211ENST00000469858 STK39Q9UEW8 545 aa18.64■□□□□ 0.57
SMC4-211ENST00000469858 ADAM21Q9UKJ8 722 aa18.64■□□□□ 0.57
SMC4-211ENST00000469858 ZMYND8Q9ULU4 1186 aaPredicted RBP18.64■□□□□ 0.57
SMC4-211ENST00000469858 E7EVH7 732 aa18.63■□□□□ 0.57
SMC4-211ENST00000469858 DFFAO00273 331 aa18.63■□□□□ 0.57
SMC4-211ENST00000469858 OPHN1O60890 802 aa18.63■□□□□ 0.57
SMC4-211ENST00000469858 CNPP09543 421 aaKnown RBP18.63■□□□□ 0.57
SMC4-211ENST00000469858 RING1Q06587 406 aa18.63■□□□□ 0.57
SMC4-211ENST00000469858 AUHQ13825 339 aaKnown RBP18.63■□□□□ 0.57
SMC4-211ENST00000469858 CAPN12Q6ZSI9 719 aa18.63■□□□□ 0.57
SMC4-211ENST00000469858 TADA2BQ86TJ2 420 aa18.63■□□□□ 0.57
SMC4-211ENST00000469858 TCEAL8Q8IYN2 117 aa18.63■□□□□ 0.57
SMC4-211ENST00000469858 ZNF567Q8N184 647 aa18.63■□□□□ 0.57
SMC4-211ENST00000469858 EXOC4Q96A65 974 aa18.63■□□□□ 0.57
SMC4-211ENST00000469858 MYRFLQ96LU7 910 aa18.63■□□□□ 0.57
SMC4-211ENST00000469858 RAD9AQ99638 391 aa18.63■□□□□ 0.57
SMC4-211ENST00000469858 BRD8Q9H0E9 1235 aa18.63■□□□□ 0.57
SMC4-211ENST00000469858 PRDM10Q9NQV6 1147 aa18.63■□□□□ 0.57
SMC4-211ENST00000469858 TRPM5Q9NZQ8 1165 aa18.63■□□□□ 0.57
SMC4-211ENST00000469858 DNMT3LQ9UJW3 386 aa18.63■□□□□ 0.57
SMC4-211ENST00000469858 NYNRINQ9P2P1 1898 aaKnown RBP18.63■□□□□ 0.57
SMC4-211ENST00000469858 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.62■□□□□ 0.57
SMC4-211ENST00000469858 E7ESA3 106 aa18.62■□□□□ 0.57
SMC4-211ENST00000469858 RASGRF2O14827 1237 aa18.62■□□□□ 0.57
SMC4-211ENST00000469858 EIF3HO15372 352 aaKnown RBP eCLIP18.62■□□□□ 0.578e-6■□□□□ 10.6
SMC4-211ENST00000469858 ATP2A2P16615 1042 aaKnown RBP18.62■□□□□ 0.57
SMC4-211ENST00000469858 MAGEA6P43360 314 aa18.62■□□□□ 0.57
SMC4-211ENST00000469858 LONRF1Q17RB8 773 aa18.62■□□□□ 0.57
SMC4-211ENST00000469858 DNAJC21Q5F1R6 531 aaKnown RBP18.62■□□□□ 0.57
SMC4-211ENST00000469858 HECTD3Q5T447 861 aa18.62■□□□□ 0.57
SMC4-211ENST00000469858 SNX30Q5VWJ9 437 aa18.62■□□□□ 0.57
SMC4-211ENST00000469858 RAP1GAP2Q684P5 730 aa18.62■□□□□ 0.57
SMC4-211ENST00000469858 TMC7Q7Z402 723 aa18.62■□□□□ 0.57
SMC4-211ENST00000469858 GPR65Q8IYL9 337 aa18.62■□□□□ 0.57
SMC4-211ENST00000469858 RTL3Q8N8U3 475 aaKnown RBP18.62■□□□□ 0.57
SMC4-211ENST00000469858 PYROXD1Q8WU10 500 aa18.62■□□□□ 0.57
SMC4-211ENST00000469858 HERVK_113Q902F9 699 aa18.62■□□□□ 0.57
SMC4-211ENST00000469858 TRMT2BQ96GJ1 504 aaKnown RBP18.62■□□□□ 0.57
SMC4-211ENST00000469858 SERPINB12Q96P63 405 aa18.62■□□□□ 0.57
SMC4-211ENST00000469858 RXFP1Q9HBX9 757 aa18.62■□□□□ 0.57
SMC4-211ENST00000469858 NDFIP2Q9NV92 336 aa18.62■□□□□ 0.57
SMC4-211ENST00000469858 KLHL8Q9P2G9 620 aaPredicted RBP18.62■□□□□ 0.57
SMC4-211ENST00000469858 PTPN3P26045 913 aa18.62■□□□□ 0.57
SMC4-211ENST00000469858 FDFT1P37268 417 aa18.62■□□□□ 0.57
SMC4-211ENST00000469858 IRAK1P51617 712 aa18.62■□□□□ 0.57
SMC4-211ENST00000469858 KCNQ1P51787 676 aa18.62■□□□□ 0.57
SMC4-211ENST00000469858 KPNA1P52294 538 aaPredicted RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms